##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921399_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3391515 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.26137434155532 31.0 31.0 34.0 26.0 34.0 2 30.317228436259313 31.0 31.0 34.0 26.0 34.0 3 30.371980958362265 33.0 31.0 34.0 26.0 34.0 4 33.81695201112187 37.0 35.0 37.0 29.0 37.0 5 33.806554592858944 37.0 35.0 37.0 29.0 37.0 6 33.853302432688636 37.0 35.0 37.0 29.0 37.0 7 33.76170678885395 37.0 35.0 37.0 29.0 37.0 8 33.72673569186632 37.0 35.0 37.0 29.0 37.0 9 35.271254291960965 39.0 37.0 39.0 29.0 39.0 10-11 35.1713075130141 39.0 35.0 39.0 28.0 39.0 12-13 35.05647092818401 39.0 35.0 39.0 27.0 39.0 14-15 36.18920084387066 40.0 36.5 41.0 27.0 41.0 16-17 36.13770704242794 40.0 36.0 41.0 27.0 41.0 18-19 36.08508763782557 40.0 36.5 41.0 27.0 41.0 20-21 36.020650063467215 40.0 36.0 41.0 27.0 41.0 22-23 35.90526151292269 40.0 36.0 41.0 27.0 41.0 24-25 35.80936086085422 40.0 36.0 41.0 27.0 41.0 26-27 35.6658991630584 40.0 36.0 41.0 26.0 41.0 28-29 35.52859223680272 40.0 36.0 41.0 25.5 41.0 30-31 35.39113080732357 40.0 36.0 41.0 25.0 41.0 32-33 35.22422678360556 39.0 35.0 41.0 24.5 41.0 34-35 35.06602668718847 39.0 35.0 41.0 24.0 41.0 36-37 34.90522126542268 39.0 35.0 41.0 24.0 41.0 38-39 35.14299804069863 39.5 35.0 41.0 24.0 41.0 40-41 35.270373712043146 40.0 35.0 41.0 24.0 41.0 42-43 35.12015176108612 40.0 35.0 41.0 23.5 41.0 44-45 35.00926695002086 40.0 35.0 41.0 23.0 41.0 46-47 34.867409402582624 40.0 35.0 41.0 22.0 41.0 48-49 34.730451582847195 39.5 35.0 41.0 21.0 41.0 50-51 33.0209096819563 37.0 32.5 39.5 17.0 40.0 52-53 33.17347601293228 37.5 33.0 39.5 16.5 40.0 54-55 34.041650118015106 39.0 34.0 40.5 17.5 41.0 56-57 34.05632320659056 39.0 34.0 41.0 17.0 41.0 58-59 33.87935480161521 38.0 34.0 41.0 15.0 41.0 60-61 33.63922303159502 38.0 34.0 40.0 13.0 41.0 62-63 33.35283140425444 37.0 33.5 40.0 11.5 41.0 64-65 33.05699812620614 37.0 33.0 40.0 8.0 41.0 66-67 32.72046386349463 36.0 33.0 39.5 7.0 41.0 68-69 32.35528900800969 36.0 33.0 39.0 4.0 41.0 70-71 31.977478796349125 35.0 32.0 39.0 2.0 40.5 72-73 31.627252127736426 35.0 32.0 37.5 2.0 40.0 74-75 31.23650639905765 35.0 32.0 37.0 2.0 39.0 76-77 30.866712074102576 35.0 32.0 36.5 2.0 39.0 78-79 30.528559213212972 35.0 31.0 36.0 2.0 38.5 80-81 30.18691130659897 35.0 31.0 36.0 2.0 37.0 82-83 29.893502166435944 35.0 31.0 35.0 2.0 37.0 84-85 29.668861408544558 35.0 31.0 35.0 2.0 36.5 86-87 29.454631189895963 35.0 31.0 35.0 2.0 36.0 88-89 29.26373036828674 35.0 31.0 35.0 2.0 36.0 90-91 29.027600054842747 34.5 30.0 35.0 2.0 35.5 92-93 28.846773639509188 34.0 30.0 35.0 2.0 35.0 94-95 28.659594900803917 34.0 30.0 35.0 2.0 35.0 96-97 28.428402203734912 34.0 30.0 35.0 2.0 35.0 98-99 28.21174136042447 34.0 30.0 35.0 2.0 35.0 100-101 27.180433965351767 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 129043.0 3 21460.0 4 14288.0 5 10894.0 6 9585.0 7 9841.0 8 10306.0 9 11032.0 10 11932.0 11 12841.0 12 12786.0 13 12690.0 14 13530.0 15 14423.0 16 14252.0 17 14912.0 18 14116.0 19 13449.0 20 13619.0 21 14369.0 22 15688.0 23 17961.0 24 21074.0 25 25073.0 26 29763.0 27 35248.0 28 41532.0 29 49477.0 30 59570.0 31 72720.0 32 90062.0 33 116992.0 34 162712.0 35 237753.0 36 398375.0 37 726800.0 38 771443.0 39 139884.