##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921394_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1557055 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.540655917742146 31.0 31.0 34.0 27.0 34.0 2 30.70610864741451 33.0 31.0 34.0 27.0 34.0 3 30.752207853929374 33.0 31.0 34.0 27.0 34.0 4 34.244505171622066 37.0 35.0 37.0 31.0 37.0 5 33.91689503582083 37.0 35.0 37.0 30.0 37.0 6 33.85581177286608 37.0 35.0 37.0 30.0 37.0 7 33.69720594327111 37.0 35.0 37.0 29.0 37.0 8 33.644322133771766 37.0 35.0 37.0 28.0 37.0 9 35.16425367119337 39.0 35.0 39.0 28.0 39.0 10-11 34.98991300885325 39.0 35.0 39.0 27.5 39.0 12-13 34.900713526497135 39.0 35.0 39.0 27.0 39.0 14-15 36.0204841832819 40.0 36.0 41.0 27.0 41.0 16-17 35.96176050300086 40.0 36.0 41.0 27.0 41.0 18-19 35.91516709429018 40.0 36.0 41.0 27.0 41.0 20-21 35.86564347437952 40.0 36.0 41.0 27.0 41.0 22-23 35.74255212564746 40.0 36.0 41.0 27.0 41.0 24-25 35.65650410550687 40.0 36.0 41.0 26.0 41.0 26-27 35.491936379896664 40.0 36.0 41.0 25.0 41.0 28-29 35.32135313139227 40.0 36.0 41.0 25.0 41.0 30-31 35.1508097016483 39.0 35.0 41.0 24.0 41.0 32-33 35.089251503639886 39.0 35.0 41.0 24.0 41.0 34-35 35.22027417143261 39.5 35.0 41.0 24.0 41.0 36-37 35.17859870075239 40.0 35.0 41.0 24.0 41.0 38-39 35.07626255976828 40.0 35.0 41.0 23.5 41.0 40-41 34.9297574587924 40.0 35.0 41.0 22.5 41.0 42-43 34.79475869510068 39.5 35.0 41.0 21.5 41.0 44-45 34.62590981050766 39.0 35.0 41.0 19.5 41.0 46-47 34.43758730423781 39.0 35.0 41.0 17.5 41.0 48-49 34.25481116595111 39.0 34.5 41.0 15.0 41.0 50-51 34.085151776912184 39.0 34.0 41.0 14.0 41.0 52-53 33.897593855066134 39.0 34.0 41.0 12.5 41.0 54-55 33.68040371085158 38.0 34.0 40.0 9.0 41.0 56-57 33.41106287189598 38.0 33.5 40.0 8.0 41.0 58-59 33.17040470632058 38.0 33.0 40.0 6.5 41.0 60-61 32.889427476871404 37.0 33.0 40.0 2.0 41.0 62-63 32.59508238308859 37.0 33.0 40.0 2.0 41.0 64-65 32.28649020105263 36.0 32.5 39.0 2.0 41.0 66-67 31.965460757648252 36.0 32.0 39.0 2.0 41.0 68-69 31.612061552096748 35.0 32.0 39.0 2.0 40.0 70-71 31.239043257945287 35.0 31.5 38.0 2.0 40.0 72-73 30.86217057200934 35.0 31.0 37.0 2.0 39.5 74-75 30.466809778716872 35.0 31.0 36.5 2.0 39.0 76-77 27.83841258015934 32.0 27.0 34.5 2.0 36.0 78-79 29.43847905179971 34.0 29.5 35.0 2.0 37.0 80-81 29.651919810154425 35.0 30.5 35.0 2.0 37.0 82-83 29.505578158767676 35.0 31.0 35.0 2.0 37.0 84-85 29.285718230891007 34.0 30.0 35.0 2.0 36.0 86-87 29.04374476174573 34.0 30.0 35.0 2.0 36.0 88-89 28.768054757217953 34.0 30.0 35.0 2.0 35.5 90-91 28.57517203952333 34.0 30.0 35.0 2.0 35.0 92-93 28.422375574401677 34.0 29.0 35.0 2.0 35.0 94-95 28.315096126983313 34.0 29.0 35.0 2.0 35.0 96-97 28.110471049513343 34.0 29.0 35.0 2.0 35.0 98-99 27.811815896034503 34.0 29.0 35.0 2.0 35.0 100-101 26.725597682805038 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57393.0 3 15891.0 4 8177.0 5 5455.0 6 4793.0 7 4703.0 8 4621.0 9 4989.0 10 5567.0 11 5632.0 12 5944.0 13 6420.0 14 6946.0 15 7861.0 16 8516.0 17 9111.0 18 8259.0 19 7031.0 20 6613.0 21 6483.0 22 6828.0 23 7811.0 24 8947.0 25 10945.0 26 12913.0 27 15346.0 28 18493.0 29 22214.0 30 26775.0 31 32942.0 32 42278.0 33 55507.0 34 80603.0 35 120273.0 36 206838.0 37 360488.0 38 309082.0 39 28367.