##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921396_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1421380 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.362390775162165 33.0 31.0 34.0 29.0 34.0 2 31.49365124034389 34.0 31.0 34.0 28.0 34.0 3 31.567823523617893 34.0 31.0 34.0 28.0 34.0 4 35.05289999859291 37.0 35.0 37.0 32.0 37.0 5 34.79469388903741 37.0 35.0 37.0 32.0 37.0 6 34.756115183835426 37.0 35.0 37.0 32.0 37.0 7 34.62580027860248 37.0 35.0 37.0 32.0 37.0 8 34.58090095540953 37.0 35.0 37.0 32.0 37.0 9 36.20308854774937 39.0 37.0 39.0 32.0 39.0 10-11 36.05219716050598 39.0 37.0 39.0 32.0 39.0 12-13 35.98447529865342 39.0 37.0 39.0 31.0 39.0 14-15 37.23087668322334 40.0 38.0 41.0 31.0 41.0 16-17 37.215501132702016 40.0 38.0 41.0 31.0 41.0 18-19 37.1805453151163 40.0 38.0 41.0 31.0 41.0 20-21 37.14407829011243 40.0 38.0 41.0 31.0 41.0 22-23 37.03679487540278 40.0 38.0 41.0 31.0 41.0 24-25 36.977507422364184 40.0 37.5 41.0 30.5 41.0 26-27 36.836977444455385 40.0 37.0 41.0 30.0 41.0 28-29 36.68616203970789 40.0 37.0 41.0 30.0 41.0 30-31 36.54599719990432 40.0 37.0 41.0 30.0 41.0 32-33 36.49021619834245 40.0 37.0 41.0 30.0 41.0 34-35 36.616367544217596 40.0 37.0 41.0 30.0 41.0 36-37 36.59305885829264 40.0 37.0 41.0 30.0 41.0 38-39 36.50011151134812 40.0 37.0 41.0 30.0 41.0 40-41 36.374324248265765 40.0 37.0 41.0 29.5 41.0 42-43 36.26310733231085 40.0 36.5 41.0 29.0 41.0 44-45 36.1205680395109 40.0 36.0 41.0 28.5 41.0 46-47 35.9524511390339 40.0 36.0 41.0 28.0 41.0 48-49 35.78696970549747 40.0 35.5 41.0 27.0 41.0 50-51 35.63553201817952 40.0 35.0 41.0 27.0 41.0 52-53 35.46448627390283 39.0 35.0 41.0 26.5 41.0 54-55 35.25814841914196 39.0 35.0 41.0 26.0 41.0 56-57 34.998455374354506 39.0 35.0 41.0 26.0 41.0 58-59 34.775871688077785 38.5 35.0 40.5 25.5 41.0 60-61 34.503401272003266 38.0 34.5 40.0 24.5 41.0 62-63 34.209632188436586 37.5 34.0 40.0 24.0 41.0 64-65 33.89551562565957 37.0 34.0 40.0 23.0 41.0 66-67 33.56464034951948 36.5 34.0 39.5 22.5 41.0 68-69 33.207579605735276 36.0 34.0 39.0 22.0 41.0 70-71 32.82911431144381 35.5 33.0 39.0 21.5 40.0 72-73 32.43292961769548 35.0 33.0 37.5 20.0 40.0 74-75 32.028178601077826 35.0 33.0 37.0 19.0 39.0 76-77 29.2902541895904 33.0 29.0 34.5 11.5 36.5 78-79 30.932665437813956 34.5 31.5 36.0 14.5 38.0 80-81 31.130880552702305 35.0 32.0 36.0 17.0 37.0 82-83 30.96515393490833 35.0 32.0 35.0 14.0 37.0 84-85 30.726324768886574 35.0 32.0 35.0 9.5 36.5 86-87 30.480919599262688 35.0 32.0 35.0 7.0 36.0 88-89 30.202014239682562 35.0 32.0 35.0 2.0 36.0 90-91 30.013760922483783 34.5 31.0 35.0 2.0 35.5 92-93 29.87186290787826 34.0 31.0 35.0 2.0 35.0 94-95 29.775586753718216 34.0 31.0 35.0 2.0 35.0 96-97 29.58529809058802 34.0 31.0 35.0 2.0 35.0 98-99 29.322356794101506 34.0 31.0 35.0 2.0 35.0 100-101 28.24682597194276 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 28316.0 3 9364.0 4 4999.0 5 3434.0 6 3048.0 7 2984.0 8 3168.0 9 3362.0 10 3694.0 11 4123.0 12 4349.0 13 4793.0 14 5276.0 15 5793.0 16 6683.0 17 7319.0 18 6613.0 19 5637.0 20 5355.0 21 5159.0 22 5489.0 23 6095.0 24 7127.0 25 8585.0 26 10435.0 27 12341.0 28 14761.0 29 17491.0 30 21626.0 31 26634.0 32 34267.0 33 45121.0 34 65007.0 35 97415.0 36 171109.0 37 338527.0 38 364796.0 39 51082.