##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921398_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3070597 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.424774726217734 33.0 31.0 34.0 29.0 34.0 2 31.55877798356476 34.0 31.0 34.0 29.0 34.0 3 31.63700935029898 34.0 31.0 34.0 28.0 34.0 4 35.12056775929892 37.0 35.0 37.0 33.0 37.0 5 34.86158424566949 37.0 35.0 37.0 32.0 37.0 6 34.81755762804432 37.0 35.0 37.0 32.0 37.0 7 34.68504658866012 37.0 35.0 37.0 32.0 37.0 8 34.649129143290374 37.0 35.0 37.0 32.0 37.0 9 36.271603860747604 39.0 37.0 39.0 32.0 39.0 10-11 36.123548612859324 39.0 37.0 39.0 32.0 39.0 12-13 36.05910055927235 39.0 37.0 39.0 32.0 39.0 14-15 37.313233713183465 40.0 38.0 41.0 32.0 41.0 16-17 37.29533914740358 40.0 38.0 41.0 31.5 41.0 18-19 37.25957216137448 40.0 38.0 41.0 31.0 41.0 20-21 37.22367653586583 40.0 38.0 41.0 31.0 41.0 22-23 37.115648031962515 40.0 38.0 41.0 31.0 41.0 24-25 37.056653478134706 40.0 38.0 41.0 31.0 41.0 26-27 36.92491867216701 40.0 37.0 41.0 30.0 41.0 28-29 36.77667323325073 40.0 37.0 41.0 30.0 41.0 30-31 36.650187080883626 40.0 37.0 41.0 30.0 41.0 32-33 36.60417860109939 40.0 37.0 41.0 30.0 41.0 34-35 36.734636619523826 40.0 37.0 41.0 30.0 41.0 36-37 36.718241273602494 40.0 37.0 41.0 30.0 41.0 38-39 36.636987204768324 40.0 37.0 41.0 30.0 41.0 40-41 36.52580556810288 40.0 37.0 41.0 30.0 41.0 42-43 36.428728680448785 40.0 37.0 41.0 30.0 41.0 44-45 36.300436201820034 40.0 36.5 41.0 29.0 41.0 46-47 36.15920861643518 40.0 36.0 41.0 28.5 41.0 48-49 36.01533447730197 40.0 36.0 41.0 28.0 41.0 50-51 35.87065235196934 40.0 35.5 41.0 28.0 41.0 52-53 35.70694379627154 39.5 35.0 41.0 28.0 41.0 54-55 35.50717857146346 39.0 35.0 41.0 27.0 41.0 56-57 35.25523375421783 39.0 35.0 41.0 26.0 41.0 58-59 35.04135531298962 39.0 35.0 41.0 26.0 41.0 60-61 34.77567489318852 38.0 35.0 40.0 26.0 41.0 62-63 34.48832621148266 38.0 34.0 40.0 26.0 41.0 64-65 34.18430210802655 37.0 34.0 40.0 26.0 41.0 66-67 33.851540270507655 37.0 34.0 39.5 25.0 41.0 68-69 33.490753101107046 36.0 34.0 39.0 24.0 41.0 70-71 33.110935267636876 36.0 34.0 39.0 23.5 40.5 72-73 32.712905340557555 35.0 33.0 38.0 22.0 40.0 74-75 32.30239038206577 35.0 33.0 37.0 21.5 39.0 76-77 29.538102199669964 33.0 29.0 34.5 15.0 36.5 78-79 31.191056494877053 34.5 31.5 36.0 19.0 38.0 80-81 31.376025737014658 35.0 32.0 36.0 20.0 37.0 82-83 31.206621383398733 35.0 32.5 35.5 19.5 37.0 84-85 30.968547484414266 35.0 32.0 35.0 18.0 36.5 86-87 30.722052096058192 35.0 32.0 35.0 16.0 36.0 88-89 30.440599987559423 35.0 32.0 35.0 10.0 36.0 90-91 30.259547898991627 35.0 32.0 35.0 4.5 35.5 92-93 30.117071045142033 34.0 32.0 35.0 3.5 35.0 94-95 30.02509984214796 34.0 32.0 35.0 2.0 35.0 96-97 29.842206906344273 34.0 31.5 35.0 2.0 35.0 98-99 29.58832924020964 34.0 31.0 35.0 2.0 35.0 100-101 28.51299144759146 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57222.0 3 19528.0 4 10495.0 5 7245.0 6 6358.0 7 6234.0 8 6552.0 9 6991.0 10 7858.0 11 8617.0 12 8981.0 13 9709.0 14 10532.0 15 11686.0 16 12331.0 17 13498.0 18 12588.0 19 11078.0 20 10669.0 21 10392.0 22 11230.0 23 12484.0 24 14961.0 25 17815.0 26 21564.0 27 26160.0 28 31415.0 29 38368.0 30 46164.0 31 57592.0 32 73185.0 33 96525.0 34 138830.0 35 207147.0 36 365661.0 37 727556.0 38 822194.0 39 113180.