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.448142385000196 21.248505034657477 14.741322771054898 26.56202980928743 2 15.41701882788757 22.343890891248332 34.49839825516425 27.740692025699847 3 17.7964806272648 25.031952842100935 28.239119013578833 28.932447517055433 4 14.228323699421965 18.478998073217724 32.176043673731535 35.11663455362877 5 15.520751228718643 36.31572624964428 32.72448244784008 15.439040073796992 6 34.41354466581162 33.97649772870464 16.360134383102306 15.249823222381428 7 29.16263662018145 31.353633207326144 20.11002829702759 19.373701875464818 8 27.254335649918787 33.911612663315424 19.07133631721357 19.762715369552218 9 26.66951392211579 15.902007315091632 19.087058581745666 38.341420181046914 10-11 26.173310317764614 25.39931486795669 26.538566236340667 21.88880857793803 12-13 26.707639327974714 23.000543654701875 26.405947897135263 23.88586912018815 14-15 24.28472519715939 24.717644119515295 23.856623264518888 27.141007418806428 16-17 24.278268911502803 27.35882804396762 24.915818644813445 23.447084399716132 18-19 24.076372456052408 26.444145946173332 26.54863818102589 22.930843416748363 20-21 24.67781982315253 25.312899794996685 26.63023233708916 23.379048044761625 22-23 24.551299507017106 25.17642313808402 26.272789861867167 23.999487493031705 24-25 24.24911433834202 25.711997472107118 26.19288156667703 23.846006622873833 26-27 23.894989213376057 26.058608072723487 26.342547724147586 23.703854989752866 28-29 23.962629884018018 26.17057790600437 26.255936224683136 23.610855985294478 30-31 24.477614049421685 25.569500406912177 26.24018288245409 23.712702661212052 32-33 24.20995092974626 25.62184077523229 26.044360742640826 24.123847552380624 34-35 24.44566481042578 25.96046014220475 26.023758598762935 23.570116448606534 36-37 24.268130555412835 26.00556183527719 26.1894684786518 23.536839130658173 38-39 24.20546141216267 25.973482572670203 26.27803255062533 23.543023464541797 40-41 24.35444475344462 25.698959468668132 26.229790371568782 23.71680540631846 42-43 24.25128104996641 25.733625104854053 25.952293172572105 24.06280067260743 44-45 24.292678540461036 25.773926894593846 25.90154984488705 24.031844720058064 46-47 24.270209304401835 25.91840037921048 25.69973132834785 24.111658988039842 48-49 23.942432540843537 26.207241182963564 25.89864450619875 23.951681769994153 50-51 24.178814975858597 25.96503791813921 26.017607889670497 23.838539216331693 52-53 24.43919015255929 25.780747241229157 25.83543455056216 23.944628055649396 54-55 23.92526215565728 25.859987765266524 25.98895020527699 24.225799873799208 56-57 24.04405575788794 25.981843714906056 25.718738469275326 24.255362057930682 58-59 23.985594654067448 26.02612719198521 25.972046126909376 