##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921404_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3829041 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.367618419337898 31.0 31.0 34.0 26.0 34.0 2 30.428036941887015 31.0 31.0 34.0 26.0 34.0 3 30.476549350085307 33.0 31.0 34.0 26.0 34.0 4 33.93187745965635 37.0 35.0 37.0 30.0 37.0 5 33.925952477395775 37.0 35.0 37.0 30.0 37.0 6 33.971240057236265 37.0 35.0 37.0 30.0 37.0 7 33.8897201675302 37.0 35.0 37.0 30.0 37.0 8 33.853114918330725 37.0 35.0 37.0 29.0 37.0 9 35.41827209476211 39.0 37.0 39.0 30.0 39.0 10-11 35.31280704489714 39.0 36.0 39.0 29.0 39.0 12-13 35.20756502737892 39.0 35.0 39.0 29.0 39.0 14-15 36.34525106939309 40.0 37.0 41.0 28.0 41.0 16-17 36.29637551543585 40.0 37.0 41.0 28.0 41.0 18-19 36.252863314861344 40.0 37.0 41.0 27.0 41.0 20-21 36.19571336530478 40.0 37.0 41.0 27.0 41.0 22-23 36.081172152505026 40.0 36.5 41.0 27.0 41.0 24-25 35.99032708189857 40.0 36.0 41.0 27.0 41.0 26-27 35.85022868650401 40.0 36.0 41.0 27.0 41.0 28-29 35.71545734297439 40.0 36.0 41.0 26.5 41.0 30-31 35.57781948534894 40.0 36.0 41.0 25.5 41.0 32-33 35.408863342022194 40.0 35.5 41.0 25.0 41.0 34-35 35.2508506699197 39.0 35.0 41.0 25.0 41.0 36-37 35.08929154845822 39.0 35.0 41.0 24.0 41.0 38-39 35.314229333141114 39.5 35.0 41.0 25.0 41.0 40-41 35.43776183122615 40.0 35.0 41.0 25.0 41.0 42-43 35.28549276437625 40.0 35.0 41.0 24.0 41.0 44-45 35.175559624459495 40.0 35.0 41.0 24.0 41.0 46-47 35.04135408839968 40.0 35.0 41.0 23.0 41.0 48-49 34.90878407935564 40.0 35.0 41.0 22.5 41.0 50-51 33.222057167839154 37.0 32.5 39.5 18.5 40.0 52-53 33.381368729141315 37.5 33.5 39.5 19.0 40.0 54-55 34.25027611352294 39.0 34.0 40.5 19.5 41.0 56-57 34.28223411553964 39.0 34.0 41.0 20.0 41.0 58-59 34.11864759348359 39.0 34.0 41.0 18.5 41.0 60-61 33.89451340427016 38.0 34.0 41.0 18.0 41.0 62-63 33.621620139350824 38.0 34.0 40.0 15.0 41.0 64-65 33.34428346418855 37.0 34.0 40.0 13.0 41.0 66-67 33.01628645397111 37.0 33.0 40.0 11.0 41.0 68-69 32.6596054991315 36.0 33.0 39.0 8.0 41.0 70-71 32.28122642196832 35.5 33.0 39.0 7.0 41.0 72-73 31.921195542173614 35.0 32.0 38.5 2.0 40.0 74-75 31.524208933777416 35.0 32.0 37.0 2.0 39.5 76-77 31.139342853732828 35.0 32.0 37.0 2.0 39.0 78-79 30.7862106987102 35.0 32.0 36.0 2.0 39.0 80-81 30.429323556472756 35.0 31.0 36.0 2.0 37.5 82-83 30.12521477309854 35.0 31.0 35.5 2.0 37.0 84-85 29.88384258617236 35.0 31.0 35.0 2.0 37.0 86-87 29.654487376865383 35.0 31.0 35.0 2.0 36.0 88-89 29.45630315789254 35.0 31.0 35.0 2.0 36.0 90-91 29.208815732189862 35.0 31.0 35.0 2.0 36.0 92-93 29.027859586773815 34.5 30.5 35.0 2.0 35.0 94-95 28.831441214654006 34.0 30.0 35.0 2.0 35.0 96-97 28.595744730860808 34.0 30.0 35.0 2.0 35.0 98-99 28.378219507182084 34.0 30.0 35.0 2.0 35.0 100-101 27.347826257279564 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 135280.0 3 22594.0 4 15310.0 5 11579.0 6 10310.0 7 10556.0 8 11099.0 9 12017.0 10 13124.0 11 13980.0 12 14064.0 13 14307.0 14 15301.0 15 16526.0 16 16425.0 17 17226.0 18 16218.0 19 15316.0 20 15150.0 21 15991.0 22 17554.0 23 20030.0 24 23429.0 25 27774.0 26 33212.0 27 39157.0 28 46349.0 29 55237.0 30 65801.0 31 80441.0 32 100336.0 33 129767.0 34 178902.0 35 261481.0 36 434237.0 37 799752.0 38 924569.0 39 178626.