##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921402_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2215162 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.361772637847707 33.0 31.0 34.0 28.0 34.0 2 31.493394162593976 34.0 31.0 34.0 28.0 34.0 3 31.568015341541614 34.0 31.0 34.0 28.0 34.0 4 35.057607073433005 37.0 35.0 37.0 32.0 37.0 5 34.79581944796814 37.0 35.0 37.0 32.0 37.0 6 34.75633745974335 37.0 35.0 37.0 32.0 37.0 7 34.62252512457328 37.0 35.0 37.0 32.0 37.0 8 34.583260727657844 37.0 35.0 37.0 32.0 37.0 9 36.19314208170779 39.0 37.0 39.0 32.0 39.0 10-11 36.04226914329516 39.0 37.0 39.0 31.5 39.0 12-13 35.97366919439752 39.0 37.0 39.0 31.0 39.0 14-15 37.205291757442566 40.0 38.0 41.0 31.0 41.0 16-17 37.189495170104934 40.0 38.0 41.0 31.0 41.0 18-19 37.16034876907423 40.0 38.0 41.0 31.0 41.0 20-21 37.124608719362286 40.0 38.0 41.0 31.0 41.0 22-23 37.017658979343274 40.0 38.0 41.0 31.0 41.0 24-25 36.952179343993805 40.0 37.0 41.0 30.5 41.0 26-27 36.81407522339224 40.0 37.0 41.0 30.0 41.0 28-29 36.661507826515624 40.0 37.0 41.0 30.0 41.0 30-31 36.525599933548875 40.0 37.0 41.0 30.0 41.0 32-33 36.4680716353928 40.0 36.5 41.0 30.0 41.0 34-35 36.58931694386234 40.0 37.0 41.0 30.0 41.0 36-37 36.562945734894335 40.0 37.0 41.0 30.0 41.0 38-39 36.476733078664225 40.0 37.0 41.0 30.0 41.0 40-41 36.352928815138576 40.0 37.0 41.0 29.5 41.0 42-43 36.24330951867177 40.0 36.0 41.0 29.0 41.0 44-45 36.10232569897822 40.0 36.0 41.0 28.0 41.0 46-47 35.94066145049437 40.0 36.0 41.0 28.0 41.0 48-49 35.78313865983617 40.0 35.5 41.0 27.0 41.0 50-51 35.63155877538527 40.0 35.0 41.0 27.0 41.0 52-53 35.46402859023404 39.0 35.0 41.0 26.5 41.0 54-55 35.260293829525786 39.0 35.0 41.0 26.0 41.0 56-57 35.00318238575779 39.0 35.0 41.0 26.0 41.0 58-59 34.7799364109713 38.5 35.0 40.5 25.5 41.0 60-61 34.5102197943085 38.0 34.5 40.0 24.5 41.0 62-63 34.21765812161819 37.5 34.0 40.0 24.0 41.0 64-65 33.91109747278077 37.0 34.0 40.0 23.0 41.0 66-67 33.575435114903556 36.5 34.0 39.5 22.5 41.0 68-69 33.21357241592263 36.0 34.0 39.0 22.0 41.0 70-71 32.831287959977644 35.5 33.0 39.0 21.5 40.0 72-73 32.43430480479532 35.0 33.0 37.5 20.0 40.0 74-75 32.02303533556462 35.0 33.0 37.0 18.5 39.0 76-77 29.27142552102284 33.0 29.0 34.5 11.0 36.5 78-79 30.91957766520011 34.5 31.5 36.0 14.5 38.0 80-81 31.110437295330996 35.0 32.0 36.0 16.5 37.0 82-83 30.938251694458465 35.0 32.0 35.0 13.5 37.0 84-85 30.702727385175443 35.0 32.0 35.0 9.5 36.5 86-87 30.456565027749665 35.0 32.0 35.0 7.0 36.0 88-89 30.174553147805895 35.0 32.0 35.0 2.0 36.0 90-91 29.986616103020907 34.5 31.0 35.0 2.0 35.5 92-93 29.84130032024746 34.0 31.0 35.0 2.0 35.0 94-95 29.740767943834356 34.0 31.0 35.0 2.0 35.0 96-97 29.55476619768667 34.0 31.0 35.0 2.0 35.0 98-99 29.29237658464708 34.0 31.0 35.0 2.0 35.0 100-101 28.208962820777895 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 43153.0 3 14573.0 4 7853.0 5 5493.0 6 4771.0 7 4700.0 8 4863.0 9 5258.0 10 5824.0 11 6564.0 12 6921.0 13 7593.0 14 8238.0 15 9385.0 16 10450.0 17 11387.0 18 10436.0 19 8837.0 20 8453.0 21 8141.0 22 8682.0 23 9627.0 24 11108.0 25 13374.0 26 16114.0 27 19385.0 28 23037.0 29 28353.0 30 34045.0 31 42666.0 32 54028.0 33 71406.0 34 103568.0 35 152328.0 36 262997.0 37 520487.0 38 571939.0 39 79124.