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.98510581781313 20.241474720615184 13.443022830606244 25.330396630965442 2 15.58075348484454 21.129277478262154 37.23354034033386 26.056428696559443 3 18.34485932057067 24.37350530964672 28.823927147411382 28.457708222371224 4 13.076435989080574 16.506135141980693 35.27122674696761 35.14620212197113 5 14.076046146494642 37.60483281290796 34.18930816149444 14.129812879102968 6 34.216430590117504 35.69902368223133 16.192508447889033 13.892037279762143 7 29.49323896494956 31.712490678073422 20.36070579296177 18.433564564015253 8 27.132246528483776 35.510742229410994 19.017021105946235 18.339990136159 9 26.573892977247464 15.746316959574497 18.903178601077826 38.77661146210021 10-11 25.905117986299548 25.625918604348175 27.366046622669906 21.10291678668238 12-13 26.259859706615796 22.703558552489714 27.71914729257548 23.31743444831901 14-15 23.16222099643427 24.518190286693663 24.636074657991088 27.683514058880977 16-17 23.547395555580568 27.859865567076458 25.54411986114883 23.048619016194145 18-19 23.563177755053292 26.941070069851403 27.12912747484917 22.366624700246135 20-21 23.81321407753995 25.999519477856055 27.30716586562054 22.880100578983452 22-23 23.60266516483505 25.82072787943791 27.02575779588152 23.550849159845516 24-25 23.49684139874782 26.185821014706367 26.98238373610571 23.334953850440108 26-27 23.421298786457374 26.3780623069376 26.962055730019923 23.238583176585102 28-29 23.421547181732535 26.688881368286776 26.781051741351643 23.108519708629046 30-31 23.791098159209177 26.29377995581764 26.71945469725164 23.19566718772154 32-33 23.446492465635345 26.301142380669244 26.729561518623935 23.522803635071472 34-35 23.732187367521156 26.382731707145457 26.84613720278564 23.038943722547746 36-37 23.690594285794692 26.400831592055553 26.80734080499799 23.101233317151763 38-39 23.698593369591638 26.376316462468925 26.74198338159058 23.183106786348855 40-41 23.673392999177867 26.340801707164086 26.717427546313964 23.268377747344076 42-43 23.52548400022656 26.2536723718377 26.674251515122734 23.546592112813013 44-45 23.505545245864152 26.39561657329311 26.74016939165003 23.35866878919271 46-47 23.764792550725105 26.376211179119064 26.45353807487692 23.405458195278907 48-49 23.47942920127793 26.537686598276178 26.47541534398887 23.50746885645702 50-51 23.62048883005351 26.512963737558408 26.498188443398135 23.368358988989943 52-53 23.89408424068284 26.411644936243984 26.423746056582587 23.270524766490592 54-55 23.318504906185517 26.303373719280497 26.746573198092825 23.631548176441164 56-57 23.509262340699628 26.48623471726097 26.459639215840784 23.54486372619861 58-59 23.475049657236656 26.435803025942782 26.592074683921048 23.49707263289951 60-61 23.528304634801717 