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.575341187881776 18.165600861458735 13.298259705978344 24.960798244681143 2 15.872058929596191 19.478956627541244 39.53057856077402 25.118405882088542 3 19.102922147827776 23.32176131577132 29.566966497415244 28.008350038985665 4 13.409293073730181 15.980133606357747 36.68206348758377 33.92850983232831 5 14.362960653886365 36.90956071811276 34.59824665600756 14.12923197199332 6 33.459070540741386 35.222334396888485 17.163324717796545 14.155270344573584 7 28.876851001497204 31.743637402741776 20.954517577265893 18.424994018495127 8 26.383939894765685 34.755326171256144 19.989478135916467 18.87125579806171 9 26.463576906258666 15.767040779383207 19.58624523216565 38.183137082192474 10-11 25.45484941969965 25.265895893359524 28.064267969980587 21.214986716960237 12-13 25.967942392179634 22.858852088681875 27.629561756578745 23.54364376255975 14-15 23.20456409727826 24.473914787788576 24.98486877541004 27.336652339523127 16-17 23.389589103507586 27.487176955145337 25.916827460882985 23.20640648046409 18-19 23.409928572613403 26.87912070401566 27.118661777799662 22.59228894557128 20-21 23.962652769844684 26.102713895415686 27.04611246305696 22.88852087168267 22-23 23.750360906833127 26.027921450995713 26.587160469956224 23.634557172214944 24-25 23.525083842729956 26.206261476447224 26.66896413339172 23.599690547431106 26-27 23.45767930450793 26.381051166714148 26.679386406441015 23.48188312233691 28-29 23.44529859150846 26.606140481368374 26.56635797128006 23.382202955843113 30-31 23.795992780632034 26.2014083513774 26.548298459746277 23.45430040824429 32-33 23.493978814422007 26.241746686431476 26.461678336673682 23.802596162472824 34-35 23.879333581284946 26.31839651224017 26.466031325482458 23.33623858099242 36-37 23.85412784543572 26.33060789248738 26.407247041838527 23.408017220238378 38-39 23.672168449062035 26.364821048532438 26.523369853579048 23.439640648826476 40-41 23.86809839224038 26.163784136930207 26.554914799931417 23.413202670897995 42-43 23.71815777172061 26.145647554829903 26.43350553860956 23.702689134839925 44-45 23.691975495927743 26.26753807026571 26.44702858097568 23.593457852830866 46-47 23.825175678853025 26.26929909413864 26.179554274811746 23.72597095219659 48-49 23.538435048564878 26.366078535941256 26.387719332217884 23.707767083275982 50-51 23.698404989399567 26.337182739323552 26.406984405771283 23.557427865505602 52-53 23.860339561599464 26.221221533594573 26.42039101960463 23.498047885201338 54-55 23.526965036648583 26.050365962480015 26.6283040641854 23.794364936686005 56-57 23.561720018686184 26.292951723434015 26.40327610144452 23.742052156435285 58-59 23.569481326166553 26.197499757271963 26.573329121685653 23.659689794875835 60-61 23.65003582212597 26.124988141077022 26.6655980005038 23.55937803629321 62-63 23.57628745445469 26.125804178555285 26.724970770526223 23.572937596463806 64-65 23.4215538420772 