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.53945051126277 17.80708363398648 12.727849852589 24.925616002161753 2 16.096186037400308 19.04455926632008 39.188747456188025 25.6705072400916 3 19.66228213403991 22.951315846532214 28.959951573378458 28.426450446049422 4 13.433760495909022 15.161488458704046 36.088491627759055 35.316259417627876 5 14.583225784374834 36.788381113586745 34.22888797965975 14.39950512237867 6 34.5314352834733 34.681836988733735 16.623812010844258 14.16291571694871 7 29.74874499302127 31.167169023334296 20.462622275264323 18.621463708380112 8 27.219481984472804 34.89121379015431 19.192733331858765 18.696570893514114 9 26.59761580779242 15.689797849142717 19.0798193010923 38.63276704197256 10-11 26.00534449615988 25.08458235838501 27.481672347762075 21.428400797693037 12-13 26.358459787478584 22.36046295916709 27.43374890101318 23.847328352341147 14-15 23.44967265737785 24.02204289878603 24.418028062321646 28.110256381514475 16-17 23.94166719509695 27.210964608934553 25.23309674403378 23.61427145193472 18-19 23.954811640702083 26.63076103877604 26.370640867385752 23.04378645313612 20-21 24.325110274556806 25.83002322873521 26.45810746563763 23.38675903107035 22-23 24.216171617161717 25.597395724556364 26.18369988589849 24.00273277238342 24-25 24.035399331675674 25.793183457638158 26.181267008060626 23.99015020262554 26-27 23.898744451729566 25.967218123971563 26.1596987557186 23.974338668580263 28-29 23.98335039650304 26.097610571330364 26.103626794784702 23.815412237381892 30-31 24.220800293946652 25.841605866429735 26.024172453028765 23.913421386594848 32-33 23.933596112511637 25.925509268583536 25.983601022296916 24.15729359660791 34-35 24.25869226938051 25.93094544915182 25.994787100624762 23.815575180842906 36-37 24.31629543367423 25.75223682602389 26.05933093584682 23.87213680445506 38-39 24.132313701368417 25.950501417012823 26.00251703703223 23.914667844586525 40-41 24.234290019298843 25.795727127037694 26.056047732570224 23.91393512109324 42-43 24.11583942511686 25.7530271781204 26.003297541027205 24.127835855735537 44-45 24.04177870402714 25.87852922301152 26.06173753975926 24.017954533202076 46-47 24.29312278555036 25.78071005076349 25.886544255462645 24.0396229082235 48-49 24.105580450086755 25.919817929291327 25.85729316051702 24.1173084601049 50-51 24.07885452788299 25.99726538457505 25.96967403957231 23.95420604796965 52-53 24.2593685934558 25.829561385614895 25.91359471356659 23.997475307362716 54-55 23.90275814690176 25.782511869489454 26.22060064498414 24.094129338624647 56-57 23.978208880215167 25.916411928271536 26.020661028223778 24.084718163289516 