##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921393_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2155713 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.187954982875734 31.0 31.0 34.0 26.0 34.0 2 30.261509301098986 31.0 31.0 34.0 26.0 34.0 3 30.306312575004185 31.0 31.0 34.0 26.0 34.0 4 33.763050554503316 37.0 35.0 37.0 28.0 37.0 5 33.76360072050407 37.0 35.0 37.0 28.0 37.0 6 33.80128662767261 37.0 35.0 37.0 29.0 37.0 7 33.712475176426544 37.0 35.0 37.0 28.0 37.0 8 33.68043612484593 37.0 35.0 37.0 28.0 37.0 9 35.21494326934986 39.0 35.0 39.0 28.0 39.0 10-11 35.10749691633348 39.0 35.0 39.0 28.0 39.0 12-13 34.99518627943516 39.0 35.0 39.0 27.0 39.0 14-15 36.10627203157378 40.0 36.0 41.0 27.0 41.0 16-17 36.06016385298043 40.0 36.0 41.0 27.0 41.0 18-19 36.01853887785619 40.0 36.0 41.0 27.0 41.0 20-21 35.96837055767628 40.0 36.0 41.0 27.0 41.0 22-23 35.852537884217426 40.0 36.0 41.0 27.0 41.0 24-25 35.754959959883344 40.0 36.0 41.0 27.0 41.0 26-27 35.613919153430906 40.0 36.0 41.0 26.0 41.0 28-29 35.47395594868148 40.0 36.0 41.0 25.0 41.0 30-31 35.32762640481363 39.5 35.5 41.0 25.0 41.0 32-33 35.15112308549422 39.0 35.0 41.0 24.0 41.0 34-35 34.98473938784987 39.0 35.0 41.0 24.0 41.0 36-37 34.819844988641805 39.0 35.0 41.0 23.5 41.0 38-39 35.03206642071556 39.0 35.0 41.0 24.0 41.0 40-41 35.154928554960705 40.0 35.0 41.0 24.0 41.0 42-43 34.99669482904264 40.0 35.0 41.0 23.0 41.0 44-45 34.881023587091605 40.0 35.0 41.0 22.0 41.0 46-47 34.725907391197254 40.0 35.0 41.0 20.5 41.0 48-49 34.58302635833249 39.0 35.0 41.0 19.0 41.0 50-51 32.90028032488554 37.0 32.5 39.5 15.5 40.0 52-53 33.056863552801325 37.5 32.5 39.5 14.0 40.0 54-55 33.928034251312674 39.0 34.0 40.5 14.0 41.0 56-57 33.96218536512049 39.0 34.0 41.0 13.0 41.0 58-59 33.801217509009774 38.5 34.0 41.0 12.5 41.0 60-61 33.57676091390644 38.0 34.0 40.5 8.5 41.0 62-63 33.30359004190261 37.5 33.5 40.0 7.5 41.0 64-65 33.02792881056059 37.0 33.0 40.0 6.5 41.0 66-67 32.70078206143397 36.5 33.0 40.0 2.0 41.0 68-69 32.34386975446175 36.0 32.5 39.0 2.0 41.0 70-71 31.96824507715081 35.5 32.0 39.0 2.0 41.0 72-73 31.611567727243838 35.0 32.0 38.5 2.0 40.0 74-75 31.20443560900732 35.0 32.0 37.0 2.0 39.5 76-77 30.819664074020984 35.0 31.0 37.0 2.0 39.0 78-79 30.463547559438574 35.0 31.0 36.0 2.0 39.0 80-81 30.100955693081595 35.0 31.0 36.0 2.0 37.5 82-83 29.787565181450404 35.0 31.0 35.5 2.0 37.0 84-85 29.538673747386596 35.0 31.0 35.0 2.0 37.0 86-87 29.299685069394673 35.0 30.0 35.0 2.0 36.0 88-89 29.091451181117336 35.0 30.0 35.0 2.0 36.0 90-91 28.83446057058616 34.0 30.0 35.0 2.0 36.0 92-93 28.643060091951014 34.0 30.0 35.0 2.0 35.0 94-95 28.438129055212823 34.0 30.0 35.0 2.0 35.0 96-97 28.201955455109285 34.0 29.0 35.0 2.0 35.0 98-99 27.974855419065527 34.0 29.0 35.0 2.0 35.0 100-101 26.94002401989504 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 81456.0 3 13548.0 4 9042.0 5 6783.0 6 6065.0 7 6175.0 8 6535.0 9 7192.0 10 7720.0 11 8483.0 12 8688.0 13 8713.0 14 9351.0 15 10149.0 16 10570.0 17 11284.0 18 10255.0 19 9383.0 20 9386.0 21 9743.0 22 10753.0 23 12224.0 24 14211.0 25 16556.0 26 19538.0 27 23306.0 28 27111.0 29 32183.0 30 38735.0 31 46589.0 32 57810.0 33 74851.0 34 102138.0 35 146641.0 36 241249.0 37 437983.0 38 502027.0 39 101274.