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.26145179666166 20.349657305097928 14.22952420565311 25.159366692587305 2 14.850112068907142 21.10082590157348 38.394198148662284 25.6548638808571 3 17.697128611582887 25.274014842263703 29.450399227819446 27.57845731833396 4 12.898020950288775 17.150334551814336 35.93575413319681 34.01589036470008 5 13.875295825056705 37.958672771089994 34.32383457006758 13.842196833785717 6 33.03061219883258 36.23408106973406 16.940269871294237 13.795036860139135 7 28.5009532038529 32.41123331441823 20.993507921094675 18.094305560634194 8 26.690081394771415 35.65966782987906 19.51289540568725 18.137355369662277 9 26.706489186795366 15.921408908242377 19.30481833834275 38.06728356661951 10-11 25.547604737653135 25.83238812242703 27.74303970789594 20.876967432023896 12-13 26.022128454100546 23.0940515728682 27.838749127037044 23.04507084599421 14-15 23.15787644091284 24.71030504790985 25.084654017265105 27.047164493912202 16-17 23.330862476502784 27.942998145503072 25.780509363674614 22.945630014319534 18-19 23.29882633468681 27.24053784961726 27.21430943078688 22.246326384909043 20-21 23.707656796874964 26.277242597881944 27.357421168746214 22.657679436496878 22-23 23.605274117077453 25.945581747573254 27.125317274279592 23.323826861069698 24-25 23.464352334225985 26.28536822317848 26.972553229525754 23.277726213069787 26-27 23.23768313204468 26.52872722594101 26.977826082540197 23.25576355947411 28-29 23.338186562649547 26.79228629989797 26.770886944587406 23.098640192865076 30-31 23.756309401609453 26.358382364129028 26.695967378370405 23.18934085589111 32-33 23.502704152387007 26.388179342519724 26.604380598189163 23.504735906904106 34-35 23.704781757345827 26.532136708840188 26.717450066526794 23.04563146728719 36-37 23.710937403011496 26.418974997816168 26.818880827972325 23.051206771200007 38-39 23.615768734971425 26.530868826138843 26.612939813931796 23.240422624957933 40-41 23.796558351237426 26.32890196714014 26.646819045950803 23.227720635671634 42-43 23.57504631541071 26.345889604647997 26.448418955424113 23.630645124517176 44-45 23.492509302000627 26.377591134549494 26.652830577966714 23.477068985483168 46-47 23.618841058339417 26.411893124053453 26.367987149206503 23.60127866840063 48-49 23.445495499156177 26.574008608896584 26.407027257893972 23.573468634053267 50-51 23.564188769758697 26.58251306863046 26.45341815960636 23.39988000200448 52-53 23.903222660923127 26.355024499735002 26.28193610656911 23.45981673277276 54-55 23.199237067676385 26.295884566985116 26.719018571081932 23.785859794256563 56-57 23.388106377417078 26.431353410512504 26.451082360918797 23.729457851151615 58-59 23.526483798607504 26.41246512052086 26.460344337577148 23.600706743294484 60-61 23.613172505098774 26.43661321652331 26.640157923785296 23.310056354592625 62-63 23.60450492001796 26.32475437159969 26.612322631811715 23.458418076570638 64-65 23.22209294265263 