58-59 24.103141878432375 25.76933854825484 26.08924169099005 24.03827788232274 60-61 23.9982745427095 25.85609568015222 26.174758687116096 23.97087109002219 62-63 24.042264847974888 25.88362231970654 26.194653949060243 23.879458883258327 64-65 23.849761415966437 25.73543282752622 26.197946527217752 24.21685922928959 66-67 23.862350777128064 25.82891173710571 26.10744977356691 24.20128771219932 68-69 23.97575994624613 25.702391849357998 26.166785596172122 24.15506260822376 70-71 23.863155379422768 25.602297629030442 26.163664273475394 24.370882718071396 72-73 23.907981024560872 25.774050840340664 26.07626715733371 24.241700977764754 74-75 23.86119738142599 25.813666753905206 26.161267034407626 24.16386883026118 76-77 23.915464039029956 25.64617558429958 26.164563443694018 24.27379693297645 78-79 23.842887269584615 25.600319100609028 26.207437555630243 24.349356074176118 80-81 23.915807582476813 25.763084831264127 26.075682342539974 24.245425243719094 82-83 23.926957464197933 25.726796840234705 26.19079207470255 24.155453620864805 84-85 23.940598684491416 25.72056692472279 26.12866621233661 24.210168178449184 86-87 23.805751730406993 25.81277856287121 26.18131934704656 24.200150359675238 88-89 23.726460724618644 25.65525951880726 26.22589518655073 24.392384570023363 90-91 23.76540418950219 25.677840484967117 26.246667387710694 24.31008793782 92-93 23.90856599433868 25.546187991481272 26.376369210182695 24.168876803997353 94-95 23.834016265045285 25.448240436098992 26.370878026347057 24.34686527250867 96-97 23.815643212674832 25.260554207658963 26.473409919605988 24.450392660060217 98-99 23.70037465358765 25.30466924316429 26.37670601846892 24.618250084779135 100-101 23.899586135800536 25.235002336353997 26.475663939787385 24.389747588058082 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 38.0 2 58.0 3 91.5 4 83.0 5 88.0 6 165.0 7 315.5 8 480.5 9 559.0 10 517.0 11 472.0 12 520.0 13 583.0 14 680.5 15 791.0 16 873.5 17 972.5 18 1048.0 19 1145.5 20 1270.0 21 1399.5 22 1594.5 23 1814.0 24 2078.0 25 2489.0 26 3180.0 27 4319.0 28 6157.0 29 8993.5 30 13158.0 31 18911.0 32 26724.5 33 33770.5 34 40246.0 35 47807.5 36 57384.5 37 67781.0 38 76944.5 39 86053.0 40 94241.0 41 102556.5 42 110037.0 43 116898.5 44 123687.5 45 130940.0 46 136791.5 47 140618.0 48 144390.0 49 146586.0 50 146555.0 51 146314.0 52 145552.0 53 142892.0 54 139870.0 55 134620.0 56 126301.0 57 115341.5 58 104115.5 59 90959.0 60 75776.0 61 62876.0 62 51325.5 63 39223.5 64 28419.0 65 20874.0 66 15620.5 67 11894.5 68 9022.5 69 6969.5 70 5191.0 71 3649.5 72 2646.0 73 1920.5 74 1385.5 75 1011.0 76 731.5 77 485.0 78 308.5 79 240.0 80 197.0 81 153.5 82 129.5 83 107.0 84 84.0 85 69.5 86 58.5 87 47.0 88 39.5 89 36.5 90 39.5 91 31.5 92 20.5 93 17.5 94 17.0 95 17.0 96 12.5 97 9.5 98 6.0 99 3.5 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0493289871930391 2 0.0565234121034405 3 0.0484739121012291 4 0.05487223261580739 5 0.04676376191760909 6 