26.465820333800288 26.60010174006469 23.40577329133331 62-63 23.527166230039526 26.391419168388897 26.6453384335324 23.436076168039175 64-65 23.253438263278962 26.24192888303025 26.659344936199954 23.845287917490833 66-67 23.270209191533805 26.531740485103644 26.462239882999693 23.735810440362854 68-69 23.483453812547854 26.30401860108994 26.56295742692429 23.649570159437914 70-71 23.34712168945722 26.24302839880515 26.536356495519314 23.873493416218317 72-73 23.403055237411614 26.384964136234807 26.376097156760807 23.83588346959277 74-75 23.22172743662749 26.496718605079934 26.36480835893661 23.916745599355966 76-77 23.231648984655138 26.150088877276012 26.5931882029653 24.025073935103546 78-79 23.209793798828365 26.21642780354109 26.545910368070043 24.0278680295605 80-81 23.39649630134638 26.361754615793707 26.27309392718279 23.96865515567712 82-83 23.28878411779711 26.438203136682294 26.334937152005068 23.938075593515528 84-85 23.27084768736721 26.46851003544904 26.330359423835237 23.930282853348515 86-87 23.186941401213787 26.53210889019232 26.247568095097602 24.03338161349629 88-89 23.04220835448119 26.40638375393315 26.239517042378363 24.311890849207305 90-91 23.046758516378134 26.234407681582333 26.378566157800776 24.34026764423876 92-93 23.055055978094458 26.245332225855154 26.465865856705932 24.233745939344452 94-95 22.974360634076792 26.061089396018673 26.508634109154894 24.455915860749638 96-97 22.909117518339592 25.961482984600792 26.51986783390865 24.609531663150964 98-99 22.757127223261325 26.02810611078728 26.45618098396364 24.758585681987753 100-101 22.75032679922497 26.033304675374747 26.48635604441374 24.730012480986545 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 32.5 2 37.5 3 57.0 4 49.0 5 45.0 6 107.5 7 257.0 8 395.0 9 408.5 10 320.5 11 254.5 12 280.0 13 309.5 14 341.0 15 383.0 16 405.0 17 447.0 18 515.0 19 618.5 20 700.5 21 781.5 22 961.5 23 1209.5 24 1536.5 25 2017.0 26 2656.0 27 3572.5 28 4669.5 29 6203.0 30 8532.0 31 11442.0 32 15379.0 33 18191.5 34 20097.5 35 23134.5 36 27290.5 37 31401.5 38 34740.5 39 37994.0 40 40437.5 41 42740.0 42 45697.0 43 49281.0 44 52414.0 45 55922.5 46 58329.0 47 59632.0 48 61478.5 49 61790.0 50 61539.0 51 60699.5 52 59553.5 53 58464.5 54 57020.5 55 54007.5 56 48973.5 57 43848.0 58 39285.5 59 34314.5 60 28083.5 61 22420.0 62 18106.5 63 13589.0 64 9526.0 65 6847.5 66 5053.0 67 3890.0 68 2929.0 69 2210.5 70 1623.5 71 1137.5 72 790.0 73 584.5 74 446.0 75 322.5 76 237.0 77 145.0 78 78.0 79 50.0 80 31.0 81 17.0 82 11.0 83 7.0 84 6.0 85 5.5 86 3.5 87 2.0 88 0.5 89 0.0 90 0.0 91 0.0 92 0.5 93 1.5 94 1.5 95 0.5 96 0.5 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1478140961600698 2 7.73895791413978E-4 3 0.006965062122725802 4 0.004221249771348971 5 0.030041227539433505 6 0.0013367290942605074 7 0.0 8 0.001899562397107037 9 0.0 10-11 0.1003953903952497 12-13 1.0553124428372426E-4 14-15 0.005065499725618765 16-17 1.4070832571163236E-4 18-19 3.86947895706989E-4 20-21 6.683645471302537E-4 22-23 3.165937328511728E-4 24-25 