26.016023239913505 26.678413116942174 23.884009801067123 66-67 23.417975419906657 26.208900699615455 26.509092907414463 23.864030973063432 68-69 23.557550899501027 26.143740651459186 26.5466634148486 23.75204503419119 70-71 23.416520050878262 25.91659559905386 26.643284015745937 24.023600334321934 72-73 23.438443811085037 25.952028803389005 26.622856279383456 23.986671106142506 74-75 23.3971805291826 26.115311159901626 26.56345300790391 23.92405530301187 76-77 23.421480709508494 25.877995958509175 26.658467336689988 24.04205599529234 78-79 23.3645406486798 25.9077248574223 26.68951730993151 24.03821718396639 80-81 23.39599603464127 26.069197472901745 26.583411582642725 23.951394909814265 82-83 23.43772533908666 26.096710203105193 26.612109360992985 23.85345509681516 84-85 23.453193670030004 26.024534601058207 26.64313412241599 23.8791376064958 86-87 23.33822500027486 26.07580897054581 26.616776201263736 23.969189827915592 88-89 23.356912173238705 25.927849927849927 26.637479426595075 24.077758472316297 90-91 23.294645152272054 25.920435620943604 26.729790728343684 24.05512849844066 92-93 23.32762184212803 25.81711387193424 26.892013811765285 23.96325047417244 94-95 23.268390207492757 25.730942327430697 26.912377766121754 24.088289698954792 96-97 23.305223912150215 25.672609565807814 26.8991334692007 24.12303305284127 98-99 23.20774994787374 25.578699658892035 26.85785780636727 24.355692586866954 100-101 23.34616200728932 25.440790680206828 27.025902698864847 24.18714461363901 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 23.5 2 33.5 3 67.5 4 85.5 5 100.5 6 158.5 7 302.5 8 480.5 9 585.0 10 567.5 11 510.0 12 528.5 13 614.5 14 715.5 15 826.5 16 938.0 17 1020.0 18 1144.0 19 1326.0 20 1455.0 21 1560.5 22 1733.0 23 1996.0 24 2365.5 25 2909.0 26 3859.0 27 5492.5 28 8008.5 29 11982.0 30 17640.0 31 25260.0 32 35244.0 33 44125.0 34 52212.5 35 61669.5 36 73530.5 37 85908.5 38 96931.5 39 107413.0 40 116193.0 41 124497.0 42 132969.0 43 141576.0 44 150513.0 45 160172.5 46 165835.0 47 168166.0 48 171337.5 49 172827.5 50 169820.5 51 164009.5 52 159122.5 53 153906.0 54 147766.0 55 138724.5 56 125629.5 57 111724.0 58 99740.5 59 87311.0 60 71722.5 61 57932.5 62 47233.5 63 36011.5 64 25858.0 65 18961.5 66 14269.0 67 10986.5 68 8372.0 69 6262.5 70 4818.5 71 3584.0 72 2604.0 73 1914.0 74 1422.5 75 1043.0 76 730.5 77 517.5 78 367.0 79 250.0 80 180.5 81 138.0 82 98.0 83 91.0 84 84.5 85 58.0 86 45.5 87 47.5 88 43.5 89 34.0 90 28.0 91 26.5 92 27.0 93 24.5 94 20.5 95 14.0 96 9.0 97 8.0 98 7.0 99 7.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.053381512498821504 2 0.061973742250344147 3 0.052049586306336236 4 0.05946658706448951 5 0.051031054512082785 6 0.017915713098919546 7 0.014964582515569825 8 0.021467516278880272 9 0.02044898448462683 10-11 0.02222488607460719 12-13 0.028427483539612136 14-15 0.044149435850908886 16-17 0.03047760522804535 18-19 0.023178127369229005 20-21 0.026625465749779125 22-23 0.048993990923575904 24-25 0.04275221915879198 26-27 0.02957659633312884 28-29 0.018947302993099317 30-31 0.011778406133546233 32-33 0.009179844248207319 34-35 