##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921403_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3953771 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.368337468204405 33.0 31.0 34.0 29.0 34.0 2 31.5027514238938 34.0 31.0 34.0 28.0 34.0 3 31.578483933439745 34.0 31.0 34.0 28.0 34.0 4 35.05834328796483 37.0 35.0 37.0 32.0 37.0 5 34.79213287770081 37.0 35.0 37.0 32.0 37.0 6 34.74352586429512 37.0 35.0 37.0 32.0 37.0 7 34.610829256423806 37.0 35.0 37.0 32.0 37.0 8 34.57291709610901 37.0 35.0 37.0 32.0 37.0 9 36.190677204117286 39.0 37.0 39.0 32.0 39.0 10-11 36.03881939545816 39.0 37.0 39.0 31.5 39.0 12-13 35.97000597657274 39.0 37.0 39.0 31.0 39.0 14-15 37.221368789441776 40.0 38.0 41.0 31.0 41.0 16-17 37.198377321296554 40.0 38.0 41.0 31.0 41.0 18-19 37.15380152264762 40.0 38.0 41.0 31.0 41.0 20-21 37.11143905400692 40.0 38.0 41.0 31.0 41.0 22-23 37.004664913572384 40.0 38.0 41.0 31.0 41.0 24-25 36.937080700930835 40.0 37.0 41.0 30.5 41.0 26-27 36.80188268364556 40.0 37.0 41.0 30.0 41.0 28-29 36.652580283481264 40.0 37.0 41.0 30.0 41.0 30-31 36.52198584591773 40.0 37.0 41.0 30.0 41.0 32-33 36.480418946873755 40.0 37.0 41.0 30.0 41.0 34-35 36.616968838104185 40.0 37.0 41.0 30.0 41.0 36-37 36.59845625859464 40.0 37.0 41.0 30.0 41.0 38-39 36.51381529178093 40.0 37.0 41.0 30.0 41.0 40-41 36.39671670412879 40.0 37.0 41.0 29.5 41.0 42-43 36.3015613448528 40.0 36.5 41.0 29.0 41.0 44-45 36.17233610646646 40.0 36.0 41.0 28.5 41.0 46-47 36.0265849994853 40.0 36.0 41.0 28.0 41.0 48-49 35.87627697709351 40.0 35.5 41.0 28.0 41.0 50-51 35.71774680425346 40.0 35.0 41.0 27.5 41.0 52-53 35.542345649254855 39.0 35.0 41.0 27.0 41.0 54-55 35.32847944405481 39.0 35.0 41.0 26.5 41.0 56-57 35.05638831889859 39.0 35.0 41.0 26.0 41.0 58-59 34.82630809928041 38.5 35.0 40.5 26.0 41.0 60-61 34.54207438923498 38.0 34.5 40.0 26.0 41.0 62-63 34.23643908562231 37.0 34.0 40.0 25.0 41.0 64-65 33.91374905122224 37.0 34.0 40.0 25.0 41.0 66-67 33.57085804918899 36.0 34.0 39.0 23.5 41.0 68-69 33.20695963423273 36.0 34.0 39.0 23.0 41.0 70-71 32.82781729139093 35.0 33.0 38.5 22.5 40.0 72-73 32.43539623311517 35.0 33.0 37.0 22.0 39.5 74-75 32.03456775822373 35.0 33.0 37.0 20.5 39.0 76-77 29.311268533255973 33.0 29.0 34.5 14.0 36.5 78-79 30.962377057244844 34.5 31.5 36.0 18.0 37.0 80-81 31.167693703049572 35.0 32.0 35.5 19.0 37.0 82-83 31.019658068208805 35.0 32.0 35.0 18.0 37.0 84-85 30.80305207357735 35.0 32.0 35.0 17.5 36.0 86-87 30.57035283530584 35.0 32.0 35.0 12.5 36.0 88-89 30.307828905619473 35.0 32.0 35.0 7.0 36.0 90-91 30.137610650692718 35.0 32.0 35.0 4.5 35.0 92-93 30.006358992465675 34.0 31.0 35.0 2.0 35.0 94-95 29.922219698611784 34.0 31.0 35.0 2.0 35.0 96-97 29.73997318003496 34.0 31.0 35.0 2.0 35.0 98-99 29.489234707827034 34.0 31.0 35.0 2.0 35.0 100-101 28.414473422967593 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 80507.0 3 26629.0 4 13972.0 5 9785.0 6 8517.0 7 8625.0 8 8877.0 9 9517.0 10 10312.0 11 11167.0 12 11476.0 13 12598.0 14 13759.0 15 14947.0 16 15345.0 17 16419.0 18 15634.0 19 14242.0 20 13547.0 21 13446.0 22 14349.0 23 16295.0 24 19209.0 25 23105.0 26 28284.0 27 33988.0 28 41071.0 29 49341.0 30 60326.0 31 75777.0 32 96243.0 33 128209.0 34 185456.0 35 279244.0 36 495230.0 37 971338.0 38 988769.0 39 118215.