0.01757326740409522 7 0.01468370330073728 8 0.020344890115479363 9 0.02007952198353833 10-11 0.021730701471171437 12-13 0.026300930410155934 14-15 0.0439036831622446 16-17 0.028600787553644907 18-19 0.022836402020925753 20-21 0.026153503670188694 22-23 0.0457317747378384 24-25 0.04111731777686373 26-27 0.030782703305160083 28-29 0.02015323535352195 30-31 0.01248704487522538 32-33 0.00967119414185106 34-35 0.009199428573955887 36-37 0.0013710686816953484 38-39 0.006663688646519329 40-41 0.0035382417592138026 42-43 0.21155737185299195 44-45 0.185683978988741 46-47 0.1917579606753914 48-49 0.1903721493196993 50-51 0.18857354309209895 52-53 0.19308480133509656 54-55 0.19078494419160758 56-57 0.20148812551322934 58-59 0.19874598814983865 60-61 0.2035963278947609 62-63 0.20082470518337675 64-65 0.20222525921306553 66-67 0.19222972624328655 68-69 0.1903721493196993 70-71 0.17508399638509634 72-73 0.1825585321014355 74-75 0.18165922898763534 76-77 0.18031764565393343 78-79 0.2064711493241221 80-81 0.21497767222023195 82-83 0.212677815076743 84-85 0.20770953393984695 86-87 0.22494371984201753 88-89 0.22318934163640733 90-91 0.22211312643464648 92-93 0.22631478852371284 94-95 0.2377403608711741 96-97 0.23747499273923306 98-99 0.2277005998794049 100-101 0.2370032271713379 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3391515.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.35241637080916 #Duplication Level Percentage of deduplicated Percentage of total 1 76.77354106807698 44.79921634665844 2 12.565521886015516 14.66457130018585 3 4.339497735417066 7.596605360917201 4 2.052546099666489 4.790840985120773 5 1.1329889597051601 3.3056321760122716 6 0.7078689987767555 2.478351993156542 7 0.4843101521145489 1.978246735415866 8 0.3332977051553561 1.5558981173328421 9 0.2661858441033977 1.397932848642308 >10 1.2688418227527822 12.96824146982574 >50 0.057075276544939525 2.2452192210230346 >100 0.017058709268866608 1.5830209216529063 >500 8.100751403709916E-4 0.3344341304089015 >1k 4.556672617452497E-4 0.301788393647325 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.897069598689671E-5 2 0.0 0.0 0.0 0.0 5.897069598689671E-5 3 0.0 0.0 0.0 0.0 5.897069598689671E-5 4 0.0 0.0 0.0 0.0 5.897069598689671E-5 5 0.0 0.0 0.0 0.0 5.897069598689671E-5 6 0.0 0.0 0.0 0.0 8.845604398034506E-5 7 0.0 0.0 0.0 0.0 1.1794139197379342E-4 8 0.0 0.0 0.0 0.0 1.1794139197379342E-4 9 0.0 0.0 0.0 0.0 1.1794139197379342E-4 10-11 0.0 0.0 0.0 0.0 1.1794139197379342E-4 12-13 0.0 0.0 0.0 0.0 1.1794139197379342E-4 14-15 0.0 0.0 0.0 0.0 1.1794139197379342E-4 16-17 0.0 0.0 0.0 0.0 1.1794139197379342E-4 18-19 0.0 0.0 0.0 0.0 1.1794139197379342E-4 20-21 0.0 0.0 0.0 2.9485347993448354E-5 1.1794139197379342E-4 22-23 0.0 0.0 0.0 1.4742673996724179E-4 1.3268406597051761E-4 24-25 0.0 0.0 0.0 3.243388279279319E-4 1.7691208796069013E-4 26-27 0.0 0.0 0.0 5.602216118755187E-4 1.7691208796069013E-4 28-29 0.0 0.0 0.0 0.00197551831556104 1.7691208796069013E-4 30-31 