##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921398_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3070597 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.317723231019897 31.0 31.0 34.0 26.0 34.0 2 30.377870817954946 31.0 31.0 34.0 26.0 34.0 3 30.430565782484646 33.0 31.0 34.0 26.0 34.0 4 33.88177641025507 37.0 35.0 37.0 30.0 37.0 5 33.87676402992643 37.0 35.0 37.0 30.0 37.0 6 33.92120066553833 37.0 35.0 37.0 30.0 37.0 7 33.83623380078858 37.0 35.0 37.0 29.0 37.0 8 33.79814739609268 37.0 35.0 37.0 29.0 37.0 9 35.35185340179776 39.0 37.0 39.0 29.0 39.0 10-11 35.24786694574377 39.0 35.0 39.0 29.0 39.0 12-13 35.13515221958466 39.0 35.0 39.0 28.0 39.0 14-15 36.26789481003206 40.0 37.0 41.0 27.0 41.0 16-17 36.22083620872423 40.0 37.0 41.0 27.0 41.0 18-19 36.173100703218296 40.0 36.5 41.0 27.0 41.0 20-21 36.115538932657074 40.0 36.5 41.0 27.0 41.0 22-23 36.00020110095854 40.0 36.0 41.0 27.0 41.0 24-25 35.909023880372445 40.0 36.0 41.0 27.0 41.0 26-27 35.76617152951039 40.0 36.0 41.0 27.0 41.0 28-29 35.62940936241389 40.0 36.0 41.0 26.0 41.0 30-31 35.49153633641927 40.0 36.0 41.0 25.0 41.0 32-33 35.32096983094819 39.5 35.0 41.0 25.0 41.0 34-35 35.16141421358778 39.0 35.0 41.0 24.5 41.0 36-37 34.998628116942726 39.0 35.0 41.0 24.0 41.0 38-39 35.23157239455389 39.5 35.0 41.0 24.5 41.0 40-41 35.35935943401235 40.0 35.0 41.0 24.5 41.0 42-43 35.20480903225008 40.0 35.0 41.0 24.0 41.0 44-45 35.096278834376506 40.0 35.0 41.0 23.0 41.0 46-47 34.957191875065334 40.0 35.0 41.0 23.0 41.0 48-49 34.828107856550375 40.0 35.0 41.0 22.0 41.0 50-51 33.1322930036081 37.0 32.5 39.5 18.0 40.0 52-53 33.287460223533074 37.5 33.5 39.5 17.0 40.0 54-55 34.156930394968796 39.0 34.0 40.5 18.5 41.0 56-57 34.183097781962275 39.0 34.0 41.0 18.0 41.0 58-59 34.01774426927402 38.5 34.0 41.0 18.0 41.0 60-61 33.78427289546626 38.0 34.0 40.5 15.0 41.0 62-63 33.51381864829543 37.5 34.0 40.0 13.0 41.0 64-65 33.23047684212549 37.0 33.5 40.0 12.0 41.0 66-67 32.895089945049776 36.5 33.0 39.5 8.0 41.0 68-69 32.53701218362423 36.0 33.0 39.0 7.0 41.0 70-71 32.16234904808414 35.5 32.5 39.0 3.5 41.0 72-73 31.805464051453185 35.0 32.0 38.5 2.0 40.0 74-75 31.407894132639353 35.0 32.0 37.0 2.0 39.5 76-77 31.026920009366258 35.0 32.0 37.0 2.0 39.0 78-79 30.67499968247217 35.0 31.5 36.0 2.0 39.0 80-81 30.32285936578457 35.0 31.0 36.0 2.0 37.0 82-83 30.017600974663885 35.0 31.0 35.5 2.0 37.0 84-85 29.77814705088294 35.0 31.0 35.0 2.0 36.5 86-87 29.55466949912346 35.0 31.0 35.0 2.0 36.0 88-89 29.354605472486295 35.0 31.0 35.0 2.0 36.0 90-91 29.10551921987809 35.0 30.5 35.0 2.0 36.0 92-93 28.921507283437066 34.0 30.0 35.0 2.0 35.0 94-95 28.7237967079366 34.0 30.0 35.0 2.0 35.0 96-97 28.48462188297585 34.0 30.0 35.0 2.0 35.0 98-99 28.268675765657296 34.0 30.0 35.0 2.0 35.0 100-101 27.2316984286769 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 111888.0 3 18737.0 4 12482.0 5 9512.0 6 8534.0 7 8605.0 8 8952.0 9 9859.0 10 10612.0 11 11480.0 12 11550.0 13 11629.0 14 12305.0 15 13066.0 16 13302.0 17 13977.0 18 12912.0 19 12250.0 20 12499.0 21 12880.0 22 14198.0 23 16121.0 24 18963.0 25 22629.0 26 26837.0 27 31854.0 28 37669.0 29 44539.0 30 54118.0 31 64796.0 32 80660.0 33 105376.0 34 146198.0 35 211597.0 36 351283.0 37 644225.0 38 723586.0 39 138898.