0.001618145745683772 26-27 0.0032011144099396358 28-29 0.006965062122725802 30-31 0.015794509561130734 32-33 0.01582968664255864 34-35 0.011432551464070129 36-37 7.035416285581618E-4 38-39 3.165937328511728E-4 40-41 0.005311739295614121 42-43 0.00882944743840493 44-45 0.008266614135558402 46-47 0.009919936962670082 48-49 0.012558218069763188 50-51 0.006226343412739732 52-53 0.0016884999085395882 54-55 7.73895791413978E-4 56-57 0.006120812168456008 58-59 0.009638520311246816 60-61 0.007809312076995595 62-63 0.01822172817965639 64-65 0.03486048769505692 66-67 0.03721735215072676 68-69 0.027297415188056676 70-71 0.04333816431918276 72-73 0.026558696478070607 74-75 0.023779707045265868 76-77 0.2401539349083285 78-79 0.06831389213299752 80-81 0.05596673655180177 82-83 0.020578592635326232 84-85 0.03285539405366616 86-87 0.08421393293841196 88-89 0.26604426683926885 90-91 0.3191616597954101 92-93 0.051710309699024896 94-95 0.004889614318479224 96-97 0.009708874474102633 98-99 0.0011608436871209668 100-101 0.0012663749314046912 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1421380.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.56163611470409 #Duplication Level Percentage of deduplicated Percentage of total 1 81.68574401430169 53.55451024824516 2 10.530883258202339 13.808438722813824 3 3.2172691661929784 6.327882910710045 4 1.4500010556630856 3.8025776630928 5 0.8300041385973518 2.7208214654209 6 0.5365067448169978 2.110455598606585 7 0.3563088486349806 1.6352133755059044 8 0.2548486201863777 1.3366634000794984 9 0.1931432156239151 1.1396506698683058 >10 0.8954293515514048 9.855638519414782 >50 0.035753265697207604 1.5750433342201935 >100 0.013031382359988025 1.5968528243270976 >500 9.692443545330508E-4 0.44975912774407756 >1k 1.0769381717033898E-4 0.08649213995078414 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.035416285581618E-5 0.0 5 0.0 0.0 0.0 7.035416285581618E-5 0.0 6 0.0 0.0 0.0 7.035416285581618E-5 0.0 7 0.0 0.0 7.035416285581618E-5 7.035416285581618E-5 0.0 8 0.0 0.0 7.035416285581618E-5 7.035416285581618E-5 0.0 9 0.0 0.0 7.035416285581618E-5 7.035416285581618E-5 0.0 10-11 0.0 0.0 7.035416285581618E-5 7.035416285581618E-5 0.0 12-13 0.0 0.0 7.035416285581618E-5 7.035416285581618E-5 0.0 14-15 0.0 0.0 7.035416285581618E-5 7.035416285581618E-5 0.0 16-17 0.0 0.0 7.035416285581618E-5 1.4070832571163236E-4 0.0 18-19 0.0 0.0 7.035416285581618E-5 2.1106248856744855E-4 0.0 20-21 0.0 0.0 7.035416285581618E-5 3.165937328511728E-4 7.035416285581618E-5 22-23 0.0 0.0 7.035416285581618E-5 4.924791399907132E-4 7.035416285581618E-5 24-25 0.0 0.0 7.035416285581618E-5 8.090728728418861E-4 7.035416285581618E-5 26-27 0.0 0.0 7.035416285581618E-5 9.497811985535184E-4 7.035416285581618E-5 28-29 0.0 0.0 7.035416285581618E-5 0.0024623956999535665 7.035416285581618E-5 30-31 0.0 0.0 7.035416285581618E-5 0.00918121825268401 7.035416285581618E-5 32-33 0.0 0.0 7.035416285581618E-5 0.0217394363224472 7.035416285581618E-5 34-35 0.0 0.0 7.035416285581618E-5 0.0417551956549269 