26.19257016038369 26.671004920727135 23.914331976236543 66-67 23.303912406036346 26.367786353895166 26.500985502088987 23.827315737979504 68-69 23.352111938306955 26.278697918383507 26.52427529049566 23.84491485281388 70-71 23.317803606461425 26.125799820074352 26.51387739765374 24.04251917581048 72-73 23.319061354757256 26.45376402738919 26.261652238150884 23.965522379702662 74-75 23.21198726732145 26.44022113986778 26.31988427793254 24.02790731487822 76-77 23.18783753239146 26.0612055719755 26.503446679582897 24.247510216050145 78-79 23.188169455256567 26.14397611954862 26.489123268419952 24.178731156774866 80-81 23.464274833743872 26.284175749674173 26.183836021894525 24.067713394687438 82-83 23.30801589077205 26.303304963619954 26.390786837939995 23.997892307667996 84-85 23.28821096073331 26.336358827063673 26.233895901008804 24.14153431119422 86-87 23.105783104278586 26.475809925788475 26.205674648059457 24.21273232187348 88-89 23.01306630105587 26.212379558687005 26.322913757524542 24.451640382732585 90-91 23.092110343197206 26.090401388177796 26.378163417946272 24.439324850678727 92-93 23.22752350346765 25.977186449175377 26.420517290828737 24.37477275652824 94-95 23.06779841217637 25.952593728929603 26.40922112399999 24.57038673489404 96-97 22.905709316198124 25.783110771998697 26.547377854629882 24.7638020571733 98-99 22.708715504696432 25.754213562718537 26.41740008581856 25.119670846766468 100-101 22.728629103432894 25.825675006444328 26.437174933987983 25.008520956134795 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 57.0 1 49.5 2 61.5 3 83.0 4 78.5 5 81.0 6 130.5 7 309.0 8 493.0 9 525.5 10 446.5 11 379.0 12 379.0 13 385.5 14 422.5 15 477.5 16 543.0 17 625.5 18 718.5 19 814.0 20 909.0 21 1086.5 22 1325.0 23 1614.0 24 1975.5 25 2566.5 26 3472.5 27 4789.5 28 6740.0 29 9219.5 30 12661.0 31 17419.5 32 23677.5 33 28706.5 34 32695.0 35 38014.5 36 44698.5 37 51253.0 38 56690.0 39 61875.5 40 66087.5 41 69507.5 42 73773.0 43 78051.5 44 81978.5 45 86811.5 46 90029.5 47 92231.5 48 94525.0 49 95405.5 50 94751.5 51 93374.0 52 91885.0 53 89871.5 54 87780.0 55 83598.5 56 76756.0 57 68784.5 58 61045.5 59 52147.0 60 42085.5 61 34293.5 62 27843.5 63 20895.5 64 14670.0 65 10452.5 66 7635.0 67 5735.0 68 4208.5 69 3101.0 70 2312.5 71 1648.0 72 1120.5 73 790.5 74 558.5 75 374.5 76 256.0 77 154.5 78 83.0 79 45.5 80 27.5 81 17.5 82 11.5 83 5.0 84 3.5 85 2.5 86 2.5 87 4.0 88 2.5 89 2.0 90 2.5 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14816072142804906 2 3.1600397623288953E-4 3 0.0061395058239532814 4 0.004920633344197851 5 0.026770051129443355 6 0.0014445896056360663 7 4.514342517612707E-5 8 0.0014445896056360663 9 0.0 10-11 0.10166299349663817 12-13 2.2571712588063538E-4 14-15 0.005259209033018804 16-17 2.7086055105676244E-4 18-19 3.3857568882095305E-4 20-21 8.577250783464145E-4 22-23 2.0314541329257186E-4 24-25 0.001715450156692829 26-27 0.002686033797979561 28-29 0.0064103663750100445 30-31 0.01410732036753971 32-33 0.014784471745181616 34-35 0.011963007671673674 36-37 6.997230902299696E-4 38-39 2.93432263644826E-4 40-41 0.005372067595959122 