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.5705790929618 18.37956280485222 13.23504208060317 24.814816021582804 2 15.710280084525538 19.518132748106403 39.91345419116652 24.85813297620153 3 19.26446448481626 23.60959331251967 29.343157590176787 27.782784612487283 4 13.33102850739494 15.623656898527594 36.80063005816698 34.24468453591048 5 14.329663254640382 37.10216920418201 34.48534835771798 14.082819183459621 6 33.49685789844496 35.23130838001237 17.205485591738846 14.066348129803826 7 28.96442822668142 31.67780561202205 21.038942934225883 18.31882322707065 8 26.465190607353286 35.19806018027503 19.80132743708746 18.535421775284235 9 26.60118756203202 15.947266226208775 19.459691523123713 37.99185468863549 10-11 25.56814415445045 25.362732271213396 27.928344934305493 21.140778640030657 12-13 26.094278973441842 22.7012099430821 27.761601226149494 23.442909857326562 14-15 23.24761593531674 24.401259207104836 24.935171099750328 27.415953757828092 16-17 23.52634861459431 27.491251985334706 25.760755175633815 23.22164422443717 18-19 23.524622298259246 26.958324829930586 26.95058829431215 22.566464577498017 20-21 23.988951620666228 26.151637019237423 26.940751127567637 22.918660232528705 22-23 23.83702858498275 25.890095804590434 26.669021270938924 23.60385433948789 24-25 23.640219983579424 26.067141907653813 26.68397234566614 23.60866576310062 26-27 23.520603509133135 26.342198304886523 26.619412590437925 23.51778559554242 28-29 23.582367060928174 26.508073886328777 26.504897948148493 23.404661104594556 30-31 23.87259588881251 26.218156015756062 26.41845348983212 23.49079460559931 32-33 23.630840875695114 26.26668440669459 26.341563826888816 23.760910890721483 34-35 23.87209835190981 26.307575756095293 26.420920430410117 23.399405461584784 36-37 23.928817138990908 26.17504887165704 26.454331767106304 23.441802222245745 38-39 23.812443420897715 26.32497489308697 26.387345236460952 23.475236449554362 40-41 23.930764210230116 26.144843254960815 26.442941522844755 23.481451011964317 42-43 23.70687418513158 26.168996571637436 26.341997522963172 23.782131720267806 44-45 23.67705231039082 26.198817854597944 26.450079218619898 23.674050616391337 46-47 23.82600467413604 26.125728549345578 26.273718385342953 23.774548391175426 48-49 23.640783620720317 26.26645336284696 26.288477645679208 23.804285370753515 50-51 23.698168047351178 26.294564047213488 26.400148523032733 23.607119382402598 52-53 23.957357341581602 26.134257744864183 26.32639573312381 23.58198918043041 54-55 23.528215050746144 26.03165332415373 26.605057810305194 