##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921405_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2475324 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3902305314375 33.0 31.0 34.0 29.0 34.0 2 31.52189006368459 34.0 31.0 34.0 28.0 34.0 3 31.59116665131514 34.0 31.0 34.0 28.0 34.0 4 35.08829308809675 37.0 35.0 37.0 32.0 37.0 5 34.827154748226896 37.0 35.0 37.0 32.0 37.0 6 34.78829801674448 37.0 35.0 37.0 32.0 37.0 7 34.65516877790544 37.0 35.0 37.0 32.0 37.0 8 34.618174428882845 37.0 35.0 37.0 32.0 37.0 9 36.23872066848622 39.0 37.0 39.0 32.0 39.0 10-11 36.09045139141381 39.0 37.0 39.0 32.0 39.0 12-13 36.02890651890419 39.0 37.0 39.0 31.0 39.0 14-15 37.26764738676634 40.0 38.0 41.0 31.0 41.0 16-17 37.24732216873427 40.0 38.0 41.0 31.0 41.0 18-19 37.21923978436762 40.0 38.0 41.0 31.0 41.0 20-21 37.18656810179193 40.0 38.0 41.0 31.0 41.0 22-23 37.077267056757016 40.0 38.0 41.0 31.0 41.0 24-25 37.01381233325415 40.0 37.0 41.0 31.0 41.0 26-27 36.872780694567666 40.0 37.0 41.0 30.0 41.0 28-29 36.716117566831656 40.0 37.0 41.0 30.0 41.0 30-31 36.566040243620634 40.0 37.0 41.0 30.0 41.0 32-33 36.49673759879515 40.0 36.5 41.0 30.0 41.0 34-35 36.609076023987164 40.0 37.0 41.0 30.0 41.0 36-37 36.56943495073776 40.0 37.0 41.0 30.0 41.0 38-39 36.46673061789083 40.0 37.0 41.0 30.0 41.0 40-41 36.33015193162592 40.0 36.5 41.0 29.5 41.0 42-43 36.204415260386114 40.0 36.0 41.0 29.0 41.0 44-45 36.04391122131891 40.0 36.0 41.0 28.0 41.0 46-47 35.861966958668845 40.0 36.0 41.0 27.5 41.0 48-49 35.67765674311727 40.0 35.0 41.0 27.0 41.0 50-51 35.51584944031569 40.0 35.0 41.0 26.0 41.0 52-53 35.34039422717996 39.0 35.0 41.0 26.0 41.0 54-55 35.13070369777856 39.0 35.0 41.0 26.0 41.0 56-57 34.862577989790424 39.0 35.0 41.0 25.0 41.0 58-59 34.63980291064927 38.5 35.0 40.5 24.0 41.0 60-61 34.37209048189247 38.0 34.0 40.0 23.5 41.0 62-63 34.08388154439581 37.5 34.0 40.0 23.0 41.0 64-65 33.77326160130957 37.0 34.0 40.0 22.5 41.0 66-67 33.441293341800915 36.5 34.0 39.5 22.0 41.0 68-69 33.0813600562997 36.0 33.5 39.0 21.5 41.0 70-71 32.70665739111324 35.5 33.0 39.0 20.0 40.0 72-73 32.3159636879859 35.0 33.0 37.5 19.0 40.0 74-75 31.913088145228667 35.0 33.0 37.0 17.5 39.0 76-77 29.15461410304267 33.0 28.5 34.5 9.0 36.5 78-79 30.802936706467516 34.5 31.5 36.0 11.0 38.0 80-81 30.994390229319475 35.0 32.0 36.0 11.0 37.0 82-83 30.828118662445803 35.0 32.0 35.0 8.5 37.0 84-85 30.58745340003975 35.0 32.0 35.0 6.5 36.5 86-87 30.332951363134683 35.0 32.0 35.0 2.0 36.0 88-89 30.04353531093303 35.0 31.0 35.0 2.0 36.0 90-91 29.849963883515855 34.0 31.0 35.0 2.0 35.5 92-93 29.69706410150752 34.0 31.0 35.0 2.0 35.0 94-95 29.589507272583305 34.0 31.0 35.0 2.0 35.0 96-97 29.390947003301385 34.0 31.0 35.0 2.0 35.0 98-99 29.112907239617925 34.0 31.0 35.0 2.0 35.0 100-101 28.032518369312463 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 46515.0 3 15168.0 4 8193.0 5 5880.0 6 5191.0 7 5319.0 8 5696.0 9 6043.0 10 6904.0 11 7577.0 12 8097.0 13 9056.0 14 10062.0 15 11447.0 16 12935.0 17 14256.0 18 12744.0 19 10752.0 20 9650.0 21 9402.0 22 10103.0 23 11095.0 24 12756.0 25 15427.0 26 18508.0 27 22408.0 28 26733.0 29 32220.0 30 39195.0 31 48718.0 32 61103.0 33 79993.0 34 113743.0 35 171188.0 36 299732.0 37 575985.0 38 626323.0 39 89204.