Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921399_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3391515 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2280 | 0.0 | 44.410923 | 1 |
GTATCAA | 4015 | 0.0 | 40.96714 | 1 |
TCAACGC | 4825 | 0.0 | 32.263397 | 4 |
CAACGCA | 4840 | 0.0 | 32.222805 | 5 |
ATCAACG | 5135 | 0.0 | 30.408083 | 3 |
TATCAAC | 5255 | 0.0 | 30.346357 | 2 |
AACGCAG | 5275 | 0.0 | 29.653519 | 6 |
GTACATG | 8290 | 0.0 | 24.658066 | 1 |
TACATGG | 8865 | 0.0 | 22.646528 | 2 |
ACGCAGA | 6680 | 0.0 | 22.63359 | 7 |
CGCAGAG | 6850 | 0.0 | 21.933065 | 8 |
ACATGGG | 9040 | 0.0 | 21.210287 | 3 |
CATGGGG | 7380 | 0.0 | 19.614492 | 4 |
GAGTACA | 6470 | 0.0 | 17.92795 | 1 |
GCAGAGT | 8505 | 0.0 | 16.93835 | 9 |
AGAGTAC | 6880 | 0.0 | 16.689045 | 10-11 |
ATGGGGG | 4505 | 0.0 | 15.304111 | 5 |
TATACAG | 2035 | 0.0 | 15.187414 | 5 |
AGTACAT | 6795 | 0.0 | 15.017201 | 2 |
CAGAGTA | 7630 | 0.0 | 14.799325 | 10-11 |