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.521930622769545 19.898645761784273 13.77685107815261 25.80257253729357 2 14.859188070025745 20.835410841907976 38.320580605975735 25.984820482090548 3 17.801427887015777 24.69105927512636 29.22452401323471 28.28298882462315 4 12.999338210772052 16.879338106553277 35.72860649074537 34.3927171919293 5 14.038904751278992 37.46837339831032 34.48375385407216 14.008967996338528 6 33.397056883853246 35.93786790987297 16.898378306201973 13.766696900071812 7 28.86079148358555 31.873830028645976 20.943936470799727 18.321442016968735 8 26.37066593975704 35.826939492264046 19.487398441899177 18.314996126079738 9 26.28781959990191 15.997117172979717 19.31888163767502 38.39618158944336 10-11 25.485870893646457 25.684629961601065 27.82375935320011 21.005739791552365 12-13 25.986094829827998 22.84447798130942 27.832860486334116 23.33656670252846 14-15 23.08731632344986 24.571091622587335 24.92145188380318 27.42014017015963 16-17 23.382799899367956 27.74464537381629 25.708198010644523 23.164356716171227 18-19 23.424197111593212 27.16100886948108 26.93893395901205 22.475860059913654 20-21 23.851309861170886 26.27040192980236 26.93801337111781 22.940274837908945 22-23 23.670816901903837 26.028621870266583 26.71573759952895 23.58482362830063 24-25 23.521137700495792 26.249155483660957 26.683459562302385 23.546247253540862 26-27 23.36732138280164 26.486154820189995 26.667412475724568 23.479111321283792 28-29 23.496784025276387 26.621434414129475 26.53077775014815 23.351003810445984 30-31 23.772136429032326 26.406424006444073 26.36346136244674 23.457978202076866 32-33 23.587651706771926 26.389751371979198 26.340583728555522 23.68201319269335 34-35 23.790050325203545 26.43499788778108 26.447163096196995 23.327788690818377 36-37 23.75683626476231 26.348958321459868 26.527491774336582 23.36671363944124 38-39 23.724989142971314 26.465210367448748 26.407127095870614 23.40267339370932 40-41 23.867350305315245 26.309220881875618 26.413489563198418 23.409939249610723 42-43 23.642716847828833 26.24450158298064 26.342569680542603 23.77021188864793 44-45 23.63943409669211 26.32647328244275 26.394625954198474 23.639466666666667 46-47 23.72855437808979 26.316416877924905 26.22653950622652 23.728489237758787 48-49 23.575961400817956 26.42028479713428 26.29246010180702 23.71129370024075 50-51 23.670359716096318 26.402782041146004 26.35287009949005 23.573988143267627 52-53 23.844673524745982 26.26341824676384 26.251270542403145 23.640637686087036 54-55 23.42278366738662 26.186816250283336 26.52862597408688 23.861774108243168 56-57 23.50070226720351 26.29571759494856 26.30263848912809 23.90094164871984 58-59 23.545716024963106 26.239858046028864 26.435604963829164 23.77882096517887 60-61 23.625161749029346 26.262049549512874 