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.97818278352908 19.274221902937096 13.799120907625387 25.94847440590844 2 15.03085041941142 20.40384394076011 37.70855806695154 26.85674757287692 3 17.914149720224994 24.280985062984158 28.906138153864365 28.89872706292649 4 13.270744184940664 16.658631823946394 34.95556217678307 35.11506181432988 5 14.569262825118551 37.12147507837657 33.89247686145613 14.416785235048746 6 34.07970045493761 35.01380595382233 16.67886190479924 14.227631686440825 7 29.466242935531067 31.55817303253987 20.431512747975663 18.544071283953397 8 27.197734171333813 34.939804441260925 19.199018032995447 18.663443354409807 9 26.80428380905217 15.641522991594606 18.88255541355329 38.67163778579993 10-11 26.069492534532134 25.211662847943415 27.235377290237018 21.483467327287435 12-13 26.455804831757533 22.362458703845807 27.305161317409915 23.876575146986738 14-15 23.63966675624832 23.96666297801034 24.341615947642158 28.052054318099184 16-17 24.105908725434478 27.13584501650706 25.05566216285599 23.702584095202468 18-19 24.188471346560835 26.586013431526844 26.213557609438613 23.011957612473704 20-21 24.61189600076181 25.619195291142656 26.21918408656309 23.549724621532445 22-23 24.52084254923727 25.293612692515964 25.967047089064266 24.218497669182497 24-25 24.31043932627381 25.56327431960792 25.85894575554675 24.267340598571522 26-27 24.09717526327817 25.834249045915804 25.917033088703494 24.151542602102534 28-29 24.247838287966815 26.037065942350385 25.71401217876266 24.001083590920143 30-31 24.61597459186135 25.71477464644974 25.5485304833033 24.120720278385615 32-33 24.323951380782784 25.74661784390181 25.531564787658027 24.397865987657376 34-35 24.545536524975052 25.85624648475438 25.621671227606296 23.976545762664276 36-37 24.58424507520282 25.693245246306567 25.739581103114606 23.982928575376008 38-39 24.49323929131338 25.765874522875603 25.621075812684342 24.119810373126676 40-41 24.586744537068007 25.59963729052991 25.64307895823466 24.170539214167423 42-43 24.41080675275972 25.612103700692728 25.522371618305144 24.454717928242413 44-45 24.333211836598103 25.65679693291989 25.62324410447842 24.38674712600358 46-47 24.507836397480556 25.590319347014518 25.49770312269582 24.40414113280911 48-49 24.29837157906266 25.681822378500808 25.57978205258896 24.44002398984757 50-51 24.377636863990933 25.679375044263903 25.660543914851424 24.282444176893737 52-53 24.58134506039717 25.554786796733747 25.561400848596765 24.30246729427232 54-55 24.118355919357782 25.494446960349272 25.791368694238653 24.595828426054297 56-57 24.237762136940834 25.63803902806586 25.573147808438492 24.551051026554813 58-59 24.31249532839945 