##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921401_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1538153 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.99386276917836 31.0 31.0 34.0 26.0 34.0 2 30.172250744886888 31.0 31.0 34.0 26.0 34.0 3 30.21766040179358 33.0 31.0 34.0 26.0 34.0 4 33.703461229149504 37.0 35.0 37.0 30.0 37.0 5 33.335879460625826 37.0 35.0 37.0 27.0 37.0 6 33.266574261468136 37.0 35.0 37.0 27.0 37.0 7 33.07698909016203 37.0 35.0 37.0 26.0 37.0 8 33.0091128775876 37.0 35.0 37.0 26.0 37.0 9 34.48285313619646 39.0 35.0 39.0 26.0 39.0 10-11 34.28523820452192 39.0 35.0 39.0 25.0 39.0 12-13 34.18395374192295 39.0 35.0 39.0 25.0 39.0 14-15 35.24082097164586 40.0 36.0 41.0 24.0 41.0 16-17 35.18582481716709 40.0 36.0 41.0 24.0 41.0 18-19 35.13049026982361 40.0 36.0 41.0 22.5 41.0 20-21 35.07566509963573 40.0 36.0 41.0 22.0 41.0 22-23 34.940439605162815 40.0 35.5 41.0 19.5 41.0 24-25 34.84895650822773 39.5 35.0 41.0 19.0 41.0 26-27 34.67260084009848 39.0 35.0 41.0 18.0 41.0 28-29 34.4955947165204 39.0 35.0 41.0 17.0 41.0 30-31 34.314371847273975 39.0 34.0 41.0 16.0 41.0 32-33 34.24783847900696 39.0 34.5 41.0 16.0 41.0 34-35 34.36752650744107 39.0 35.0 41.0 16.0 41.0 36-37 34.31385044270628 39.0 35.0 41.0 15.0 41.0 38-39 34.215381044668504 39.0 35.0 41.0 11.0 41.0 40-41 34.0662671398749 39.0 34.0 41.0 9.0 41.0 42-43 33.9266158828153 39.0 34.0 41.0 8.5 41.0 44-45 33.750694501782334 39.0 34.0 41.0 4.5 41.0 46-47 33.55957794835754 39.0 33.5 41.0 2.0 41.0 48-49 33.3764631996947 39.0 33.0 40.5 2.0 41.0 50-51 33.20684808338312 38.5 33.0 40.0 2.0 41.0 52-53 33.01696742781765 38.0 33.0 40.0 2.0 41.0 54-55 32.79469337575651 38.0 33.0 40.0 2.0 41.0 56-57 32.51924418442118 38.0 32.5 40.0 2.0 41.0 58-59 32.277894331708225 37.0 32.0 40.0 2.0 41.0 60-61 31.99929298320778 37.0 32.0 40.0 2.0 41.0 62-63 31.715440856663804 36.0 31.5 39.5 2.0 41.0 64-65 31.400441958634804 36.0 31.0 39.0 2.0 41.0 66-67 31.076948782078247 35.0 31.0 39.0 2.0 40.5 68-69 30.724233219972266 35.0 31.0 38.5 2.0 40.0 70-71 30.35673564333327 35.0 30.5 37.5 2.0 40.0 72-73 29.983583232617303 35.0 30.0 37.0 2.0 39.0 74-75 29.58908574114539 35.0 30.0 36.5 2.0 39.0 76-77 27.02840712204833 32.0 26.0 34.5 2.0 36.0 78-79 28.589205365135978 34.0 29.0 35.0 2.0 37.0 80-81 28.800581931706404 34.0 29.0 35.0 2.0 37.0 82-83 28.658290495158806 34.0 29.0 35.0 2.0 36.5 84-85 28.432800898220137 34.0 29.0 35.0 2.0 36.0 86-87 28.186744751659944 34.0 29.0 35.0 2.0 36.0 88-89 27.903507323393708 34.0 29.0 35.0 2.0 35.0 90-91 27.70006364776456 34.0 29.0 35.0 2.0 35.0 92-93 27.547955242423868 34.0 28.5 35.0 2.0 35.0 94-95 27.42544272253801 34.0 28.0 35.0 2.0 35.0 96-97 27.20656950251373 34.0 27.0 35.0 2.0 35.0 98-99 26.896321432263242 34.0 27.0 35.0 2.0 35.0 100-101 25.790854355841063 32.5 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 75875.0 3 19179.0 4 9620.0 5 6396.0 6 5549.0 7 5278.0 8 5250.0 9 5602.0 10 5952.0 11 6223.0 12 6691.0 13 7013.0 14 7465.0 15 8161.0 16 8756.0 17 9420.0 18 8531.0 19 7181.0 20 6858.0 21 6779.0 22 7136.0 23 8136.0 24 9287.0 25 11412.0 26 13388.0 27 16382.0 28 19272.0 29 23071.0 30 28117.0 31 34184.0 32 43557.0 33 57308.0 34 81635.0 35 123352.0 36 211196.0 37 346950.0 38 262196.0 39 19794.