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.12696239397561 19.519116299038096 13.995196268405602 24.358725038580694 2 15.406977418844258 19.897029669881316 40.243185247727105 24.452807663547325 3 18.720322066064572 24.288901502792413 29.97703970455618 27.013736726586835 4 12.79241452391418 16.36792603900887 37.737307217258554 33.10235221981839 5 13.765163395932356 37.50246564000124 35.034876332779945 13.697494631286453 6 32.530547004224495 36.31227424679334 17.523436575673287 13.633742173308866 7 28.106625689620213 32.14489691479771 21.6568237314259 18.091653664156173 8 26.060886700330215 35.2307320407062 20.270094081936705 18.438287177026876 9 26.372713188653325 15.787808219877238 19.837660695635147 38.001817895834286 10-11 25.01380393860008 25.63300918437515 28.585196053047955 20.767990823976813 12-13 25.636232528981672 23.2084680351302 28.267308378525236 22.887991057362896 14-15 22.893336547986706 24.81918154894159 25.526327941518062 26.761153961553642 16-17 22.96277099385236 27.920095719201406 26.297699801884267 22.81943348506197 18-19 22.91866813506104 27.275038819110254 27.645261655767 22.161031390061705 20-21 23.502408818142058 26.491732991818257 27.554861079693428 22.45099711034626 22-23 23.281720713566667 26.313060969321572 27.27704986584772 23.128168451264038 24-25 23.137222142940843 26.48163553228937 27.27717195202742 23.103970372742367 26-27 23.02187133344207 26.7091887813449 27.19073537303678 23.07820451217625 28-29 23.09070316983895 26.795274680865578 27.12882716562048 22.985194983674997 30-31 23.412804180297847 26.540813275405604 27.027348651287475 23.019033893009073 32-33 23.09820851352157 26.61488596268013 26.9628097975389 23.3240957262594 34-35 23.46503512968024 26.647177111161678 26.960977047928488 22.9268107112296 36-37 23.426957353112407 26.533820666249476 26.99142590339285 23.047796077245266 38-39 23.307131289035734 26.707946020448542 26.911095368853623 23.073827321662105 40-41 23.411684177833383 26.475297529787774 26.99431185719034 23.118706435188503 42-43 23.226738996213673 26.503629185232576 26.919944060521754 23.349687758032 44-45 23.236225422356082 26.604035143372734 26.876848298084223 23.28289113618696 46-47 23.39453443299774 26.58396716811004 26.626336445061945 23.39516195383027 48-49 23.192349320125754 26.720788252992655 26.683463555314574 23.403398871567017 50-51 23.30872238182014 26.6939618999323 26.684014951100753 23.313300767146806 52-53 23.488860492714426 26.55931952064489 26.693005693748034 23.258814292892644 54-55 23.125865739492596 26.501506038097183 26.959871521935163 23.41275670047505 56-57 23.229896014126663 26.644854666859125 26.739247816068872 23.38600150294534 58-59 23.244227613553427 26.566226135301857 26.867663944142546 23.32188230700217 60-61 23.343939724642926 26.5827825006398 26.86903651987635 23.204241254840923 62-63 23.297100480793258 26.488535689921473 26.94341236534709 23.27095146393818 64-65 23.094865529764196 26.360833579717983 26.90618044282295 23.638120447694863 66-67 23.116274194496782 26.47580590994038 26.837905557997182 23.570014337565652 68-69 23.253537942223897 26.377380968705094 26.90184076883585 23.467240320235163 70-71 23.136692653568648 26.280286746679987 26.91275604456889 23.67026455518247 72-73 23.10397885048304 26.377798956421184 26.80254153016551 23.71568066293027 74-75 23.12593550719973 26.462284462975582 26.815305170843573 23.59647485898111 76-77 23.09102891767069 26.257964455140403 26.89282024325255 23.75818638393635 78-79 23.101698500475358 26.223015646101956 26.88230904944875 23.79297680397394 80-81 23.13797755170215 26.40884188532599 26.667832095491395 23.785348467480468 82-83 23.159826879436284 26.396841093677864 26.81411391013222 23.62921811675363 84-85 23.221028544437324 26.37187453799742 26.777646467022663 23.629450450542596 86-87 23.02819409725322 26.450228588221293 26.779975002231943 23.741602312293544 