7.035416285581618E-5 36-37 0.0 0.0 7.035416285581618E-5 0.07446988138288144 7.035416285581618E-5 38-39 0.0 0.0 7.035416285581618E-5 0.1281852847232971 7.035416285581618E-5 40-41 0.0 0.0 7.035416285581618E-5 0.1856646357764989 7.035416285581618E-5 42-43 0.0 0.0 7.035416285581618E-5 0.24944068440529626 7.035416285581618E-5 44-45 0.0 0.0 7.035416285581618E-5 0.3221165346353544 1.0553124428372426E-4 46-47 0.0 0.0 7.035416285581618E-5 0.40833556121515713 2.814166514232647E-4 48-49 0.0 0.0 7.035416285581618E-5 0.5004643374748484 3.517708142790809E-4 50-51 0.0 0.0 7.035416285581618E-5 0.6017039778243679 3.517708142790809E-4 52-53 0.0 3.517708142790809E-5 7.035416285581618E-5 0.7049135347338502 4.5730205856280514E-4 54-55 0.0 7.035416285581618E-5 7.035416285581618E-5 0.817163601570305 5.628333028465294E-4 56-57 0.0 7.035416285581618E-5 7.035416285581618E-5 0.9492887194135277 5.628333028465294E-4 58-59 0.0 7.035416285581618E-5 7.035416285581618E-5 1.0893638576594578 5.628333028465294E-4 60-61 0.0 7.035416285581618E-5 7.035416285581618E-5 1.2411177869394532 5.628333028465294E-4 62-63 0.0 7.035416285581618E-5 7.035416285581618E-5 1.3994146533650396 5.628333028465294E-4 64-65 0.0 7.035416285581618E-5 7.035416285581618E-5 1.569179248336124 5.980103842744375E-4 66-67 0.0 7.035416285581618E-5 7.035416285581618E-5 1.7711308728137443 6.331874657023456E-4 68-69 0.0 7.035416285581618E-5 7.035416285581618E-5 1.9900026734581884 6.331874657023456E-4 70-71 0.0 7.035416285581618E-5 7.035416285581618E-5 2.222171410882382 6.331874657023456E-4 72-73 0.0 7.035416285581618E-5 7.035416285581618E-5 2.4691145225062963 6.331874657023456E-4 74-75 0.0 7.035416285581618E-5 7.035416285581618E-5 2.7257665086043144 6.331874657023456E-4 76-77 0.0 7.035416285581618E-5 7.035416285581618E-5 3.010489805681802 6.331874657023456E-4 78-79 0.0 7.035416285581618E-5 7.035416285581618E-5 3.3310937258157565 6.331874657023456E-4 80-81 0.0 7.035416285581618E-5 7.035416285581618E-5 3.6789950611377673 6.331874657023456E-4 82-83 0.0 7.035416285581618E-5 7.035416285581618E-5 4.033333802361086 7.035416285581618E-4 84-85 0.0 7.035416285581618E-5 7.035416285581618E-5 4.405999803008344 7.035416285581618E-4 86-87 0.0 7.035416285581618E-5 7.035416285581618E-5 4.808390437462185 7.035416285581618E-4 88-89 0.0 7.035416285581618E-5 7.035416285581618E-5 5.240822299455459 7.035416285581618E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1265 0.0 49.968807 1 GTATCAA 2210 0.0 41.29019 1 TCAACGC 2890 0.0 31.205261 4 CAACGCA 2915 0.0 30.500668 5 TATCAAC 2975 0.0 30.313684 2 ATCAACG 3020 0.0 29.861988 3 AACGCAG 3075 0.0 29.064157 6 GTACATG 3915 0.0 25.371868 1 TACATGG 4080 0.0 23.616087 2 ACATGGG 4080 0.0 23.03441 3 ACGCAGA 3900 0.0 22.306505 7 CGCAGAG 3935 0.0 21.98729 8 TATACTG 620 0.0 20.705149 5 CATGGGG 3545 0.0 20.485533 4 GTATTAC 260 1.4812031E-8 20.107462 1 GTGGTAT 695 0.0 19.831295 1 TACACTG 1465 0.0 19.796959 5 CTACACG 290 2.4629117E-9 19.640625 4 GAGTACA 2910 0.0 19.43533 1 CGTATAC 125 0.0060576787 18.985937 3 >>END_MODULE