0.008801159350343857 36-37 0.0015147395914538392 38-39 0.006568224262942079 40-41 0.0036954422791503146 42-43 0.21955889216124874 44-45 0.19301177501102756 46-47 0.1998019869727172 48-49 0.1973078898867889 50-51 0.19584538269504034 52-53 0.20037654336947552 54-55 0.19877039707853744 56-57 0.2098697820159147 58-59 0.20610904923713275 60-61 0.2109797205096524 62-63 0.20849868152365042 64-65 0.20967391051701978 66-67 0.19994562607190675 68-69 0.19819584068177906 70-71 0.1821996682720295 72-73 0.18982559862900397 74-75 0.18960361093025643 76-77 0.18761877974145486 78-79 0.21263809920029583 80-81 0.22077329545439708 82-83 0.21963724076080668 84-85 0.21501467338688723 86-87 0.2334527104828598 88-89 0.23187268039177433 90-91 0.23084109049759458 92-93 0.23411867357910243 94-95 0.24459126972001607 96-97 0.24508747751721643 98-99 0.23477157857541875 100-101 0.24399059712340507 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3829041.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.79667837334631 #Duplication Level Percentage of deduplicated Percentage of total 1 75.64411840939009 44.47622900952234 2 13.54152282398613 15.923931243344816 3 4.69732858473801 8.285619540323003 4 2.0781002130330797 4.8874155941315385 5 1.133078498824205 3.331062603356042 6 0.7007913099318555 2.472252075413962 7 0.44498866380569835 1.8314698741898146 8 0.32090819954474303 1.5094668956801516 9 0.2314375881397326 1.2246985290019363 >10 1.1386739643754897 11.51735173315377 >50 0.049900300914521564 1.9924985522416405 >100 0.017638401552791384 1.785418324703611 >500 0.0010235282756929425 0.41432664296261607 >1k 4.895134878639372E-4 0.3482593819747444 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.61161998526524E-5 2 0.0 2.61161998526524E-5 0.0 0.0 2.61161998526524E-5 3 0.0 2.61161998526524E-5 0.0 2.61161998526524E-5 2.61161998526524E-5 4 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 2.61161998526524E-5 5 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 2.61161998526524E-5 6 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 2.61161998526524E-5 7 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 5.22323997053048E-5 8 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 5.22323997053048E-5 9 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 5.22323997053048E-5 10-11 0.0 2.61161998526524E-5 0.0 5.22323997053048E-5 5.22323997053048E-5 12-13 0.0 2.61161998526524E-5 0.0 1.044647994106096E-4 1.044647994106096E-4 14-15 0.0 2.61161998526524E-5 0.0 1.436390991895882E-4 1.566971991159144E-4 16-17 0.0 2.61161998526524E-5 0.0 1.566971991159144E-4 1.828133989685668E-4 18-19 0.0 2.61161998526524E-5 0.0 1.828133989685668E-4 1.828133989685668E-4 20-21 0.0 2.61161998526524E-5 0.0 2.089295988212192E-4 2.350457986738716E-4 22-23 0.0 5.22323997053048E-5 0.0 2.742200984528502E-4 2.481038986001978E-4 24-25 0.0 5.22323997053048E-5 0.0 3.656267979371336E-4 2.61161998526524E-4 26-27 0.0 5.22323997053048E-5 0.0 5.87614496684679E-4 3.26452498158155E-4 28-29 0.0 5.22323997053048E-5 0.0 0.0015408557913064915 3.395105980844812E-4 30-31 0.0 5.22323997053048E-5 0.0 0.006711863362131667 