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.02047364002577 23.76380473900339 15.67951529665953 26.53620632431131 2 13.830259617241241 24.21624953109224 34.059834255328965 27.893656596337546 3 15.788098087952 26.89207191521427 28.951120513832425 28.368709483001307 4 13.03585163147256 19.797358930465013 32.955310128347584 34.211479309714846 5 14.386002330517291 37.84476569977943 33.64918431894794 14.120047650755337 6 33.68191384026063 36.33069226983447 16.08420023365838 13.903193656246525 7 28.491741057932547 32.41313759182291 20.80946539058909 18.285655959655458 8 27.109915729497015 35.088307841538686 19.24880797741691 18.552968451547386 9 26.510821745301023 15.383255111812675 19.151670867592497 38.95425227529381 10-11 25.838743004511205 26.00282226741667 27.237515467821076 20.92091926025105 12-13 26.212365504014564 23.355166921301564 27.309722718850566 23.122744855833307 14-15 23.694609528750675 24.92807698834213 24.500244782046458 26.877068700860736 16-17 23.68832859171265 27.91726695411117 25.37964388434953 23.01476056982665 18-19 23.788862013177514 27.129529912710105 26.813826085288795 22.26778198882359 20-21 24.359415699349835 26.043195495357562 26.806029204630377 22.791359600662226 22-23 24.18754725641371 25.8801964176469 26.484298355623082 23.447957970316306 24-25 24.066627571625844 26.244919161684432 26.320660385454563 23.36779288123516 26-27 23.781824375962827 26.46401312780397 26.431960793428555 23.322201702804644 28-29 23.912632172317004 26.601818277571134 26.343569028034867 23.141980522076995 30-31 24.230092753642037 26.235105936818286 26.257831066780675 23.276970242759006 32-33 24.064716333673072 26.324683790193713 25.985431835065352 23.625168041067855 34-35 24.321872949884366 26.40698481102038 26.103608333555478 23.167533905539774 36-37 24.260381765916854 26.348876224976703 26.18179146716996 23.208950541936485 38-39 24.236899103044994 26.261801119982884 26.14783293030549 23.353466846666628 40-41 24.272000572140033 26.231352623554617 26.16396363009847 23.332683174206885 42-43 24.256689783818384 26.21870561505245 25.90317323624845 23.621431364880717 44-45 24.22804935256696 26.187659517611916 25.87134692274658 23.712944207074543 46-47 24.37002600780234 26.312028608582576 25.702438231469444 23.615507152145643 48-49 24.066387748221757 26.37265034400989 25.87390671241111 23.68705519535724 50-51 24.2345237058064 26.362168755225735 25.759592266111508 23.64371527285636 52-53 24.503055506885172 26.1790901841821 25.736863303328178 23.580991005604552 54-55 23.999310855968897 26.18025667364479 25.955959795597277 23.86447267478903 56-57 24.238617830280653 26.202826976196537 25.737147322837746 