42-43 0.0084192487953477 44-45 0.008193531669467064 46-47 0.009096400172989606 48-49 0.011014995742975006 50-51 0.005642928147015884 52-53 0.0016251633063405749 54-55 0.0011060139168151133 56-57 0.006455509800186172 58-59 0.00963812127510313 60-61 0.007651810567353539 62-63 0.017312503555044732 64-65 0.03401557087021175 66-67 0.03649845925489874 68-69 0.02640890372803434 70-71 0.04126109061098014 72-73 0.025551178649687922 74-75 0.024625738433577318 76-77 0.23842500006771516 78-79 0.06629311987114261 80-81 0.05342724369594638 82-83 0.018847380011033053 84-85 0.03171325618622926 86-87 0.0824544660841961 88-89 0.2659399177125646 90-91 0.31995402593580063 92-93 0.050876640173495205 94-95 0.005304352458194931 96-97 0.010360416077921163 98-99 0.0010608704916389862 100-101 0.0015800198811644476 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2215162.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.05858029406023 #Duplication Level Percentage of deduplicated Percentage of total 1 79.36658835656449 49.253777961914835 2 11.595412754036042 14.391897068782313 3 3.7672902341370906 7.0137805045867685 4 1.6614497519576943 4.124288513456522 5 0.9547038225715782 2.9623781915052256 6 0.567989025419291 2.1149155524076853 7 0.4071011462048394 1.7684883418689883 8 0.30453530125573647 1.5119222756283957 9 0.2226845451504972 1.243753805292157 >10 1.0957280723007035 11.629044966224573 >50 0.04199351721181154 1.7728801601529367 >100 0.012774278282319071 1.3526389086967623 >500 0.001311896180965563 0.5248063618093342 >1k 4.372987269881519E-4 0.335427387673477 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.514342517612707E-5 0.0 3 0.0 0.0 0.0 4.514342517612707E-5 0.0 4 0.0 0.0 0.0 4.514342517612707E-5 0.0 5 0.0 0.0 0.0 4.514342517612707E-5 0.0 6 0.0 0.0 0.0 4.514342517612707E-5 4.514342517612707E-5 7 0.0 0.0 0.0 4.514342517612707E-5 4.514342517612707E-5 8 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 4.514342517612707E-5 9 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 4.514342517612707E-5 10-11 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 4.514342517612707E-5 12-13 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 4.514342517612707E-5 14-15 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 9.028685035225414E-5 16-17 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 1.3543027552838122E-4 18-19 4.514342517612707E-5 0.0 0.0 4.514342517612707E-5 1.8057370070450829E-4 20-21 4.514342517612707E-5 0.0 0.0 6.771513776419061E-5 1.8057370070450829E-4 22-23 4.514342517612707E-5 0.0 0.0 9.028685035225414E-5 2.2571712588063535E-4 24-25 4.514342517612707E-5 0.0 0.0 2.2571712588063538E-4 2.7086055105676244E-4 26-27 4.514342517612707E-5 0.0 0.0 6.545796650538426E-4 2.7086055105676244E-4 28-29 4.514342517612707E-5 0.0 0.0 0.0023926015343347347 2.7086055105676244E-4 30-31 4.514342517612707E-5 0.0 0.0 0.008328961944995446 2.7086055105676244E-4 32-33 4.514342517612707E-5 0.0 0.0 0.023068290265000936 2.7086055105676244E-4 34-35 4.514342517612707E-5 0.0 2.2571712588063536E-5 0.041983385413798174 4.965776769373978E-4 36-37 4.514342517612707E-5 