##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921397_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1687031 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.166969664457856 31.0 31.0 34.0 26.0 34.0 2 30.228742684633538 31.0 31.0 34.0 26.0 34.0 3 30.281249722145 33.0 31.0 34.0 26.0 34.0 4 33.72891013858074 37.0 35.0 37.0 28.0 37.0 5 33.71980420039703 37.0 35.0 37.0 28.0 37.0 6 33.760108142648235 37.0 35.0 37.0 29.0 37.0 7 33.67461712321825 37.0 35.0 37.0 28.0 37.0 8 33.63739966841155 37.0 35.0 37.0 28.0 37.0 9 35.170773981035325 39.0 35.0 39.0 28.0 39.0 10-11 35.06491759783904 39.0 35.0 39.0 28.0 39.0 12-13 34.94657626326961 39.0 35.0 39.0 27.0 39.0 14-15 36.05736142370828 40.0 36.0 41.0 27.0 41.0 16-17 36.01257564324544 40.0 36.0 41.0 27.0 41.0 18-19 35.96728098061031 40.0 36.0 41.0 27.0 41.0 20-21 35.91182971741479 40.0 36.0 41.0 27.0 41.0 22-23 35.79424740861312 40.0 36.0 41.0 27.0 41.0 24-25 35.699280866800905 40.0 36.0 41.0 26.5 41.0 26-27 35.551533729967026 40.0 36.0 41.0 25.5 41.0 28-29 35.407375738797924 40.0 36.0 41.0 25.0 41.0 30-31 35.256656516685226 39.5 35.0 41.0 24.5 41.0 32-33 35.06972841637172 39.0 35.0 41.0 24.0 41.0 34-35 34.905988390254834 39.0 35.0 41.0 24.0 41.0 36-37 34.73094033245388 39.0 35.0 41.0 23.0 41.0 38-39 34.94073375059498 39.0 35.0 41.0 23.5 41.0 40-41 35.048657078619186 40.0 35.0 41.0 23.0 41.0 42-43 34.87542107999201 40.0 35.0 41.0 21.5 41.0 44-45 34.74172525578961 40.0 35.0 41.0 20.5 41.0 46-47 34.57110835544812 39.5 35.0 41.0 18.5 41.0 48-49 34.41363377436455 39.0 35.0 41.0 15.0 41.0 50-51 32.72466510692453 37.0 32.0 39.5 12.5 40.0 52-53 32.8726484575565 37.5 32.5 39.5 11.0 40.0 54-55 33.724983417613544 39.0 34.0 40.5 10.0 41.0 56-57 33.74356369266481 39.0 34.0 41.0 8.0 41.0 58-59 33.57643783664912 38.0 34.0 41.0 7.5 41.0 60-61 33.3421202692778 38.0 33.5 40.0 6.0 41.0 62-63 33.06738435748957 37.0 33.0 40.0 2.0 41.0 64-65 32.7866414428662 37.0 33.0 40.0 2.0 41.0 66-67 32.44997335555779 36.0 33.0 39.5 2.0 41.0 68-69 32.09517608153021 36.0 32.0 39.0 2.0 41.0 70-71 31.72078847395217 35.0 32.0 39.0 2.0 41.0 72-73 31.37153525928095 35.0 32.0 37.5 2.0 40.0 74-75 30.980290818603805 35.0 31.5 37.0 2.0 39.5 76-77 30.6079846784084 35.0 31.0 37.0 2.0 39.0 78-79 30.26488132109013 35.0 31.0 36.0 2.0 39.0 80-81 29.91819118913642 35.0 31.0 36.0 2.0 37.0 82-83 29.61902270912627 35.0 31.0 35.0 2.0 37.0 84-85 29.37849778694049 35.0 30.5 35.0 2.0 36.5 86-87 29.15520639514034 35.0 30.0 35.0 2.0 36.0 88-89 28.956711820944605 35.0 30.0 35.0 2.0 36.0 90-91 28.709866623672003 34.0 30.0 35.0 2.0 36.0 92-93 28.527991779641276 34.0 30.0 35.0 2.0 35.0 94-95 28.321344124678205 34.0 29.5 35.0 2.0 35.0 96-97 28.080428279029846 34.0 29.0 35.0 2.0 35.0 98-99 27.863467831948554 34.0 29.0 35.0 2.0 35.0 100-101 26.841387917590133 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 66545.0 3 11021.0 4 7150.0 5 5529.0 6 4931.0 7 5006.0 8 5332.0 9 5588.0 10 6189.0 11 6619.0 12 6981.0 13 7065.0 14 7580.0 15 8414.0 16 8665.0 17 9745.0 18 8539.0 19 7554.0 20 7423.0 21 7862.0 22 8226.0 23 9276.0 24 10818.0 25 13013.0 26 15145.0 27 18065.0 28 21361.0 29 25143.0 30 29868.0 31 36062.0 32 44939.0 33 57975.0 34 80533.0 35 116602.0 36 192436.0 37 346957.0 38 381394.0 39 75464.