88-89 23.020320423952263 26.270290955699043 26.792861312751974 23.91652730759672 90-91 23.037269388307383 26.2538250259574 26.82953763974335 23.879367945991866 92-93 23.069526099285934 26.11411923323459 27.031296172427126 23.78505849505235 94-95 23.002615883645493 26.04092404636508 26.99426830827898 23.96219176171044 96-97 22.958720166822342 25.918454140248983 27.056707830470145 24.066117862458533 98-99 22.8309798409925 25.813643396794504 27.020579834482472 24.334796927730522 100-101 22.95751972130906 25.76902990644731 27.088542783254177 24.184907588989457 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 67.0 1 51.0 2 54.0 3 80.0 4 78.0 5 94.5 6 156.0 7 334.5 8 507.0 9 527.0 10 459.0 11 410.0 12 448.0 13 497.0 14 578.5 15 666.0 16 741.0 17 869.0 18 948.5 19 1044.0 20 1180.0 21 1309.0 22 1476.0 23 1732.5 24 2103.5 25 2652.5 26 3561.5 27 4910.0 28 6713.0 29 9263.0 30 12885.5 31 17854.5 32 23963.0 33 29344.5 34 34316.5 35 40172.5 36 47406.0 37 54222.5 38 59950.0 39 65132.5 40 69006.5 41 72771.0 42 76692.5 43 80934.5 44 84727.5 45 88737.0 46 91267.0 47 91727.5 48 92712.5 49 92988.0 50 90878.0 51 87789.5 52 85206.0 53 82112.0 54 78806.0 55 74325.5 56 67375.5 57 59577.0 58 52883.5 59 45730.0 60 37428.0 61 30414.0 62 24579.5 63 18459.0 64 13067.5 65 9390.5 66 6898.5 67 5207.5 68 3996.0 69 3069.5 70 2229.5 71 1572.5 72 1123.5 73 829.0 74 630.0 75 456.5 76 322.5 77 224.0 78 164.0 79 123.5 80 94.0 81 74.5 82 64.5 83 56.0 84 43.0 85 36.5 86 28.0 87 22.5 88 23.5 89 20.0 90 13.5 91 9.0 92 12.0 93 11.0 94 10.0 95 10.5 96 8.0 97 7.5 98 4.5 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05278995858910717 2 0.06058320379382599 3 0.05214052148871394 4 0.05937710632166712 5 0.05102720074518268 6 0.019854219926307443 7 0.01669981115296888 8 0.02152420104160433 9 0.021988084684742355 10-11 0.0246322214506291 12-13 0.02987410661808877 14-15 0.04622600503870413 16-17 0.030593126264952707 18-19 0.024330697082589378 20-21 0.02832009641357639 22-23 0.04972832654439621 24-25 0.0436282566371312 26-27 0.03142811682260115 28-29 0.01994699665493505 30-31 0.012455275818255956 32-33 0.00985752741668302 34-35 0.009254478680603587 36-37 0.0015772043866692832 38-39 0.00723658483295318 40-41 0.004105370241771516 42-43 0.22345275089958638 44-45 0.19670985887267925 46-47 0.20364491933759274 48-49 0.20051370474641106 50-51 0.1994467723671936 52-53 0.20438713316661355 54-55 0.20285631714425809 56-57 0.21354883511858955 58-59 0.20981457179132845 60-61 0.21577547660565202 62-63 0.2124819027393721 64-65 0.21361841766506023 66-67 0.20278673459778734 68-69 0.2020909091330803 70-71 0.18499679688344414 72-73 0.19364822682796828 74-75 0.1920246340769852 76-77 0.19121283770149367 78-79 0.21793253554624387 80-81 0.22542425638292293 82-83 0.2246124600074314 84-85 0.22039111885487542 86-87 0.2375548136509823 88-89 0.2362791336323527 90-91 0.2353745605282336 92-93 0.23873771694098425 94-95 0.24994050692276754 96-97 0.2505667498410039 98-99 0.24054686314922258 100-101 0.2492910698223743 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2155713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.78875956416248 #Duplication Level Percentage of deduplicated Percentage of total 1 82.02159123208071 53.96098744637376 2 10.538686064416817 13.866541672282157 3 3.1364659915940702 6.190326210064644 4 1.3668629135485542 3.596968623064657 5 0.7557809220440682 2.4860944681769115 6 0.4788061062745026 1.8900035882127648 7 0.3304260266870914 1.5216822896421014 8 0.24158239807043858 1.2714725041271902 9 0.176204399009988 1.0433041956554265 >10 0.8965682813441048 