25.57618936262484 25.677039021634364 24.434276287341344 60-61 24.37577495369881 25.581793880907416 25.78484376478135 24.257587400612426 62-63 24.311217891354406 25.60681442899307 25.73085686929124 24.35111081036128 64-65 24.135913956295283 25.442304045597975 25.719106585992783 24.702675412113962 66-67 24.148473803339463 25.62123422530358 25.60324503703344 24.627046934323523 68-69 24.099986389112505 25.547699076938958 25.65973590830411 24.69257862564443 70-71 24.095463820070968 25.411941795525255 25.629760716736467 24.862833667667307 72-73 24.086779925153518 25.645147722823875 25.461491123601686 24.806581228420917 74-75 24.021397395655125 25.73836257302544 25.47811782355244 24.762122207766993 76-77 24.093788169106215 25.363067232137254 25.593709255915158 24.94943534284137 78-79 23.93711206298715 25.427597577136886 25.66985098561691 24.965439374259056 80-81 24.0948918870701 25.58331888790899 25.47895755069711 24.842831674323797 82-83 24.060779385704727 25.568361630514662 25.55180452240522 24.81905446137539 84-85 24.023638398038692 25.601311079724248 25.461183425290656 24.9138670969464 86-87 23.8507631793643 25.79257428085922 25.426849626871245 24.929812912905234 88-89 23.698892429720175 25.623532105793494 25.52512621528612 25.152449249200203 90-91 23.7184240603671 25.505286713648683 25.603062656656228 25.173226569327987 92-93 23.796698036037093 25.421539226938627 25.620631840368592 25.16113089665569 94-95 23.72881398802579 25.387461975932457 25.620630306976093 25.263093729065663 96-97 23.5542699028387 25.29827366468823 25.67987171465795 25.46758471781512 98-99 23.34909907631294 25.355020082352826 25.611841506227044 25.68403933510719 100-101 23.366227749856748 25.414126805693034 25.583777567932703 25.635867876517516 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 52.5 2 58.0 3 84.0 4 68.0 5 72.0 6 139.0 7 287.0 8 464.5 9 515.5 10 422.0 11 355.0 12 356.0 13 361.0 14 396.0 15 479.5 16 550.5 17 579.5 18 623.5 19 701.0 20 816.5 21 963.5 22 1141.0 23 1329.0 24 1656.0 25 2148.0 26 2845.0 27 4076.0 28 6020.0 29 8853.0 30 13131.0 31 19124.5 32 27061.5 33 34007.0 34 40078.5 35 47942.0 36 58494.0 37 69766.0 38 80462.5 39 90603.0 40 100140.5 41 109313.0 42 118133.5 43 128467.5 44 139242.0 45 149788.5 46 158228.5 47 166361.0 48 174705.5 49 178885.5 50 179545.0 51 179958.5 52 179705.0 53 179006.5 54 176535.0 55 168786.5 56 157656.0 57 143410.0 58 128184.0 59 111332.5 60 92339.0 61 76317.0 62 62401.0 63 47510.0 64 34182.0 65 25002.5 66 18692.0 67 14283.5 68 10831.5 69 8077.0 70 5892.5 71 4200.0 72 2943.5 73 2114.0 74 1587.0 75 1113.5 76 754.5 77 449.0 78 231.0 79 114.5 80 75.5 81 53.5 82 30.5 83 20.5 84 16.5 85 12.5 86 6.0 87 3.0 88 3.0 89 2.5 90 2.0 91 2.0 92 2.5 93 1.0 94 1.0 95 0.5 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1533472727682003 2 4.046769527117276E-4 3 0.0059942773620424656 4 0.003970892598483827 5 0.026784555807607472 6 0.001062277000868285 7 1.5175385726689787E-4 8 0.00187163090629174 9 0.0 10-11 0.10502631538346556 12-13 