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.334876403967016 20.049452170137798 13.818446363493278 25.797225062401907 2 15.331382066524867 21.02079937300909 37.57723764450181 26.070580915964232 3 18.082158795519316 24.25820897090206 29.41779878294638 28.241833450632242 4 13.341475367250036 17.062516841930478 34.96128224510054 34.63472554571895 5 14.261318083070398 36.894776741840374 34.26278093156779 14.58112424352144 6 33.58631368998635 35.26090467747024 16.700016280914042 14.452765351629365 7 28.600140587883587 31.94871774154453 20.849667921723253 18.601473748848633 8 26.215133293795784 35.155885142876535 19.625667196168198 19.003314367159486 9 26.09682611246043 15.972292920037942 19.791994906525368 38.13888606097626 10-11 25.448995789037344 25.610599695678328 27.698226138299542 21.24217837698479 12-13 25.93466778813874 23.217057363942732 27.43098058512078 23.41729426279775 14-15 23.142789038417252 24.934429276136377 24.894270742852065 27.02851094259431 16-17 23.09704478732253 27.914278592554258 25.965258647262313 23.023417972860894 18-19 23.09847274260959 26.908122365617853 27.544403863824446 22.44900102794811 20-21 23.572510399720116 26.079451962928236 27.58920408660421 22.758833550747443 22-23 23.43045828684938 25.940076753821177 27.25847381536866 23.370991143960783 24-25 23.21904346368196 26.27467140147498 27.25635633876503 23.249928796078027 26-27 23.005536780910326 26.47851846165966 27.328669859590793 23.18727489783922 28-29 23.124778298414576 26.636895022329742 27.229944238263652 23.00838244099203 30-31 23.39748109365675 26.23659424403516 27.113496242166047 23.25242842014204 32-33 23.147973248025473 26.299199077155873 26.953210307651748 23.59961736716691 34-35 23.551845328149806 26.41970036207781 26.95450401319908 23.0739502965733 36-37 23.4792397552143 26.28472901150079 26.95648379918782 23.27954743409709 38-39 23.26476510819508 26.406540082385295 27.13478921214445 23.19390559727518 40-41 23.5046497140036 26.209980098626133 27.08673540707319 23.198634780297077 42-43 23.441637107511692 26.202067252052068 26.822642848037965 23.53365279239827 44-45 23.40335401106853 26.313407883073424 26.7682938161532 23.514944289704847 46-47 23.533057492292222 26.428156149031736 26.533020726056396 23.505765632619653 48-49 23.315241962821446 26.552517162425165 26.63350611245363 23.498734762299755 50-51 23.3311166666936 26.611715958545375 26.647147610605742 23.410019764155287 52-53 23.694235427982292 26.368413961471482 