26.465870425551802 23.646918275905982 62-63 23.585593690716923 26.27013996018262 26.41557894160812 23.728687407492338 64-65 23.347998102615158 26.125806649187094 26.43672169430211 24.089473553895633 66-67 23.37082403803315 26.33745217960027 26.284282655316016 24.007441127050566 68-69 23.403611764401198 26.189290646683077 26.36544686426459 24.041650724651138 70-71 23.327486127003407 26.01962289428894 26.409389588149896 24.24350139055776 72-73 23.378545769345724 26.203890034017235 26.22690480630862 24.19065939032842 74-75 23.278233751291406 26.28498776225399 26.249057147105898 24.1877213393487 76-77 23.286559525816784 25.959912035709337 26.4005496054322 24.35297883304168 78-79 23.20504278279902 26.03359106810589 26.411630312164274 24.349735836930815 80-81 23.33894830893325 26.151981026281117 26.185071311928 24.323999352857633 82-83 23.327707244917587 26.11839476834039 26.281721260571718 24.2721767261703 84-85 23.27403110251849 26.138351818347815 26.23826846759884 24.34934861153485 86-87 23.101239211493834 26.18640974159735 26.238673698208654 24.473677348700164 88-89 22.99723853872756 26.03740919618522 26.303400251231913 24.661952013855306 90-91 23.02419026815675 25.937914814109376 26.34765273408543 24.690242183648447 92-93 23.00753092403501 25.834270795573495 26.41918206589253 24.739016214498964 94-95 22.963165008386394 25.790291325375758 26.411812600758843 24.834731065479 96-97 22.848004101249934 25.662972165273988 26.49480088727963 24.99422284619645 98-99 22.665494454818088 25.63802525835368 26.445079763436404 25.25140052339183 100-101 22.622497438572974 25.641398913681375 26.475352656230765 25.260750991514886 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 45.5 2 60.5 3 73.5 4 68.5 5 71.0 6 135.0 7 323.0 8 471.5 9 475.5 10 421.5 11 350.5 12 343.5 13 389.0 14 421.0 15 463.5 16 527.0 17 577.5 18 639.0 19 758.0 20 887.0 21 1002.0 22 1204.5 23 1532.0 24 1974.5 25 2541.0 26 3434.0 27 4888.5 28 6999.5 29 10146.5 30 14443.0 31 19993.0 32 27861.0 33 35042.5 34 41050.0 35 48477.0 36 57659.0 37 67346.5 38 76714.0 39 85189.5 40 92602.5 41 99647.0 42 105905.0 43 112056.5 44 118508.5 45 125019.0 46 128914.0 47 131811.0 48 135661.0 49 136968.5 50 135212.5 51 133145.0 52 130450.0 53 126751.0 54 122750.5 55 115616.5 56 105414.0 57 94069.0 58 83267.5 59 71819.0 60 58914.5 61 47984.5 62 38776.0 63 29271.0 64 20675.5 65 14666.0 66 10793.5 67 8140.0 68 6092.0 69 4486.0 70 3228.0 71 2339.0 72 1575.5 73 1017.0 74 706.0 75 490.0 76 336.5 77 211.5 78 117.0 79 63.5 80 33.0 81 21.0 82 16.5 83 8.5 84 5.5 85 4.5 86 5.5 87 4.0 88 1.5 89 2.0 90 1.0 91 1.5 92 1.5 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14717007800111837 2 3.908034821892941E-4 3 0.006057453973934059 4 0.004331405260931343 5 0.025793029824493413 6 0.0013678121876625295 7 2.931026116419706E-4 8 0.0020842852383429022 9 0.0 10-11 0.09978515578566644 12-13 4.070869606138481E-4 14-15 0.006057453973934059 16-17 1.465513058209853E-4 18-19 3.7452000376474024E-4 20-21 7.653234859540343E-4 22-23 2.605356547928628E-4 24-25 