23.835073814794935 56-57 23.602171222298036 26.15985777541085 26.422009307382826 23.815961694908285 58-59 23.693667617980417 26.075644779924122 26.53551894023692 23.69516866185854 60-61 23.692318536501713 26.097941070365376 26.604943539214332 23.60479685391858 62-63 23.691253880349645 26.08883924477864 26.57716042433314 23.642746450538574 64-65 23.503861555083983 25.931646869133306 26.56166430462476 24.00282727115795 66-67 23.52300975494122 26.104880505110607 26.44588661179876 23.926223128149417 68-69 23.607780259737886 25.984719304668324 26.55280212426202 23.854698311331767 70-71 23.528205660216702 25.819196819614724 26.56116601077419 24.091431509394383 72-73 23.514623547265867 26.017951807798887 26.425564825510406 24.04185981942484 74-75 23.45822444511871 26.13136078458241 26.492135579285303 23.918279191013582 76-77 23.531483458018275 25.817442059060873 26.55672663321616 24.094347849704686 78-79 23.403084670826814 25.826122910380594 26.657059296142627 24.113733122649965 80-81 23.542793753148416 25.99135879286151 26.39192477773214 24.07392267625793 82-83 23.617384924723485 25.994720151378726 26.52660501295159 23.861289910946205 84-85 23.57639762539035 25.991947134878963 26.49355421602212 23.938101023708565 86-87 23.39717106410924 26.124270354631275 26.49847090059948 23.980087680660006 88-89 23.371037109243357 25.891296993245046 26.582100408600372 24.155565488911225 90-91 23.434440824920674 25.860932496743 26.62157647785721 24.083050200479114 92-93 23.498652757400045 25.733688245940726 26.73293261502155 24.03472638163768 94-95 23.5224546737024 25.665655398537957 26.723120749397182 24.088769178362462 96-97 23.42637008464826 25.52569129574464 26.8279207207466 24.2200178988605 98-99 23.286490562219335 25.479078246550035 26.80225256579844 24.432178625432186 100-101 23.49891164688001 25.39166348931103 26.890336181636798 24.219088682172163 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 46.0 1 43.5 2 66.0 3 90.5 4 91.0 5 119.5 6 182.5 7 344.0 8 552.5 9 611.5 10 547.5 11 528.0 12 569.5 13 598.5 14 666.0 15 745.0 16 864.5 17 984.5 18 1092.5 19 1211.0 20 1349.0 21 1556.0 22 1710.5 23 1907.5 24 2212.0 25 2709.5 26 3547.5 27 4770.5 28 6615.5 29 9650.0 30 13902.5 31 19461.5 32 27170.0 33 34195.5 34 40649.0 35 48272.5 36 57367.0 37 67255.0 38 76492.5 39 85135.5 40 92129.0 41 98827.0 42 105500.0 43 111991.0 44 118272.0 45 124257.5 46 128279.0 47 131704.5 48 135285.5 49 135967.0 50 134330.0 51 132302.0 52 129560.0 53 125815.5 54 121089.5 55 114115.0 56 105003.0 57 94226.5 58 83662.0 59 72182.5 60 59454.0 61 48481.5 62 39382.5 63 30225.5 64 21677.0 65 15710.5 66 11672.0 67 8816.0 68 6649.5 69 4932.5 70 3720.5 71 2698.5 72 1819.5 73 1262.5 74 946.0 75 700.0 76 525.5 77 359.5 78 240.5 79 175.5 80 127.5 81 94.0 82 74.5 83 67.5 84 63.0 85 53.0 86 40.5 87 35.5 88 32.0 89 27.5 90 27.0 91 24.0 92 19.0 93 20.0 94 20.0 95 16.5 96 16.0 97 12.5 98 7.0 99 6.