24.01623202703796 60-61 24.06249036574212 25.991140336453977 26.169213536260777 23.777155761543124 62-63 24.045598155415675 25.78647439720679 26.15830112729951 24.009626320078034 64-65 23.878847061922396 25.698967906485198 26.095422875663733 24.326762155928673 66-67 23.889831161822528 26.077499807262356 25.75071312928841 24.281955901626706 68-69 23.862488789986664 25.980506782539877 25.87193989120184 24.28506453627162 70-71 23.757107520318673 25.790356259436535 26.06511612965402 24.387420090590766 72-73 23.783939522029772 25.928105322529042 25.93411174908426 24.35384340635692 74-75 23.812076561829 25.96416146835903 25.785993428949432 24.437768540862535 76-77 23.695389901916712 25.737346341595273 25.903205221240107 24.664058535247907 78-79 23.6271696498197 25.84815592015065 26.017322818959933 24.507351611069716 80-81 23.72120683273875 25.91873400022618 25.868357202339954 24.491701964695118 82-83 23.657984770601892 25.849250285535152 26.055644988263833 24.437119955599123 84-85 23.604131680284322 25.933148652347036 25.95107281578971 24.511646851578934 86-87 23.508821994441746 26.13379275061637 25.73861547518967 24.618769779752217 88-89 23.428344254036315 26.01593118910924 25.78283815952757 24.772886397326882 90-91 23.39372941024534 25.805063634399065 25.974274420990895 24.8269325343647 92-93 23.364903315924384 25.6997070452109 26.102564053139858 24.832825585724855 94-95 23.282742063522647 25.672002610167837 26.133823767427877 24.911431558881635 96-97 23.216700033591724 25.621109734471215 26.08092458818021 25.08126564375685 98-99 23.0146303242049 25.668062477521453 25.918634074911374 25.398673123362276 100-101 22.928581658624683 25.70048110610088 25.979183538991045 25.39175369628339 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 36.0 1 28.0 2 32.5 3 39.0 4 32.5 5 35.0 6 63.5 7 185.5 8 312.0 9 348.0 10 314.5 11 260.0 12 245.0 13 261.0 14 301.0 15 354.0 16 403.5 17 439.5 18 492.5 19 560.5 20 630.0 21 700.0 22 811.0 23 986.0 24 1245.0 25 1557.5 26 1957.5 27 2671.5 28 3743.5 29 5157.5 30 7064.5 31 9698.0 32 13267.0 33 16110.5 34 18472.5 35 21526.5 36 25403.5 37 29839.0 38 33595.0 39 37063.0 40 40395.5 41 43910.0 42 47661.5 43 51042.0 44 54630.0 45 58167.5 46 61429.5 47 64777.0 48 67312.0 49 68680.5 50 69244.5 51 69073.0 52 68227.0 53 67406.0 54 65955.5 55 62512.5 56 58142.5 57 52866.0 58 46916.0 59 40689.5 60 34006.5 61 28421.0 62 23467.5 63 18131.5 64 13620.0 65 10348.5 66 7992.5 67 6423.5 68 5060.5 69 3841.0 70 2880.0 71 2139.5 72 1542.5 73 1130.0 74 858.0 75 667.5 76 485.5 77 306.5 78 193.0 79 109.0 80 59.5 81 37.0 82 23.5 83 13.0 84 8.0 85 7.0 86 6.5 87 4.0 88 2.0 89 2.5 90 1.5 91 1.0 92 1.5 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11785068607081958 2 1.9267142136918734E-4 3 0.004688337919983559 4 0.0035323093917684345 5 0.02260678010731798 6 8.991332997228742E-4 7 6.422380712306245E-5 8 0.0014129237567073738 9 0.0 10-11 0.08326616593505046 12-13 3.2111903561531224E-5 14-15 0.004238771270122121 16-17 0.0 18-19 9.633571068459367E-5 