0.0 0.0 0.0 0.007857845240253987 1.916547619574143E-4 32-33 0.0 0.0 0.0 0.021376877295250056 2.063974359541385E-4 34-35 0.0 1.4742673996724177E-5 0.0 0.03878797528538132 2.063974359541385E-4 36-37 0.0 2.9485347993448354E-5 0.0 0.06623883426728173 2.063974359541385E-4 38-39 0.0 4.422802199017253E-5 0.0 0.11253083061699565 2.063974359541385E-4 40-41 0.0 5.897069598689671E-5 0.0 0.16706398173087839 2.3588278394758683E-4 42-43 0.0 5.897069598689671E-5 0.0 0.2232777976803877 2.3588278394758683E-4 44-45 0.0 5.897069598689671E-5 0.0 0.29208185722309943 2.3588278394758683E-4 46-47 0.0 5.897069598689671E-5 0.0 0.3741838087108563 2.5062545794431103E-4 48-49 0.0 5.897069598689671E-5 0.0 0.4626840807131916 2.653681319410352E-4 50-51 0.0 5.897069598689671E-5 0.0 0.5563148032663869 2.653681319410352E-4 52-53 0.0 5.897069598689671E-5 0.0 0.6552234031104094 2.801108059377594E-4 54-55 0.0 8.845604398034506E-5 0.0 0.76647162108969 2.9485347993448357E-4 56-57 0.0 8.845604398034506E-5 0.0 0.89635457900083 2.9485347993448357E-4 58-59 0.0 8.845604398034506E-5 0.0 1.0384886990032478 2.9485347993448357E-4 60-61 0.0 8.845604398034506E-5 0.0 1.1925348995950187 2.9485347993448357E-4 62-63 0.0 8.845604398034506E-5 0.0 1.3534217009212697 3.243388279279319E-4 64-65 0.0 8.845604398034506E-5 0.0 1.5274294821046053 3.243388279279319E-4 66-67 0.0 8.845604398034506E-5 0.0 1.731571288937245 3.5382417592138025E-4 68-69 0.0 8.845604398034506E-5 0.0 1.9510602194004742 3.5382417592138025E-4 70-71 0.0 8.845604398034506E-5 0.0 2.1894492579275044 3.5382417592138025E-4 72-73 0.0 8.845604398034506E-5 0.0 2.4384825070801694 3.8330952391482865E-4 74-75 0.0 8.845604398034506E-5 0.0 2.7018308926836534 3.8330952391482865E-4 76-77 0.0 8.845604398034506E-5 0.0 2.993883264558759 3.8330952391482865E-4 78-79 0.0 1.1794139197379342E-4 0.0 3.3297361208781324 3.8330952391482865E-4 80-81 0.0 1.1794139197379342E-4 1.4742673996724177E-5 3.685521072441077 3.8330952391482865E-4 82-83 0.0 1.1794139197379342E-4 2.9485347993448354E-5 4.060043962653858 4.4228021990172533E-4 84-85 0.0 1.1794139197379342E-4 2.9485347993448354E-5 4.446228307998048 4.4228021990172533E-4 86-87 0.0 1.1794139197379342E-4 2.9485347993448354E-5 4.85616310115096 4.4228021990172533E-4 88-89 0.0 1.1794139197379342E-4 2.9485347993448354E-5 5.298885601272588 4.4228021990172533E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2630 0.0 43.846756 1 GTATCAA 4555 0.0 40.631527 1 TCAACGC 5035 0.0 35.158337 4 CAACGCA 5060 0.0 34.981533 5 ATCAACG 5270 0.0 33.49902 3 TATCAAC 5460 0.0 32.16231 2 AACGCAG 5525 0.0 32.116646 6 GTACATG 8400 0.0 26.157042 1 ACGCAGA 6545 0.0 25.808527 7 TACATGG 9025 0.0 24.085545 2 CGCAGAG 6890 0.0 23.967775 8 ACATGGG 9285 0.0 22.591242 3 CATGGGG 7880 0.0 19.814753 4 GTATAGC 970 0.0 19.569294 1 GAGTACA 6470 0.0 19.14358 1 GCAGAGT 8450 0.0 18.812904 9 GTGTAGC 1720 0.0 17.657877 1 AGAGTAC 6575 0.0 17.213404 10-11 GTCTTAG 1080 0.0 17.136723 1 GTATATA 1330 0.0 17.126812 1 >>END_MODULE