0.0 4.514342517612707E-5 0.07721782876376536 4.965776769373978E-4 38-39 4.514342517612707E-5 0.0 4.514342517612707E-5 0.12967448881842503 4.965776769373978E-4 40-41 4.514342517612707E-5 0.0 4.514342517612707E-5 0.1892186666257366 4.965776769373978E-4 42-43 4.514342517612707E-5 0.0 4.514342517612707E-5 0.25029772088903657 4.965776769373978E-4 44-45 4.514342517612707E-5 0.0 4.514342517612707E-5 0.32674811142480775 4.965776769373978E-4 46-47 4.514342517612707E-5 0.0 4.514342517612707E-5 0.41732839404070676 4.965776769373978E-4 48-49 4.514342517612707E-5 0.0 4.514342517612707E-5 0.5117007243714005 4.965776769373978E-4 50-51 4.514342517612707E-5 0.0 4.514342517612707E-5 0.6146277337729701 4.965776769373978E-4 52-53 4.514342517612707E-5 0.0 4.514342517612707E-5 0.7201730618347553 5.417211021135249E-4 54-55 4.514342517612707E-5 0.0 4.514342517612707E-5 0.8452203495726271 5.868645272896519E-4 56-57 4.514342517612707E-5 0.0 4.514342517612707E-5 0.9871061349011945 5.868645272896519E-4 58-59 4.514342517612707E-5 0.0 4.514342517612707E-5 1.1374337407376978 6.320079524657791E-4 60-61 4.514342517612707E-5 0.0 4.514342517612707E-5 1.3028843940082036 6.771513776419061E-4 62-63 4.514342517612707E-5 0.0 4.514342517612707E-5 1.4770703000502898 8.125816531702873E-4 64-65 4.514342517612707E-5 0.0 4.514342517612707E-5 1.6603074628401897 8.125816531702873E-4 66-67 4.514342517612707E-5 0.0 4.514342517612707E-5 1.876070463469489 8.125816531702873E-4 68-69 4.514342517612707E-5 0.0 4.514342517612707E-5 2.1090105373783046 8.125816531702873E-4 70-71 4.514342517612707E-5 0.0 4.514342517612707E-5 2.3637323139346016 8.125816531702873E-4 72-73 4.514342517612707E-5 0.0 4.514342517612707E-5 2.6304848133003365 9.028685035225415E-4 74-75 4.514342517612707E-5 0.0 4.514342517612707E-5 2.913511517442065 9.028685035225415E-4 76-77 4.514342517612707E-5 0.0 4.514342517612707E-5 3.231795236646349 9.028685035225415E-4 78-79 4.514342517612707E-5 0.0 4.514342517612707E-5 3.59032431939515 9.028685035225415E-4 80-81 4.514342517612707E-5 0.0 4.514342517612707E-5 3.9679716427060416 9.480119286986687E-4 82-83 4.514342517612707E-5 0.0 4.514342517612707E-5 4.358304268491424 9.931553538747957E-4 84-85 4.514342517612707E-5 0.0 4.514342517612707E-5 4.774752365741197 9.931553538747957E-4 86-87 4.514342517612707E-5 0.0 4.514342517612707E-5 5.222665430338729 9.931553538747957E-4 88-89 4.514342517612707E-5 0.0 4.514342517612707E-5 5.7068963804904556 9.931553538747957E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2155 0.0 56.670612 1 GTATCAA 3995 0.0 42.940044 1 TCAACGC 5235 0.0 32.185753 4 ATCAACG 5390 0.0 31.4363 3 TATCAAC 5420 0.0 31.087162 2 CAACGCA 5420 0.0 30.964462 5 AACGCAG 5760 0.0 29.132746 6 GTACATG 6620 0.0 25.697868 1 TACATGG 6695 0.0 24.81244 2 ACGCAGA 6805 0.0 24.309189 7 CGCAGAG 7010 0.0 23.191427 8 ACATGGG 7175 0.0 22.491013 3 GTATCGC 110 0.0028653222 21.6076 6 CATGGGG 5830 0.0 20.352766 4 GCAGAGT 7850 0.0 19.135365 9 AGAGTAC 6660 0.0 19.021395 10-11 ATGGGGG 3770 0.0 18.159723 5 CAGAGTA 7170 0.0 17.27062 10-11 GTGGTAT 1160 0.0 16.795692 1 GTATTAG 485 1.8189894E-12 16.656328 1 >>END_MODULE