20-21 4.495666498614371E-4 22-23 1.9267142136918734E-4 24-25 0.0017340427923226863 26-27 0.002183609442184123 28-29 0.0057159188339525584 30-31 0.01335855188159699 32-33 0.013197992363789334 34-35 0.009312452032844056 36-37 9.633571068459367E-4 38-39 2.2478332493071855E-4 40-41 0.003981876041629872 42-43 0.008284871118875055 44-45 0.008027975890382807 46-47 0.008734437768736492 48-49 0.010821711500236022 50-51 0.005298464087652653 52-53 0.0013486999495843114 54-55 8.027975890382806E-4 56-57 0.00472044982354509 58-59 0.008541766347367306 60-61 0.007128842590659932 62-63 0.01807900170514208 64-65 0.03275414163276185 66-67 0.03435973681083841 68-69 0.026395984727578668 70-71 0.03885540330945278 72-73 0.02498306097087129 74-75 0.024308710996079137 76-77 0.21351204678062113 78-79 0.05776931450719468 80-81 0.0502872409773579 82-83 0.021129632543487546 84-85 0.031919232140162034 86-87 0.07520607814110612 88-89 0.24485326465667556 90-91 0.29244310573486487 92-93 0.04312628648313643 94-95 0.004302995077245184 96-97 0.007963752083259744 98-99 9.633571068459367E-4 100-101 0.0011560285282151241 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1557055.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 73.58955597799903 #Duplication Level Percentage of deduplicated Percentage of total 1 84.87161242401449 62.45664273420051 2 9.383689213359508 13.8108304529333 3 2.5723587297472656 5.678962102146926 4 1.1058019398078787 3.255018950002872 5 0.6205440855760499 2.283278186115747 6 0.361645600352663 1.5968003490809612 7 0.253309353144416 1.3048645976080206 8 0.17540739819111217 1.0326522038512012 9 0.1306910830732511 0.8655748896279899 >10 0.505513451571339 5.894207969689156 >50 0.012676901235998477 0.6250299300436423 >100 0.00631155182379424 0.9365093965365701 >500 2.6296086141047476E-4 0.11223680357857603 >1k 1.7530724094031648E-4 0.14739143458450932 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.422380712306245E-5 0.0 5 0.0 0.0 0.0 6.422380712306245E-5 0.0 6 0.0 0.0 0.0 6.422380712306245E-5 0.0 7 0.0 0.0 0.0 6.422380712306245E-5 0.0 8 0.0 0.0 0.0 1.284476142461249E-4 0.0 9 0.0 0.0 0.0 1.284476142461249E-4 0.0 10-11 0.0 0.0 0.0 1.284476142461249E-4 0.0 12-13 0.0 0.0 0.0 1.284476142461249E-4 0.0 14-15 0.0 0.0 0.0 1.284476142461249E-4 9.633571068459367E-5 16-17 0.0 0.0 0.0 1.284476142461249E-4 1.9267142136918734E-4 18-19 0.0 0.0 0.0 1.284476142461249E-4 2.568952284922498E-4 20-21 0.0 0.0 0.0 1.6055951780765613E-4 2.568952284922498E-4 22-23 0.0 0.0 0.0 2.568952284922498E-4 3.2111903561531227E-4 24-25 0.0 0.0 0.0 5.137904569844996E-4 4.174547462999059E-4 26-27 0.0 0.0 0.0 8.027975890382807E-4 4.4956664986143716E-4 28-29 0.0 6.422380712306245E-5 0.0 0.001862490406568811 4.4956664986143716E-4 30-31 0.0 6.422380712306245E-5 0.0 0.008766549672298025 4.4956664986143716E-4 32-33 0.0 6.422380712306245E-5 0.0 0.024308710996079137 5.780142641075621E-4 34-35 0.0 6.422380712306245E-5 0.0 0.046947603006958646 7.064618783536869E-4 36-37 0.0 