26.505125574504902 23.432225036041327 54-55 23.231622367968953 26.373647461104188 26.672621504032744 23.722108666894115 56-57 23.306774920379304 26.52315615918564 26.48952214653279 23.680546773902268 58-59 23.21399964970978 26.444831007189435 26.65027804033832 23.690891302762466 60-61 23.149848583618994 26.456343579737375 26.813577557690436 23.58023027895319 62-63 23.272070856246994 26.3573036159475 26.762961286855468 23.60766424095003 64-65 23.11208532922093 26.24553286915181 26.679081481517404 23.96330032010986 66-67 23.001007513309236 26.507279111901067 26.51810998100961 23.973603393780092 68-69 23.118947633849125 26.307840455950977 26.637523174975712 23.935688735224183 70-71 22.964063307359083 26.199450796272654 26.70567283518897 24.13081306117929 72-73 23.04824489180707 26.26486734730782 26.54472210812201 24.142165652763097 74-75 22.970221332683554 26.402084138989473 26.42436974959702 24.20332477872995 76-77 23.012487828148952 26.206316747758347 26.53454416379864 24.246651260294062 78-79 22.923275573158193 26.253254846441592 26.52936850824642 24.294101072153794 80-81 22.948828482307896 26.352751582146094 26.397052076929263 24.30136785861675 82-83 22.898927153864584 26.33034981548146 26.487250178699938 24.28347285195402 84-85 22.892683185069668 26.26148044903826 26.470206701628147 24.375629664263922 86-87 22.820631833110085 26.413218870168837 26.294998307958096 24.471150988762982 88-89 22.684746762278714 26.3326968737874 26.319289908808337 24.66326645512555 90-91 22.585612274672545 26.278368564388536 26.41634110361821 24.71967805732071 92-93 22.62389961155093 26.118789306444302 26.606427184038285 24.650883897966487 94-95 22.543451618266115 25.97732179134941 26.624523194228495 24.85470339615598 96-97 22.534000893707766 25.890596755986266 26.543504417227386 25.03189793307858 98-99 22.368588496653132 25.980094509870938 26.428000357128862 25.22331663634707 100-101 22.196627022161643 26.011169194080452 26.49543558624735 25.296768197510556 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 88.0 1 67.0 2 69.5 3 93.0 4 85.0 5 103.5 6 170.5 7 391.0 8 589.5 9 619.5 10 555.0 11 475.5 12 472.0 13 498.0 14 567.0 15 660.5 16 751.5 17 843.5 18 967.5 19 1149.0 20 1310.5 21 1462.0 22 1802.0 23 2279.5 24 2800.0 25 3681.5 26 5158.5 27 7178.5 28 9935.5 29 13680.0 30 18309.0 31 23656.0 32 30605.5 33 35367.0 34 38214.5 35 43317.5 36 49772.5 37 56100.5 38 61780.5 39 66657.5 40 70324.0 41 74167.5 42 78530.5 43 83349.5 44 88471.5 45 94213.0 46 98052.5 47 100312.5 48 103506.5 49 105450.0 50 104724.0 51 102288.5 52 100550.5 53 99254.0 54 96437.0 55 91523.0 56 84158.5 57 75063.5 58 67303.5 59 59202.5 60 48802.5 61 39853.5 62 32791.0 63 25208.5 64 17897.0 65 12784.5 66 9571.0 67 7356.5 68 5703.0 69 4320.0 70 3281.5 71 2497.5 72 1759.5 73 1286.0 74 995.5 75 742.5 76 528.5 77 323.5 78 201.0 79 113.0 80 65.5 81 38.0 82 22.0 83 14.0 84 10.5 85 9.5 86 6.0 87 3.5 88 4.5 89 4.0 90 2.0 91 0.5 92 1.