23.821407870685068 58-59 24.21970825676084 26.130040984232757 25.85937014903151 23.7908806099749 60-61 24.13673046446422 26.222211386078264 26.03697834125726 23.60407980820025 62-63 24.17927217859724 26.205940041686215 25.977644459052936 23.63714332066361 64-65 23.98886933630914 25.967852697540668 25.98066375589016 24.062614210260033 66-67 24.023970904550474 26.270511592819783 25.727687012562612 23.977830490067127 68-69 24.07299208842702 26.134852116044204 25.738151742363574 24.054004053165198 70-71 23.989829849307736 25.981457262019582 25.88127106722848 24.147441821444204 72-73 23.957434813157118 26.16053990380598 25.673489811451788 24.20853547158511 74-75 23.961213117493728 26.16683990754562 25.61171045482965 24.260236520131002 76-77 23.87616845259421 25.835879230042668 25.978210598312867 24.30974171905026 78-79 23.762262570232117 25.94071036722991 25.923636108187708 24.37339095435026 80-81 23.94399588671824 25.98652256304804 25.76202869866081 24.307452851572904 82-83 23.826694965400378 26.025178850337934 25.855366940680604 24.29275924358109 84-85 23.744171974035595 26.00059633724074 25.85281265353489 24.402419035188775 86-87 23.64879041479068 26.136272332574208 25.68632725827244 24.528609994362675 88-89 23.498102897682884 25.923350941448835 25.833008081662385 24.745538079205893 90-91 23.450886267137275 25.790906598985103 25.938816065875447 24.819391068002176 92-93 23.486539192575933 25.73823965827119 25.94795048236091 24.82727066679197 94-95 23.32364169726727 25.749725634810833 26.003285880725258 24.92334678719664 96-97 23.0796612996085 25.673553392579134 26.092101357850872 25.15468394996149 98-99 23.04685938154705 25.611767945079283 25.931438821255092 25.409933852118577 100-101 22.96139878216389 25.532526990426085 26.030044118278074 25.476030109131955 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 78.0 1 64.0 2 53.5 3 62.5 4 51.5 5 59.0 6 115.5 7 279.5 8 434.5 9 449.0 10 378.0 11 293.5 12 283.0 13 319.0 14 343.5 15 367.0 16 426.0 17 473.0 18 513.5 19 582.0 20 650.5 21 743.5 22 852.0 23 1010.0 24 1245.0 25 1518.0 26 1956.5 27 2613.5 28 3574.5 29 5005.5 30 6995.0 31 9805.5 32 13767.0 33 17147.0 34 19904.5 35 23570.5 36 28104.0 37 32584.5 38 36626.5 39 40517.5 40 43758.5 41 46624.5 42 49964.0 43 53344.0 44 56585.0 45 60113.0 46 62371.0 47 64195.0 48 66460.0 49 67466.0 50 67045.5 51 65878.0 52 64375.0 53 62831.0 54 61192.5 55 58138.0 56 53782.0 57 48142.0 58 42591.0 59 37801.0 60 31907.5 61 26453.5 62 21765.5 63 16926.0 64 12596.0 65 9382.5 66 7350.5 67 5893.0 68 4647.0 69 3632.5 70 2859.0 71 2183.0 72 1570.0 73 1206.5 74 975.0 75 762.5 76 556.5 77 380.0 78 235.5 79 152.5 80 106.0 81 62.0 82 41.5 83 25.0 84 12.5 85 8.5 86 6.5 87 4.5 88 3.5 89 3.0 90 3.0 91 2.5 92 0.5 93 1.0 94 1.