0.001709765234578162 26-27 0.0034520974260054313 28-29 0.007213580942077388 30-31 0.01589267494236463 32-33 0.015908958420789182 34-35 0.011919506206773471 36-37 7.816069643785882E-4 38-39 1.7911826267009314E-4 40-41 0.0053409809232536866 42-43 0.009167598353023857 44-45 0.009265299223571182 46-47 0.009851504446855123 48-49 0.012261459253689103 50-51 0.006171438322905937 52-53 0.001888883497248255 54-55 9.444417486241275E-4 56-57 0.006008603538660397 58-59 0.009965488795827 60-61 0.008272007039673393 62-63 0.018921401929331658 64-65 0.036116755145660595 66-67 0.038087056035031625 68-69 0.028610071591941243 70-71 0.043151217825067895 72-73 0.02701429070633496 74-75 0.02577674634606886 76-77 0.2380156041317047 78-79 0.06944903548072248 80-81 0.056031449258890045 82-83 0.021901278481025025 84-85 0.0338207846877985 86-87 0.08197103038920445 88-89 0.26340154699558427 90-91 0.3171370257966122 92-93 0.051602343127411375 94-95 0.004787342656818854 96-97 0.01020974097219531 98-99 0.0015794974071817304 100-101 0.0014003791445116372 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3070597.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.748907036706754 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27769711679731 48.953111493493125 2 11.564086214106911 14.281393691986995 3 3.7093047052399344 6.8713653424403915 4 1.7324546897513087 4.279087343310408 5 0.9945174722640813 3.070518347060767 6 0.5860622674349749 2.1713222681738302 7 0.42549290959485564 1.8391605483545428 8 0.29452725588075984 1.4549388914525905 9 0.21820843200195061 1.21267189640826 >10 1.1394980698983583 12.178781732377885 >50 0.04395700217203582 1.817244342034902 >100 0.01297760751723557 1.279314291363739 >500 0.0010576150786881444 0.4687705964186945 >1k 1.5864226157231775E-4 0.12231921512386561 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.256695684910785E-5 0.0 3 0.0 0.0 0.0 3.256695684910785E-5 0.0 4 0.0 0.0 0.0 3.256695684910785E-5 0.0 5 0.0 0.0 0.0 3.256695684910785E-5 0.0 6 0.0 0.0 0.0 3.256695684910785E-5 1.302678273964314E-4 7 0.0 0.0 0.0 3.256695684910785E-5 1.302678273964314E-4 8 0.0 0.0 0.0 3.256695684910785E-5 1.302678273964314E-4 9 0.0 0.0 0.0 1.302678273964314E-4 1.9540174109464707E-4 10-11 0.0 0.0 0.0 1.6283478424553922E-4 1.9540174109464707E-4 12-13 0.0 0.0 0.0 1.6283478424553922E-4 2.442521763683089E-4 14-15 0.0 0.0 0.0 1.6283478424553922E-4 2.768191332174167E-4 16-17 0.0 0.0 0.0 1.6283478424553922E-4 2.931026116419706E-4 18-19 0.0 0.0 0.0 1.6283478424553922E-4 3.582365253401863E-4 20-21 0.0 0.0 0.0 2.442521763683089E-4 3.9080348218929414E-4 22-23 0.0 0.0 0.0 3.093860900665245E-4 4.885043527366176E-4 24-25 0.0 0.0 0.0 4.5593739588750985E-4 5.536382664348334E-4 26-27 0.0 0.0 0.0 8.630243565013579E-4 6.187721801330491E-4 28-29 0.0 0.0 0.0 0.002654206983202289 6.676226154067108E-4 30-31 0.0 0.0 0.0 0.010209740972195309 6.839060938312648E-4 32-33 0.0 0.0 0.0 0.027633062886468003 8.141739212276961E-4 34-35 1.6283478424553924E-5 0.0 0.0 0.05093472051200467 9.118747917750197E-4 36-37 3.256695684910785E-5 