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04842706483462336 2 0.05542896055718155 3 0.04751519004284834 4 0.05451708576540653 5 0.0473197883017537 6 0.016869683647837863 7 0.014264327099909236 8 0.02022408020329597 9 0.019865843677955786 10-11 0.021738443696779488 12-13 0.02685145592208942 14-15 0.0444213291421831 16-17 0.029326544642621615 18-19 0.024343800244708114 20-21 0.026884022878938523 22-23 0.046668449164771544 24-25 0.04158800389631072 26-27 0.030938609006652452 28-29 0.020777718469730803 30-31 0.013466436657106094 32-33 0.010665678368082819 34-35 0.010291158364318079 36-37 0.0017748991482763776 38-39 0.007408982683172035 40-41 0.004331405260931343 42-43 0.2101220055904438 44-45 0.1843615427227995 46-47 0.1908260836573474 48-49 0.1888232158111273 50-51 0.18734141927449288 52-53 0.19124945409638583 54-55 0.18993049234399695 56-57 0.20022165070831505 58-59 0.19745345937614087 60-61 0.2023547863819316 62-63 0.1992446420028418 64-65 0.20054732027680613 66-67 0.19027244539091256 68-69 0.18937685407756213 70-71 0.17286540695506444 72-73 0.18099086268891684 74-75 0.17999757050501908 76-77 0.17819010439989358 78-79 0.2046181898829446 80-81 0.21355781953802472 82-83 0.21148981777810633 84-85 0.2066699081644384 86-87 0.2235884422475499 88-89 0.22293710311056775 90-91 0.22182982657769806 92-93 0.2257541448780156 94-95 0.23713629629677876 96-97 0.23687576064198593 98-99 0.22730107532834817 100-101 0.23620813802657917 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3070597.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.83311733678383 #Duplication Level Percentage of deduplicated Percentage of total 1 79.98796960857581 50.258934799467426 2 11.307550775776491 14.209773293720104 3 3.5434248450312613 6.67933287185773 4 1.647027240076757 4.139514233304883 5 0.897828822037269 2.820669186170706 6 0.5841916231082487 2.2023948481156066 7 0.3979950658555197 1.7505089470652613 8 0.2820947797002071 1.4179915514397836 9 0.20992521806693681 1.1871230272874795 >10 1.0872044995832397 11.756481884932866 >50 0.041710397153952014 1.7672103155615115 >100 0.011932069236084517 1.2227778303690344 >500 9.368638351063553E-4 0.42648471526365 >1k 2.0819196310391995E-4 0.16080249544394573 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.256695684910785E-5 2 0.0 0.0 0.0 0.0 6.51339136982157E-5 3 0.0 0.0 0.0 0.0 6.51339136982157E-5 4 0.0 0.0 0.0 0.0 6.51339136982157E-5 5 0.0 0.0 0.0 0.0 6.51339136982157E-5 6 0.0 0.0 0.0 0.0 9.770087054732354E-5 7 0.0 0.0 0.0 0.0 9.770087054732354E-5 8 0.0 0.0 0.0 0.0 9.770087054732354E-5 9 0.0 0.0 0.0 6.51339136982157E-5 1.302678273964314E-4 10-11 0.0 0.0 0.0 6.51339136982157E-5 1.302678273964314E-4 12-13 0.0 0.0 0.0 6.51339136982157E-5 2.768191332174167E-4 14-15 0.0 0.0 0.0 6.51339136982157E-5 3.2566956849107843E-4 16-17 0.0 0.0 0.0 8.141739212276961E-5 3.9080348218929414E-4 18-19 0.0 0.0 0.0 1.302678273964314E-4 4.7222087431206375E-4 20-21 0.0 0.0 0.0 1.7911826267009314E-4 