3.288000240782787E-4 14-15 0.0052734465400247005 16-17 2.023384763558638E-4 18-19 3.414461788505202E-4 20-21 7.714154411067307E-4 22-23 2.023384763558638E-4 24-25 0.0014669539535800125 26-27 0.002794800204665369 28-29 0.006310431231348502 30-31 0.013898124094693395 32-33 0.014176339499682706 34-35 0.011520646997511996 36-37 7.461231315622478E-4 38-39 1.6440001203913934E-4 40-41 0.004894061896857456 42-43 0.008485569852174038 44-45 0.007688862101522824 46-47 0.009105231436013873 48-49 0.010926277723216646 50-51 0.0053366773138859075 52-53 0.001707230894252601 54-55 8.978769888291456E-4 56-57 0.005855169659547809 58-59 0.009143169900330596 60-61 0.00781532364924524 62-63 0.01741375512137653 64-65 0.03324674089622287 66-67 0.03533335643364272 68-69 0.026632801950340575 70-71 0.04135292610522966 72-73 0.0256337557233335 74-75 0.024116217150664518 76-77 0.24188300232866294 78-79 0.0693768050805168 80-81 0.053518526996125984 82-83 0.01987975530196362 84-85 0.03296852549123356 86-87 0.08240234449592554 88-89 0.26328029620329557 90-91 0.31912571567751397 92-93 0.05292415772183063 94-95 0.004792892658679524 96-97 0.0100284007343875 98-99 0.0012899077867686319 100-101 0.00153018472744122 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3953771.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.34615193942424 #Duplication Level Percentage of deduplicated Percentage of total 1 73.90327798812845 39.42455496376208 2 13.430211676250634 14.329002253197917 3 4.929163288195985 7.888556811190051 4 2.399321663847936 5.119783121247367 5 1.3399257713830288 3.573994189387464 6 0.8590381850406411 2.7495828924567167 7 0.5966930857886993 2.22818960109815 8 0.43121771497861083 1.840304459377625 9 0.3192588362938105 1.532810735004005 >10 1.6890652021800876 15.93696255489909 >50 0.07861247809820007 2.815808033721334 >100 0.022788205953993463 1.900345450439717 >500 0.0010931929776703611 0.4246284682736893 >1k 3.3271088241023684E-4 0.23547646594484256 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 2.5292309544482976E-5 5 0.0 2.5292309544482976E-5 0.0 0.0 2.5292309544482976E-5 6 0.0 2.5292309544482976E-5 0.0 0.0 7.587692863344892E-5 7 0.0 2.5292309544482976E-5 0.0 0.0 7.587692863344892E-5 8 0.0 2.5292309544482976E-5 0.0 0.0 7.587692863344892E-5 9 0.0 2.5292309544482976E-5 0.0 0.0 7.587692863344892E-5 10-11 0.0 2.5292309544482976E-5 0.0 0.0 7.587692863344892E-5 12-13 0.0 3.793846431672446E-5 0.0 0.0 2.529230954448298E-4 14-15 0.0 6.323077386120743E-5 0.0 0.0 3.4144617885052014E-4 16-17 0.0 7.587692863344892E-5 0.0 2.5292309544482976E-5 3.7938464316724464E-4 18-19 0.0 7.587692863344892E-5 0.0 5.058461908896595E-5 4.046769527117276E-4 20-21 0.0 1.011692381779319E-4 0.0 8.852308340569041E-5 4.299692622562106E-4 22-23 0.0 1.264615477224149E-4 0.0 1.6440001203913936E-4 4.805538813451766E-4 24-25 0.0 1.264615477224149E-4 0.0 3.667384883950032E-4 5.058461908896596E-4 26-27 0.0 1.264615477224149E-4 0.0 7.081846672455233E-4 5.058461908896596E-4 28-29 0.0 1.264615477224149E-4 