0.0 0.0 0.08723059392033536 9.118747917750197E-4 38-39 3.256695684910785E-5 0.0 0.0 0.14728406235009023 9.281582701995735E-4 40-41 3.256695684910785E-5 0.0 0.0 0.21728673609724752 9.444417486241275E-4 42-43 3.256695684910785E-5 3.256695684910785E-5 0.0 0.28916200986322854 9.444417486241275E-4 44-45 3.256695684910785E-5 3.256695684910785E-5 0.0 0.3745362872431648 9.444417486241275E-4 46-47 3.256695684910785E-5 3.256695684910785E-5 0.0 0.47264424475110217 9.770087054732353E-4 48-49 3.256695684910785E-5 3.256695684910785E-5 0.0 0.5799035171336389 0.0011072765328696667 50-51 3.256695684910785E-5 3.256695684910785E-5 0.0 0.6915756121692296 0.0011398434897187746 52-53 3.256695684910785E-5 3.256695684910785E-5 0.0 0.8108032411938134 0.0012049774034169902 54-55 3.256695684910785E-5 3.256695684910785E-5 0.0 0.9460375295097339 0.001270111317115206 56-57 3.256695684910785E-5 3.256695684910785E-5 0.0 1.1029776945655845 0.0012863947955397599 58-59 3.256695684910785E-5 3.256695684910785E-5 0.0 1.2700787501583568 0.0013026782739643137 60-61 3.256695684910785E-5 3.256695684910785E-5 0.0 1.4439862997325927 0.0013026782739643137 62-63 3.256695684910785E-5 3.256695684910785E-5 0.0 1.6285269607180624 0.0014003791445116372 64-65 3.256695684910785E-5 3.256695684910785E-5 0.0 1.8329497488599122 0.0014003791445116372 66-67 3.256695684910785E-5 3.256695684910785E-5 0.0 2.0673341373029412 0.0014003791445116372 68-69 3.256695684910785E-5 3.256695684910785E-5 0.0 2.324841065108837 0.0014003791445116372 70-71 6.51339136982157E-5 4.885043527366177E-5 0.0 2.6000807009190723 0.001481796536634407 72-73 6.51339136982157E-5 6.51339136982157E-5 0.0 2.882012846361799 0.0016609147993045 74-75 6.51339136982157E-5 8.141739212276961E-5 0.0 3.183224630259197 0.0016609147993045 76-77 6.51339136982157E-5 9.770087054732354E-5 0.0 3.5272782458915968 0.0016609147993045 78-79 6.51339136982157E-5 9.770087054732354E-5 0.0 3.911340368013126 0.0016609147993045 80-81 6.51339136982157E-5 9.770087054732354E-5 0.0 4.307387130255126 0.0017260487130027159 82-83 6.51339136982157E-5 9.770087054732354E-5 0.0 4.7273217553459475 0.0018237495835500394 84-85 6.51339136982157E-5 9.770087054732354E-5 0.0 5.160152895349015 0.0018237495835500394 86-87 6.51339136982157E-5 9.770087054732354E-5 0.0 5.633660164456619 0.001888883497248255 88-89 6.51339136982157E-5 9.770087054732354E-5 0.0 6.152077267059142 0.0019540174109464706 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2265 0.0 49.098103 1 GTATCAA 4215 0.0 40.703026 1 TCAACGC 5005 0.0 33.09142 4 CAACGCA 5215 0.0 31.99769 5 ATCAACG 5230 0.0 31.667791 3 TATCAAC 5375 0.0 30.990082 2 AACGCAG 5575 0.0 29.928543 6 GTACATG 7840 0.0 26.12632 1 TACATGG 8070 0.0 24.228008 2 ACATGGG 8170 0.0 23.524858 3 ACGCAGA 6955 0.0 23.443 7 CGCAGAG 7185 0.0 22.626406 8 CATGGGG 6800 0.0 21.56471 4 GTATAGG 790 0.0 19.851984 1 GCAGAGT 8480 0.0 18.162071 9 ATGGGGG 4140 0.0 17.684235 5 AGAGTAC 7005 0.0 17.439789 10-11 GTATTAA 1675 0.0 17.30741 1 CAGAGTA 7890 0.0 15.51374 10-11 ATTATAC 1015 0.0 15.429148 3 >>END_MODULE