3.395105980844812E-4 32-33 0.0 5.22323997053048E-5 0.0 0.021454458178953945 3.656267979371336E-4 34-35 0.0 5.22323997053048E-5 0.0 0.042582463859749745 3.91742997789786E-4 36-37 0.0 5.22323997053048E-5 0.0 0.07364768358447976 3.91742997789786E-4 38-39 0.0 5.22323997053048E-5 0.0 0.12136198071527571 3.91742997789786E-4 40-41 0.0 5.22323997053048E-5 0.0 0.17589260600761392 3.91742997789786E-4 42-43 0.0 5.22323997053048E-5 0.0 0.23720038516171543 3.91742997789786E-4 44-45 0.0 5.22323997053048E-5 0.0 0.3187221030017699 3.91742997789786E-4 46-47 0.0 5.22323997053048E-5 0.0 0.41532592625673115 3.91742997789786E-4 48-49 0.0 5.22323997053048E-5 0.0 0.510832869117881 4.439753974950908E-4 50-51 1.30580999263262E-5 5.22323997053048E-5 0.0 0.6093170587622332 4.700915973477432E-4 52-53 2.61161998526524E-5 5.22323997053048E-5 0.0 0.715831979861276 4.831496972740694E-4 54-55 2.61161998526524E-5 9.14066994842834E-5 0.0 0.8491421220091402 4.962077972003956E-4 56-57 2.61161998526524E-5 1.044647994106096E-4 0.0 1.0064138775218128 4.962077972003956E-4 58-59 2.61161998526524E-5 1.30580999263262E-4 0.0 1.173191929780851 4.962077972003956E-4 60-61 2.61161998526524E-5 1.30580999263262E-4 0.0 1.3431039260222075 4.962077972003956E-4 62-63 2.61161998526524E-5 1.30580999263262E-4 0.0 1.5205635040209806 5.22323997053048E-4 64-65 2.61161998526524E-5 1.30580999263262E-4 0.0 1.7296759162411686 5.22323997053048E-4 66-67 2.61161998526524E-5 1.30580999263262E-4 0.0 1.9823762660154332 5.22323997053048E-4 68-69 2.61161998526524E-5 1.30580999263262E-4 0.0 2.252822573589575 5.22323997053048E-4 70-71 2.61161998526524E-5 1.30580999263262E-4 0.0 2.5296542920276903 5.614982968320265E-4 72-73 2.61161998526524E-5 1.30580999263262E-4 0.0 2.817559279203331 6.920792960952887E-4 74-75 2.61161998526524E-5 1.30580999263262E-4 0.0 3.1335652974204242 7.051373960216148E-4 76-77 5.22323997053048E-5 1.30580999263262E-4 0.0 3.5086853340039976 7.051373960216148E-4 78-79 5.22323997053048E-5 1.30580999263262E-4 0.0 3.9204333408809147 7.051373960216148E-4 80-81 5.22323997053048E-5 1.30580999263262E-4 0.0 4.3439597538913794 7.18195495947941E-4 82-83 5.22323997053048E-5 1.30580999263262E-4 0.0 4.768191304297865 7.83485995579572E-4 84-85 5.22323997053048E-5 1.30580999263262E-4 0.0 5.227810305504694 7.83485995579572E-4 86-87 5.22323997053048E-5 1.30580999263262E-4 0.0 5.745825129582054 7.965440955058983E-4 88-89 5.22323997053048E-5 1.30580999263262E-4 0.0 6.312298562486012 8.096021954322244E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3285 0.0 50.27108 1 GTATCAA 5305 0.0 36.13852 1 TCAACGC 5955 0.0 31.480024 4 CAACGCA 6055 0.0 30.880129 5 ATCAACG 6085 0.0 30.649897 3 TATCAAC 6445 0.0 29.01189 2 AACGCAG 6495 0.0 28.778395 6 GTACATG 8980 0.0 25.999388 1 TACATGG 9395 0.0 23.8928 2 ACGCAGA 7675 0.0 23.553972 7 ACATGGG 9395 0.0 22.579159 3 CGCAGAG 7995 0.0 21.66337 8 CATGGGG 8370 0.0 19.448603 4 GTATTAG 1090 0.0 18.28509 1 GAGTACA 7045 0.0 17.378529 1 GCAGAGT 9605 0.0 17.143103 9 CAGAGTA 8565 0.0 16.870415 10-11 ATGGGGG 4660 0.0 16.395964 5 GAGTACT 3950 0.0 15.978237 12-13 AGAGTAC 7575 0.0 15.974356 10-11 >>END_MODULE