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15533320082542731 2 3.635887665614683E-4 3 0.006706192805467082 4 0.004161071439536804 5 0.028279126288114204 6 0.0013331588107253838 7 1.615950073606526E-4 8 0.0016159500736065257 9 0.0 10-11 0.10550134043058605 12-13 2.4239251104097887E-4 14-15 0.005413432746581862 16-17 1.2119625552048943E-4 18-19 1.8179438328073415E-4 20-21 6.867787812827735E-4 22-23 3.029906388012236E-4 24-25 0.0015755513217663626 26-27 0.0023835263585696258 28-29 0.006059812776024472 30-31 0.014583949414298896 32-33 0.014806142549419792 34-35 0.012261021183489516 36-37 6.463800294426104E-4 38-39 1.4139563144057102E-4 40-41 0.0047670527171392515 42-43 0.008180747247633038 44-45 0.007998952864352303 46-47 0.009170516667717035 48-49 0.011917631792848129 50-51 0.005494230250262188 52-53 0.0016361494495266075 54-55 0.0010301681719241604 56-57 0.006100211527864635 58-59 0.009433108554678096 60-61 0.007897955984751895 62-63 0.01834103333543407 64-65 0.034783325334380465 66-67 0.036964857933749276 68-69 0.027147961236589635 70-71 0.04098453374184551 72-73 0.026158191816505638 74-75 0.025572409914823273 76-77 0.24237231166505882 78-79 0.06887987188747817 80-81 0.052962763662453886 82-83 0.02040136967928239 84-85 0.03195541270556905 86-87 0.08002992739536319 88-89 0.26089513938377357 90-91 0.3152718593606332 92-93 0.05068023418348466 94-95 0.005191239611460964 96-97 0.009776497945319481 98-99 0.0010907662996844049 100-101 0.0013533581866454654 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2475324.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.59395497335994 #Duplication Level Percentage of deduplicated Percentage of total 1 80.52706882805998 51.21034789188303 2 11.231643912664508 14.285293145175979 3 3.3546450806120234 6.400054446241333 4 1.5576029482640292 3.9621652703310155 5 0.8670207187012353 2.7568638273028268 6 0.5533448649343078 2.1113633055223384 7 0.35997854206306934 1.602472143673421 8 0.2714095349293602 1.3808004594910634 9 0.20827382850485562 1.192046082486037 >10 1.0154778688975898 11.128424209725626 >50 0.03922215527641951 1.676550346757091 >100 0.012846441377047766 1.4318816720232392 >500 0.0011467375165891544 0.5375830229750087 >1k 3.1853819905127356E-4 0.3241541764119652 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.039875184016315E-5 0.0 3 0.0 0.0 0.0 4.039875184016315E-5 0.0 4 0.0 0.0 0.0 8.07975036803263E-5 0.0 5 0.0 0.0 0.0 1.2119625552048943E-4 0.0 6 0.0 0.0 0.0 1.2119625552048943E-4 8.07975036803263E-5 7 0.0 0.0 0.0 1.2119625552048943E-4 1.2119625552048943E-4 8 0.0 0.0 0.0 1.2119625552048943E-4 1.2119625552048943E-4 9 0.0 0.0 0.0 1.615950073606526E-4 1.2119625552048943E-4 10-11 0.0 0.0 0.0 1.615950073606526E-4 1.2119625552048943E-4 12-13 0.0 0.0 0.0 2.0199375920081574E-4 2.0199375920081574E-4 