0.0 0.0020360309183308795 5.058461908896596E-4 30-31 0.0 1.264615477224149E-4 0.0 0.007423292851305753 5.058461908896596E-4 32-33 0.0 1.264615477224149E-4 0.0 0.020891447683742938 5.564308099786255E-4 34-35 0.0 1.264615477224149E-4 0.0 0.03878575668646464 5.564308099786255E-4 36-37 0.0 1.5175385726689785E-4 0.0 0.06904800505643852 5.564308099786255E-4 38-39 0.0 1.8969232158362232E-4 0.0 0.11700222395277826 5.817231195231085E-4 40-41 0.0 2.023384763558638E-4 0.0 0.1728602895817689 6.070154290675914E-4 42-43 0.0 2.023384763558638E-4 0.0 0.2324489708685708 6.070154290675914E-4 44-45 0.0 2.023384763558638E-4 0.0 0.3070106994057066 6.070154290675914E-4 46-47 0.0 2.023384763558638E-4 0.0 0.39792390606335065 6.449538933843159E-4 48-49 0.0 2.276307859003468E-4 0.0 0.49237803605722236 7.208308220177648E-4 50-51 0.0 2.276307859003468E-4 0.0 0.592851735722681 7.334769767900064E-4 52-53 0.0 2.402769406725883E-4 0.0 0.6990162050356483 7.714154411067307E-4 54-55 0.0 3.035077145337957E-4 0.0 0.8243775372928781 7.840615958789722E-4 56-57 0.0 3.5409233362276166E-4 0.0 0.9660144707419829 7.967077506512137E-4 58-59 0.0 3.5409233362276166E-4 0.0 1.1202722666537843 8.346462149679382E-4 60-61 0.0 3.5409233362276166E-4 0.0 1.285519571062664 8.346462149679382E-4 62-63 0.0 3.5409233362276166E-4 0.0 1.4569761374647139 8.599385245124212E-4 64-65 0.0 3.5409233362276166E-4 0.0 1.644973874308856 8.599385245124212E-4 66-67 0.0 4.046769527117276E-4 0.0 1.867482967526445 8.599385245124212E-4 68-69 0.0 4.299692622562106E-4 0.0 2.1138680009540263 8.599385245124212E-4 70-71 0.0 4.4261541702845207E-4 0.0 2.373974112309489 8.978769888291457E-4 72-73 0.0 4.552615718006936E-4 0.0 2.650684624880905 0.0010116923817793191 74-75 0.0 4.552615718006936E-4 0.0 2.9447077233355197 0.0010116923817793191 76-77 0.0 4.552615718006936E-4 0.0 3.2784271016202 0.0010243385365515606 78-79 0.0 4.805538813451765E-4 0.0 3.652690052104687 0.001036984691323802 80-81 0.0 4.805538813451765E-4 0.0 4.0466810040338705 0.0010749231556405265 82-83 0.0 5.311385004341425E-4 0.0 4.45543001858226 0.001163446239046217 84-85 0.0 6.070154290675914E-4 0.0 4.890634788914179 0.001163446239046217 86-87 2.5292309544482976E-5 6.070154290675914E-4 0.0 5.358555161641886 0.0012013847033629415 88-89 2.5292309544482976E-5 6.070154290675914E-4 0.0 5.870420922203133 0.0012393231676796658 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3070 0.0 49.232193 1 GTATCAA 5335 0.0 41.60475 1 TCAACGC 6960 0.0 31.163494 4 CAACGCA 7160 0.0 30.083805 5 ATCAACG 7245 0.0 29.9376 3 TATCAAC 7255 0.0 29.896338 2 AACGCAG 7685 0.0 28.148457 6 GTACATG 11390 0.0 26.247465 1 TACATGG 11925 0.0 24.31767 2 ACATGGG 12310 0.0 23.248688 3 ACGCAGA 9635 0.0 22.056538 7 CATGGGG 10830 0.0 21.2984 4 CGCAGAG 9890 0.0 21.199411 8 AGAGTAC 9340 0.0 17.713888 10-11 TATATCG 245 3.7290429E-6 17.46723 5 GCAGAGT 11405 0.0 17.466272 9 ATGGGGG 6965 0.0 17.203903 5 TAAGTAC 2615 0.0 15.994528 1 GTATAGC 940 0.0 15.674522 1 CTTACAC 1910 0.0 15.654758 3 >>END_MODULE