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.56459189682709 18.849303662303942 13.175410202594149 24.41069423827482 2 15.637992614708661 19.501510627773488 39.16624259958459 25.694254157933255 3 19.13518123262739 23.92997758870077 29.369180341868685 27.56566083680316 4 13.33515212620841 15.553585196607555 36.720953680090155 34.39030899709389 5 14.131896115633715 37.33899648978396 34.35967171562921 14.169435678953116 6 33.55097273727053 35.40283447014498 17.013164486419026 14.033028306165463 7 28.9844461412961 31.844266960084987 20.88815165427227 18.28313524434664 8 26.68852801135478 34.747976956063674 19.8702666937809 18.693228338800647 9 26.758337172206204 15.56388744128303 19.40673258263359 38.27104280387717 10-11 25.580914831174223 25.322058518364805 27.87664897874485 21.220377671716122 12-13 26.11355560470236 22.71802850422488 27.818300834184672 23.350115056888086 14-15 23.210852024080157 24.39727697194631 25.05911665558214 27.33275434839139 16-17 23.363194545943447 27.5877699968189 25.83970763543607 23.20932782180158 18-19 23.3423720432613 26.81944428386826 27.327912478963285 22.510271193907155 20-21 23.699006923490597 26.031364117973858 27.444136852334637 22.825492106200905 22-23 23.546355179925936 25.78432846420325 27.14377677376618 23.525539582104635 24-25 23.361599082971672 26.043242772041904 27.211766000036175 23.383392144950253 26-27 23.182231082028178 26.317092376126432 27.148005535665792 23.352671006179595 28-29 23.25760843304742 26.540325102752565 27.00377512861672 23.198291335583292 30-31 23.59112763144634 26.205826382343 26.96432911827651 23.238716867934148 32-33 23.270031244470122 26.204094771434594 26.911622996238272 23.614250987857012 34-35 23.59361193882974 26.35053002151031 26.949658997709065 23.106199041950884 36-37 23.603870295429232 26.183118820772695 26.92769366740901 23.285317216389064 38-39 23.390685850104912 26.378670068554484 26.9368219281863 23.29382215315431 40-41 23.610884290027613 26.186369770300306 26.953013506219904 23.249732433452174 42-43 23.329024178399013 26.22475253053935 26.78676455735909 23.659458733702543 44-45 23.380491326518644 26.3308677817133 26.85885239149202 23.429788500276032 46-47 23.482410229102264 26.368247562664475 26.60105925011412 23.54828295811914 48-49 23.339519531666475 26.505350333944826 26.54140431750908 23.61372581687962 50-51 23.441680896874303 26.53355111738065 26.648362907417035 23.376405078328013 52-53 23.633061636034515 26.361637073984923 26.59747765513698 23.407823634843584 54-55 23.209467064790566 26.265099672539726 26.962222381936407 23.5632108807333 56-57 23.317189456601028 26.428860808219532 26.701938453276814 23.552011281902622 58-59 23.389396674573035 26.29820969162786 26.824390107713135 23.48800352608597 60-61 23.39228410426154 26.449670960007886 26.833065816315017 23.324979119415556 62-63 23.402864406981028 26.357058844495135 26.874933171757494 23.365143576766346 64-65 23.114484154799893 26.189964191772425 26.91085129487018 23.7847003585575 66-67 23.18982832083959 26.425113441533544 26.70555807829344 23.67950015933342 68-69 23.3556846064887 26.251727724310143 26.8589185024944 23.533669166706762 70-71 23.18064149457582 26.17529837889264 26.79022881505408 23.853831311477457 72-73 23.214570481595505 26.3353062634766 26.70173020162968 23.748393053298216 74-75 23.175081797410872 26.48834464846861 26.71367728731337 23.622896266807146 76-77 23.222589359396608 26.194143602800533 26.74725471173397 23.836012326068886 78-79 23.176204309315466 26.209626157675558 26.792726322230344 23.821443210778632 80-81 23.349269305855415 26.366420032390796 26.544652606889045 23.73965805486474 82-83 23.332577836699254 26.321255189831156 26.71306386362563 23.63310310984396 84-85 23.33756111470852 26.40309865681306 26.600952884495427 23.658387343982987 86-87 23.162296292225125 26.501893176987167 26.63281873183137 23.702991798956337 