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10031511819695439 2 2.6005215345937627E-4 3 0.00416083445535002 4 0.00416083445535002 5 0.01930887239435869 6 6.501303836484407E-4 7 1.3002607672968813E-4 8 7.151434220132848E-4 9 0.0 10-11 0.07092922485604489 12-13 1.950391150945322E-4 14-15 0.0032506519182422034 16-17 6.501303836484407E-5 18-19 1.6253259591211017E-4 20-21 4.225847493714864E-4 22-23 1.3002607672968813E-4 24-25 0.0013652738056617254 26-27 0.002828067168870717 28-29 0.0067613559899437825 30-31 0.013522711979887565 32-33 0.013685244575799676 34-35 0.00845169498742973 36-37 7.476499411957067E-4 38-39 2.925586726417983E-4 40-41 0.004420886608809397 42-43 0.007639032007869179 44-45 0.007639032007869179 46-47 0.009946994869821143 48-49 0.012254957731773106 50-51 0.00591618649120081 52-53 0.001852871593398056 54-55 8.451694987429728E-4 56-57 0.005103523511640259 58-59 0.007964097199693399 60-61 0.005883679972018389 62-63 0.015245557496555933 64-65 0.027240463074869666 66-67 0.029613438975186472 68-69 0.022266965639959096 70-71 0.03354672779625954 72-73 0.021031717911027058 74-75 0.020381587527378616 76-77 0.19523415420962675 78-79 0.04882479181199789 80-81 0.04515155514438421 82-83 0.01787858555033212 84-85 0.028118139092795057 86-87 0.06998653579975464 88-89 0.22390490412852299 90-91 0.2669760420452322 92-93 0.036374794965130255 94-95 0.003705743186796112 96-97 0.0063387712405722964 98-99 5.526108261011746E-4 100-101 9.751955754726609E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1538153.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.08019778867617 #Duplication Level Percentage of deduplicated Percentage of total 1 84.25790729801514 59.89068716002859 2 9.322519789505732 13.252931010538305 3 2.77652455815379 5.920677442760645 4 1.2368671312216917 3.5166704130220134 5 0.6631804468781869 2.3569498666842095 6 0.44347454881086773 1.8913355186232241 7 0.2882486487671636 1.4342139676682049 8 0.19520864105654798 1.11003750530865 9 0.14455556245333542 0.9247534173572772 >10 0.6438868687207994 7.435803546859364 >50 0.01936796921848535 0.9316498426647131 >100 0.007616271104734883 0.9583753954821722 >500 4.5876149531269594E-4 0.220305443463371 >1k 1.8350459812507838E-4 0.15560946953925495 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.501303836484407E-5 2 0.0 0.0 0.0 0.0 6.501303836484407E-5 3 0.0 0.0 0.0 0.0 6.501303836484407E-5 4 0.0 0.0 0.0 0.0 6.501303836484407E-5 5 0.0 0.0 0.0 0.0 6.501303836484407E-5 6 0.0 0.0 0.0 0.0 6.501303836484407E-5 7 0.0 0.0 0.0 0.0 1.3002607672968813E-4 8 0.0 0.0 0.0 0.0 1.3002607672968813E-4 9 0.0 0.0 0.0 0.0 1.3002607672968813E-4 10-11 0.0 0.0 0.0 0.0 1.3002607672968813E-4 12-13 0.0 0.0 0.0 0.0 1.6253259591211017E-4 14-15 0.0 0.0 0.0 0.0 2.2754563427695423E-4 16-17 0.0 0.0 0.0 6.501303836484407E-5 3.2506519182422033E-4 18-19 0.0 0.0 0.0 1.3002607672968813E-4 3.900782301890644E-4 20-21 0.0 0.0 0.0 1.3002607672968813E-4 4.8759778773633047E-4 22-23 0.0 0.0 0.0 1.950391150945322E-4 5.526108261011746E-4 24-25 0.0 0.0 0.0 3.2506519182422033E-4 6.501303836484407E-4 26-27 0.0 0.0 0.0 5.526108261011746E-4 6.501303836484407E-4 28-29 0.0 0.0 0.0 0.0014302868440265696 