6.422380712306245E-5 0.0 0.07658688999425198 7.064618783536869E-4 38-39 0.0 6.422380712306245E-5 0.0 0.10898780068783698 7.385737819152181E-4 40-41 0.0 6.422380712306245E-5 0.0 0.1500589253430354 8.349094925998119E-4 42-43 0.0 6.422380712306245E-5 0.0 0.20419959474777705 8.349094925998119E-4 44-45 0.0 6.422380712306245E-5 0.0 0.2813644990061366 8.349094925998119E-4 46-47 0.0 6.422380712306245E-5 0.0 0.3700575766430858 8.349094925998119E-4 48-49 0.0 6.422380712306245E-5 0.0 0.44519943097706893 8.67021396161343E-4 50-51 0.0 6.422380712306245E-5 0.0 0.5161346259444913 9.95469010407468E-4 52-53 3.2111903561531224E-5 6.422380712306245E-5 0.0 0.6069149773129401 0.0010596928175305304 54-55 6.422380712306245E-5 1.284476142461249E-4 0.0 0.7305458060248353 0.0010918047210920615 56-57 6.422380712306245E-5 1.9267142136918734E-4 0.0 0.8865133216231925 0.0010918047210920615 58-59 6.422380712306245E-5 1.9267142136918734E-4 0.0 1.0312416709750138 0.0010918047210920615 60-61 6.422380712306245E-5 1.9267142136918734E-4 0.0 1.1606847542315462 0.0010918047210920615 62-63 6.422380712306245E-5 1.9267142136918734E-4 0.0 1.3075324892184286 0.0011560285282151241 64-65 6.422380712306245E-5 2.568952284922498E-4 0.0 1.497923965434747 0.0011560285282151241 66-67 6.422380712306245E-5 2.568952284922498E-4 0.0 1.7526034725812512 0.0011560285282151241 68-69 6.422380712306245E-5 2.568952284922498E-4 0.0 2.016755991278407 0.0011560285282151241 70-71 6.422380712306245E-5 2.8900713205378103E-4 0.0 2.247865361210747 0.0011560285282151241 72-73 6.422380712306245E-5 3.2111903561531227E-4 0.0 2.4839199642915633 0.0013165880460227803 74-75 6.422380712306245E-5 3.2111903561531227E-4 0.0 2.7862214244198182 0.0013486999495843114 76-77 6.422380712306245E-5 3.2111903561531227E-4 0.0 3.1685136363198474 0.0013486999495843114 78-79 6.422380712306245E-5 3.2111903561531227E-4 0.0 3.583527877949077 0.0013486999495843114 80-81 6.422380712306245E-5 3.2111903561531227E-4 0.0 3.958691247258446 0.0014129237567073738 82-83 6.422380712306245E-5 3.2111903561531227E-4 0.0 4.328556152480163 0.0015413713709534988 84-85 6.422380712306245E-5 3.2111903561531227E-4 0.0 4.758309757844135 0.0015413713709534988 86-87 6.422380712306245E-5 3.2111903561531227E-4 0.0 5.284495409603386 0.00157348327451503 88-89 6.422380712306245E-5 3.2111903561531227E-4 0.0 5.873106601886253 0.0016698189851996237 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1830 0.0 52.97339 1 GTATCAA 3170 0.0 39.875034 1 TATCAAC 4050 0.0 31.055536 2 ATCAACG 4095 0.0 30.598366 3 TCAACGC 4155 0.0 30.042284 4 CAACGCA 4240 0.0 29.259378 5 AACGCAG 4445 0.0 27.907265 6 GTGGTAT 855 0.0 26.12224 1 TGGTATC 960 0.0 22.742321 2 ACGCAGA 5380 0.0 22.349756 7 CGCAGAG 5675 0.0 21.02047 8 GTACATG 4935 0.0 19.836212 1 GTAAGTA 1025 0.0 18.984896 2 TACATGG 5155 0.0 18.96648 2 TAAGTAC 1255 0.0 18.909258 3 GCAGAGT 6160 0.0 17.822386 9 GTACACT 1510 0.0 17.626238 6 ACATGGG 5415 0.0 17.266964 3 CAGAGTA 5730 0.0 17.086266 10-11 AGTACAC 1515 0.0 16.942268 5 >>END_MODULE