88-89 23.082437382466793 26.321882789127976 26.741957237965934 23.853722590439297 90-91 23.221705799432875 26.17898134490754 26.804481737794873 23.79483111786471 92-93 23.307538894423036 26.09930388586236 26.896102194582188 23.69705502513242 94-95 23.284474521157495 25.974769551844297 26.931236362080526 23.809519564917686 96-97 23.203111722262566 25.889976099329807 26.958494127043174 23.948418051364452 98-99 23.017632466317085 25.844858063845273 26.902924880048722 24.234584589788916 100-101 23.215571829941382 25.863408065566603 27.030148418595584 23.890871685896432 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 49.0 1 40.0 2 49.5 3 86.5 4 105.0 5 125.0 6 184.5 7 315.5 8 482.5 9 550.0 10 514.0 11 473.5 12 472.0 13 511.5 14 616.5 15 709.0 16 794.0 17 880.0 18 985.5 19 1115.5 20 1242.5 21 1412.0 22 1633.0 23 1934.0 24 2347.5 25 2904.0 26 3746.0 27 4967.0 28 6546.0 29 8603.0 30 11312.5 31 14737.5 32 19235.0 33 22828.5 34 25607.5 35 29268.0 36 34048.0 37 38620.5 38 42013.0 39 45900.0 40 49511.5 41 51924.5 42 54379.5 43 57632.5 44 61240.5 45 65116.5 46 67203.5 47 68361.0 48 70219.5 49 70987.0 50 70124.0 51 69476.0 52 68527.5 53 66799.5 54 64975.0 55 61752.5 56 56914.0 57 51056.0 58 45707.5 59 39609.5 60 32625.0 61 27134.0 62 22446.0 63 17161.0 64 12220.0 65 8850.5 66 6646.5 67 5028.5 68 3822.5 69 2888.5 70 2216.5 71 1678.5 72 1194.0 73 893.0 74 705.0 75 541.0 76 407.0 77 279.0 78 171.0 79 128.0 80 109.5 81 84.0 82 61.0 83 48.0 84 38.5 85 30.0 86 25.5 87 21.0 88 21.5 89 20.0 90 16.0 91 13.5 92 12.0 93 7.5 94 5.5 95 6.5 96 5.5 97 4.0 98 5.0 99 2.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05050292496107066 2 0.057912391651368585 3 0.049080307356533466 4 0.05518570790933895 5 0.048013344153130556 6 0.01754561712262549 7 0.014641106180028701 8 0.020153749397610356 9 0.02003519793056559 10-11 0.02258405447202808 12-13 0.028096697689609734 14-15 0.04424933507445921 16-17 0.03002315902908719 18-19 0.02350282834162502 20-21 0.02691118301916207 22-23 0.047153846017056 24-25 0.04235251160174294 26-27 0.030408451296982688 28-29 0.019768457129714867 30-31 0.013099937108446733 32-33 0.010225064032611138 34-35 0.009810133897954454 36-37 0.0016597205386267354 38-39 0.007379828823536733 40-41 0.00400111201276088 42-43 0.22483285725040025 44-45 0.19943320543605894 46-47 0.2063684662581778 48-49 0.20417526411784964 50-51 0.20189314837723787 52-53 0.20619063905761068 54-55 0.20556824385562564 56-57 0.21499308548568463 58-59 0.21208857454308783 60-61 0.21629715162317706 62-63 0.21404467374932645 64-65 0.21451887961750551 66-67 0.2047680214530735 68-69 0.20497548652040182 70-71 0.188615384068224 72-73 0.197121451828686 74-75 0.19549136915682047 76-77 0.19457259528722354 78-79 0.219379489766341 80-81 0.22744098952538513 82-83 0.22592945832056438 84-85 0.22056500443678864 86-87 0.23790315649208582 88-89 0.23686583115544407 90-91 0.23582850581880238 92-93 0.23979997996480207 94-95 0.2503214226650251 96-97 0.25091418000024895 98-99 0.24042237516678708 100-101 0.2503214226650251 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1687031.