6.501303836484407E-4 30-31 0.0 0.0 0.0 0.005331069145917213 6.826369028308627E-4 32-33 0.0 0.0 0.0 0.014822972747184448 7.151434220132848E-4 34-35 0.0 0.0 0.0 0.027923099977700528 7.151434220132848E-4 36-37 0.0 0.0 0.0 0.05145781986577408 8.451694987429729E-4 38-39 0.0 0.0 0.0 0.08838522565700552 8.451694987429729E-4 40-41 0.0 0.0 0.0 0.12963599849949908 9.101825371078169E-4 42-43 0.0 0.0 0.0 0.1760228013728153 9.101825371078169E-4 44-45 0.0 0.0 0.0 0.24032069631564612 9.101825371078169E-4 46-47 0.0 0.0 0.0 0.3188239401411953 9.42689056290239E-4 48-49 0.0 0.0 0.0 0.3982048599846699 0.001040208613837505 50-51 0.0 0.0 0.0 0.4804463535161977 0.001040208613837505 52-53 0.0 0.0 0.0 0.5700343203829528 0.0011052216522023492 54-55 0.0 6.501303836484407E-5 0.0 0.6781835097028709 0.0011702346905671933 56-57 0.0 1.3002607672968813E-4 0.0 0.8089897428929371 0.0011702346905671933 58-59 0.0 1.3002607672968813E-4 0.0 0.9439893170575359 0.0011702346905671933 60-61 0.0 1.3002607672968813E-4 0.0 1.0825646083322011 0.0011702346905671933 62-63 0.0 1.3002607672968813E-4 0.0 1.2326472073974437 0.0012352477289320374 64-65 0.0 1.3002607672968813E-4 0.0 1.4035989917778011 0.0013002607672968813 66-67 6.501303836484407E-5 1.3002607672968813E-4 0.0 1.6164191728651183 0.0013327672864793033 68-69 6.501303836484407E-5 1.3002607672968813E-4 0.0 1.8465653286766661 0.0013652738056617254 70-71 6.501303836484407E-5 1.3002607672968813E-4 0.0 2.079929629887274 0.0014302868440265696 72-73 6.501303836484407E-5 1.3002607672968813E-4 0.0 2.333870557740355 0.0015603129207562576 74-75 6.501303836484407E-5 1.3002607672968813E-4 0.0 2.61108615332805 0.0015603129207562576 76-77 6.501303836484407E-5 1.3002607672968813E-4 0.0 2.9428801946230316 0.0016253259591211017 78-79 6.501303836484407E-5 1.3002607672968813E-4 0.0 3.3248968080548553 0.0016253259591211017 80-81 6.501303836484407E-5 1.3002607672968813E-4 0.0 3.708441227888253 0.0016253259591211017 82-83 6.501303836484407E-5 1.3002607672968813E-4 0.0 4.099299614537696 0.0016903389974859458 84-85 6.501303836484407E-5 1.3002607672968813E-4 0.0 4.526240237479627 0.0016903389974859458 86-87 6.501303836484407E-5 1.3002607672968813E-4 0.0 4.994301607187321 0.0016903389974859458 88-89 6.501303836484407E-5 1.3002607672968813E-4 0.0 5.525458130628097 0.0016903389974859458 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1315 0.0 57.81202 1 GTATCAA 2615 0.0 46.151512 1 TCAACGC 3905 0.0 30.510744 4 TATCAAC 3935 0.0 30.398766 2 ATCAACG 4010 0.0 29.94858 3 CAACGCA 4080 0.0 29.121708 5 AACGCAG 4420 0.0 26.772306 6 ACGCAGA 5375 0.0 21.66189 7 GTACATG 4430 0.0 21.45113 1 GTATAGG 335 1.8189894E-12 21.275038 1 CGCAGAG 5490 0.0 20.948442 8 AGAGTAC 4895 0.0 20.242403 10-11 TACATGG 4660 0.0 19.86318 2 ATAATAC 550 0.0 18.987165 3 TAAGTAC 1115 0.0 18.731731 3 CAGAGTA 5350 0.0 18.654097 9 GTAAGGT 695 0.0 18.440771 4 GGACCGT 155 9.594564E-4 18.396206 6 TAAGGTG 810 0.0 18.189203 5 GCAGAGT 5920 0.0 18.14243 9 >>END_MODULE