14-15 0.0 0.0 0.0 2.0199375920081574E-4 2.4239251104097887E-4 16-17 0.0 0.0 0.0 2.0199375920081574E-4 2.4239251104097887E-4 18-19 0.0 0.0 0.0 2.4239251104097887E-4 2.8279126288114205E-4 20-21 0.0 0.0 0.0 2.4239251104097887E-4 2.8279126288114205E-4 22-23 0.0 0.0 0.0 4.2418689432171305E-4 2.8279126288114205E-4 24-25 0.0 0.0 0.0 6.867787812827735E-4 2.8279126288114205E-4 26-27 0.0 0.0 0.0 0.0011109656756044866 3.029906388012236E-4 28-29 0.0 0.0 0.0 0.0036156882896946014 3.231900147213052E-4 30-31 0.0 0.0 0.0 0.014947538180860365 3.231900147213052E-4 32-33 0.0 0.0 0.0 0.04324686384489465 3.231900147213052E-4 34-35 0.0 0.0 0.0 0.08134288683016849 3.231900147213052E-4 36-37 0.0 0.0 0.0 0.13200292163773308 3.231900147213052E-4 38-39 0.0 0.0 0.0 0.20138777792321327 3.635887665614683E-4 40-41 0.0 0.0 0.0 0.27790301390848227 3.635887665614683E-4 42-43 0.0 0.0 0.0 0.366234884806999 3.635887665614683E-4 44-45 0.0 0.0 0.0 0.4888854953937343 3.635887665614683E-4 46-47 0.0 0.0 0.0 0.6299781361955041 4.039875184016315E-4 48-49 0.0 0.0 0.0 0.7617790640740363 4.039875184016315E-4 50-51 0.0 0.0 0.0 0.896912888979382 4.039875184016315E-4 52-53 0.0 0.0 0.0 1.042994775633412 4.8478502208195774E-4 54-55 0.0 0.0 0.0 1.2298996010219267 5.251837739221209E-4 56-57 0.0 0.0 0.0 1.4606774709088588 5.251837739221209E-4 58-59 0.0 0.0 0.0 1.6862439018084099 5.251837739221209E-4 60-61 0.0 0.0 0.0 1.9005794796963953 5.251837739221209E-4 62-63 0.0 0.0 0.0 2.134023667204778 5.655825257622841E-4 64-65 0.0 0.0 0.0 2.4124114661353424 5.655825257622841E-4 66-67 0.0 0.0 0.0 2.7585883706537 5.655825257622841E-4 68-69 0.0 0.0 0.0 3.117389885122109 5.655825257622841E-4 70-71 0.0 0.0 0.0 3.4670208829228013 5.655825257622841E-4 72-73 0.0 0.0 0.0 3.827256553081536 6.665794053626919E-4 74-75 0.0 0.0 0.0 4.243202102027856 6.867787812827735E-4 76-77 0.0 0.0 0.0 4.742712469155553 7.06978157202855E-4 78-79 0.0 0.0 0.0 5.287388640840552 7.271775331229366E-4 80-81 0.0 0.0 0.0 5.810431280915145 7.271775331229366E-4 82-83 0.0 0.0 0.0 6.335675652965026 8.483737886434261E-4 84-85 0.0 0.0 0.0 6.903944695724681 8.483737886434261E-4 86-87 0.0 0.0 0.0 7.5734530105957845 8.685731645635077E-4 88-89 0.0 0.0 0.0 8.308912287845954 9.695700441639155E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2510 0.0 56.798714 1 GTATCAA 4490 0.0 41.70046 1 TCAACGC 5785 0.0 32.078285 4 CAACGCA 5875 0.0 31.40226 5 ATCAACG 5980 0.0 30.952887 3 AACGCAG 6190 0.0 29.879246 6 TATCAAC 6220 0.0 29.529652 2 ACGCAGA 7080 0.0 25.51833 7 CGCAGAG 7555 0.0 23.78807 8 GTACATG 5960 0.0 21.289034 1 GCAGAGT 8410 0.0 20.35206 9 GTGGTAT 1195 0.0 19.48584 1 TACATGG 6380 0.0 19.34151 2 AGAGTAC 7255 0.0 18.775396 10-11 TGGTATC 1215 0.0 18.750061 2 ACATGGG 6335 0.0 18.579876 3 CAGAGTA 7930 0.0 18.34637 10-11 GAGTACT 4705 0.0 18.001234 12-13 GTATAGA 740 0.0 17.98114 1 GTCCTAA 725 0.0 17.697695 1 >>END_MODULE