5.210713095857254E-4 22-23 0.0 0.0 0.0 2.11685219519201E-4 6.024887017084951E-4 24-25 0.0 0.0 0.0 3.582365253401863E-4 6.839060938312648E-4 26-27 0.0 0.0 0.0 7.816069643785883E-4 7.490400075294804E-4 28-29 0.0 0.0 0.0 0.002523939155805858 7.816069643785883E-4 30-31 0.0 0.0 0.0 0.009900354882128783 7.816069643785883E-4 32-33 0.0 0.0 0.0 0.02686773940051397 7.816069643785883E-4 34-35 0.0 0.0 0.0 0.04950177441064392 8.141739212276961E-4 36-37 0.0 0.0 0.0 0.08561852955630453 8.141739212276961E-4 38-39 0.0 0.0 0.0 0.14560686407236118 8.141739212276961E-4 40-41 0.0 0.0 0.0 0.21500704911781 8.141739212276961E-4 42-43 0.0 0.0 0.0 0.28601929852728963 8.3045739965225E-4 44-45 0.0 0.0 0.0 0.37127959155825396 8.630243565013579E-4 46-47 0.0 0.0 0.0 0.46963180124255965 9.932921838977891E-4 48-49 0.0 0.0 0.0 0.5767445223192753 0.0010421426191714511 50-51 0.0 0.0 0.0 0.6886445860528099 0.0010421426191714511 52-53 0.0 0.0 0.0 0.807025474199317 0.001074709576020559 54-55 0.0 0.0 0.0 0.9419666599035953 0.0011398434897187744 56-57 0.0 0.0 0.0 1.0989231084378706 0.0011886939249924362 58-59 0.0 0.0 0.0 1.2649006040193487 0.0012049774034169902 60-61 0.0 0.0 0.0 1.4396060440363878 0.0012375443602660981 62-63 0.0 0.0 0.0 1.6239838702376117 0.001270111317115206 64-65 0.0 0.0 0.0 1.8272993818465921 0.001270111317115206 66-67 0.0 0.0 0.0 2.06117898245846 0.001270111317115206 68-69 0.0 0.0 0.0 2.318718477221205 0.001270111317115206 70-71 3.256695684910785E-5 0.0 0.0 2.5929485373691175 0.001270111317115206 72-73 3.256695684910785E-5 0.0 0.0 2.873317468883087 0.0014329461013607451 74-75 3.256695684910785E-5 0.0 0.0 3.172314699714746 0.0014329461013607451 76-77 3.256695684910785E-5 0.0 0.0 3.5136815414070943 0.0014329461013607451 78-79 3.256695684910785E-5 1.6283478424553924E-5 0.0 3.895187157415968 0.001449229579785299 80-81 3.256695684910785E-5 3.256695684910785E-5 0.0 4.287016498746009 0.001465513058209853 82-83 3.256695684910785E-5 3.256695684910785E-5 0.0 4.70276626988172 0.001465513058209853 84-85 3.256695684910785E-5 3.256695684910785E-5 0.0 5.1332525889916525 0.001481796536634407 86-87 3.256695684910785E-5 3.256695684910785E-5 0.0 5.602477303273599 0.0015143634934835148 88-89 3.256695684910785E-5 3.256695684910785E-5 0.0 6.115553424952868 0.0015306469719080687 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3990 0.0 42.336853 1 GGTATCA 2405 0.0 41.432934 1 TCAACGC 4845 0.0 33.696434 4 CAACGCA 5010 0.0 32.2988 5 ATCAACG 5120 0.0 31.790768 3 TATCAAC 5195 0.0 31.423662 2 AACGCAG 5445 0.0 30.060692 6 GTACATG 8080 0.0 29.362978 1 TACATGG 8330 0.0 28.313612 2 ACATGGG 8615 0.0 27.045998 3 ACGCAGA 6500 0.0 24.892082 7 CATGGGG 7375 0.0 24.131733 4 CGCAGAG 6780 0.0 23.376118 8 ATGGGGG 4680 0.0 20.786327 5 GCAGAGT 8040 0.0 18.532597 9 GAGTACA 5875 0.0 18.253326 1 GTATAGC 1025 0.0 18.054365 1 AGAGTAC 6590 0.0 17.497805 10-11 GTATATG 1195 0.0 16.677187 1 AGTACAT 6115 0.0 16.452175 2 >>END_MODULE