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.96477016830833 #Duplication Level Percentage of deduplicated Percentage of total 1 82.18665862893238 55.03610705987671 2 10.421645722394413 13.957662211513512 3 3.0777457655011657 6.183016134698092 4 1.4118193428180357 3.7816863124392746 5 0.7702415450293926 2.5789524018487993 6 0.495536535960892 1.9910094144372477 7 0.3293596726844068 1.5438846348814395 8 0.23398841862165026 1.2535184540035782 9 0.18332006893670336 1.1048387655226302 >10 0.8525244421129227 9.689435974680345 >50 0.02703550773417908 1.2156157476483722 >100 0.009147607045227659 1.1524903489464213 >500 7.991527326269343E-4 0.3455884883925761 >1k 1.775894961393187E-4 0.1661940511110203 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.927573352238341E-5 0.0 5 0.0 0.0 0.0 5.927573352238341E-5 0.0 6 0.0 0.0 0.0 5.927573352238341E-5 0.0 7 0.0 0.0 0.0 5.927573352238341E-5 0.0 8 0.0 0.0 0.0 5.927573352238341E-5 0.0 9 0.0 0.0 0.0 1.1855146704476682E-4 0.0 10-11 0.0 0.0 0.0 1.1855146704476682E-4 5.927573352238341E-5 12-13 0.0 0.0 0.0 1.1855146704476682E-4 1.778272005671502E-4 14-15 0.0 0.0 0.0 1.4818933380595853E-4 1.778272005671502E-4 16-17 0.0 0.0 0.0 1.778272005671502E-4 2.3710293408953363E-4 18-19 0.0 0.0 0.0 1.778272005671502E-4 2.3710293408953363E-4 20-21 0.0 0.0 0.0 1.778272005671502E-4 2.3710293408953363E-4 22-23 0.0 0.0 0.0 2.9637866761191706E-4 3.556544011343004E-4 24-25 0.0 0.0 0.0 5.927573352238341E-4 4.7420586817906727E-4 26-27 0.0 0.0 0.0 9.780496031193261E-4 4.7420586817906727E-4 28-29 0.0 0.0 0.0 0.003111976009925129 4.7420586817906727E-4 30-31 0.0 0.0 0.0 0.010462166966700671 4.7420586817906727E-4 32-33 0.0 0.0 0.0 0.02439196434446077 4.7420586817906727E-4 34-35 0.0 0.0 0.0 0.04395295640684729 5.334816017014506E-4 36-37 0.0 0.0 0.0 0.07611004184274028 5.334816017014506E-4 38-39 0.0 0.0 0.0 0.12951747774640776 5.334816017014506E-4 40-41 0.0 0.0 0.0 0.18879321126879114 5.334816017014506E-4 42-43 0.0 0.0 0.0 0.24993613039712964 5.334816017014506E-4 44-45 0.0 0.0 0.0 0.32788371997906385 5.334816017014506E-4 46-47 0.0 0.0 0.0 0.41679732026263894 5.334816017014506E-4 48-49 0.0 0.0 0.0 0.5079633984200645 6.520330687462175E-4 50-51 0.0 0.0 0.0 0.6080208366058477 7.113088022686009E-4 52-53 0.0 0.0 0.0 0.7098269089305413 7.705845357909842E-4 54-55 0.0 0.0 0.0 0.8253256756989054 8.594981360745594E-4 56-57 0.0 0.0 0.0 0.9562954089166115 8.891360028357511E-4 58-59 0.0 0.0 0.0 1.099713046174018 8.891360028357511E-4 60-61 0.0 0.0 0.0 1.2524369735944392 9.484117363581345E-4 62-63 0.0 0.0 0.0 1.4097251324960833 0.001007687469880518 64-65 0.0 0.0 0.0 1.5865742834601142 0.001007687469880518 66-67 0.0 0.0 0.0 1.7897418601080834 0.0010373253366417097 68-69 0.0 0.0 0.0 2.0133299269545137 0.0010669632034029013 70-71 0.0 0.0 0.0 2.2444756498250475 0.0011855146704476682 72-73 0.0 0.0 0.0 2.4841867161895665 0.001304066137492435 74-75 0.0 0.0 0.0 2.736612427394636 0.0013633418710148183 76-77 0.0 0.0 0.0 3.0195058656302107 0.0014226176045372017 78-79 0.0 0.0 0.0 3.328806643150007 0.0014226176045372017 80-81 0.0 0.0 0.0 3.6518001151134745 0.0014522554712983935 82-83 0.0 0.0 0.0 3.9931097887353584 0.001481893338059585 84-85 0.0 0.0 0.0 4.3607378880411805 0.001481893338059585 86-87 0.0 0.0 0.0 4.7585966114434175 0.0015708069383431602 88-89 0.0 2.9637866761191704E-5 0.0 5.177261117312011 0.001600444805104352 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1535 0.0 56.273132 1 GTATCAA 2795 0.0 44.489502 1 TCAACGC 3520 0.0 34.377254 4 ATCAACG 3655 0.0 33.108486 3 TATCAAC 3705 0.0 32.921753 2 CAACGCA 3740 0.0 32.35314 5 AACGCAG 3890 0.0 31.338406 6 GTACATG 4385 0.0 27.383503 1 ACGCAGA 4580 0.0 26.10469 7 TACATGG 4625 0.0 25.859901 2 CGCAGAG 4705 0.0 25.110876 8 ACATGGG 4810 0.0 25.05966 3 CATGGGG 3935 0.0 22.43065 4 GCAGAGT 5470 0.0 20.55811 9 GAGTACT 2805 0.0 19.36902 12-13 GTATTAG 470 0.0 19.186415 1 TAAGGTG 745 0.0 19.107897 5 TATACCG 150 7.7765854E-4 18.980513 5 GAGTACA 3340 0.0 18.899193 1 CAGAGTA 4860 0.0 18.842981 10-11 >>END_MODULE