10.34050944359375 >50 0.04299093982380706 1.9116472310275492 >100 0.01304373564163989 1.4346126635645031 >500 8.494195407740348E-4 0.3651905556188303 >1k 1.4156992346231025E-4 0.12065910859579655 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 4.6388364313802443E-5 10-11 0.0 0.0 0.0 6.958254647070366E-5 1.159709107845061E-4 12-13 0.0 0.0 0.0 9.277672862760489E-5 1.6235927509830855E-4 14-15 0.0 0.0 0.0 9.277672862760489E-5 1.8555345725520977E-4 16-17 0.0 0.0 0.0 9.277672862760489E-5 2.319418215690122E-4 18-19 0.0 0.0 0.0 1.159709107845061E-4 2.319418215690122E-4 20-21 0.0 2.3194182156901222E-5 0.0 1.3916509294140732E-4 2.7833018588281465E-4 22-23 0.0 4.6388364313802443E-5 0.0 2.319418215690122E-4 2.7833018588281465E-4 24-25 0.0 4.6388364313802443E-5 0.0 3.247185501966171E-4 2.7833018588281465E-4 26-27 0.0 4.6388364313802443E-5 0.0 5.33466189608728E-4 3.0152436803971585E-4 28-29 0.0 4.6388364313802443E-5 0.0 0.0019715054833366035 3.247185501966171E-4 30-31 0.0 4.6388364313802443E-5 0.0 0.006865477918442761 3.247185501966171E-4 32-33 4.6388364313802443E-5 4.6388364313802443E-5 0.0 0.018045073718069148 3.7110691451041955E-4 34-35 1.159709107845061E-4 6.958254647070366E-5 0.0 0.03312129212005494 4.1749527882422194E-4 36-37 1.3916509294140732E-4 9.277672862760489E-5 0.0 0.05837975648892037 4.1749527882422194E-4 38-39 1.3916509294140732E-4 9.277672862760489E-5 0.0 0.10305175132311212 5.102720074518268E-4 40-41 1.3916509294140732E-4 9.277672862760489E-5 0.0 0.15250174768162553 5.102720074518268E-4 42-43 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.20580197827818453 5.102720074518268E-4 44-45 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.26951639666319216 5.102720074518268E-4 46-47 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.3443640224835124 5.102720074518268E-4 48-49 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.4272600295122774 5.102720074518268E-4 50-51 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.511408522377515 5.102720074518268E-4 52-53 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.6020745804288419 5.566603717656293E-4 54-55 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.7035027390009709 5.566603717656293E-4 56-57 1.8555345725520977E-4 9.277672862760489E-5 0.0 0.8229527771090122 6.262429182363329E-4 58-59 1.8555345725520977E-4 1.159709107845061E-4 0.0 0.9538375470204058 6.494371003932342E-4 60-61 2.319418215690122E-4 1.8555345725520977E-4 0.0 1.0952524756310327 6.494371003932342E-4 62-63 2.319418215690122E-4 1.8555345725520977E-4 0.0 1.2398218130149978 6.958254647070366E-4 64-65 2.319418215690122E-4 1.8555345725520977E-4 0.0 1.4044541179646828 6.958254647070366E-4 66-67 2.319418215690122E-4 2.08747639412111E-4 0.0 1.5914224203314635 6.958254647070366E-4 68-69 2.319418215690122E-4 2.319418215690122E-4 0.0 1.797015650970236 6.958254647070366E-4 70-71 2.319418215690122E-4 2.319418215690122E-4 0.0 2.01599192471354 6.958254647070366E-4 72-73 2.319418215690122E-4 2.319418215690122E-4 0.0 2.2415785403715613 7.190196468639378E-4 74-75 2.319418215690122E-4 2.319418215690122E-4 0.0 2.480664170044899 7.422138290208391E-4 76-77 2.319418215690122E-4 2.319418215690122E-4 0.0 2.7544946845892753 7.422138290208391E-4 78-79 2.319418215690122E-4 2.319418215690122E-4 0.0 3.0559030817182062 7.422138290208391E-4 80-81 2.319418215690122E-4 2.319418215690122E-4 0.0 3.3865361483648333 7.654080111777403E-4 82-83 2.319418215690122E-4 2.319418215690122E-4 0.0 3.730807394119718 7.886021933346415E-4 84-85 2.319418215690122E-4 2.319418215690122E-4 0.0 4.092219140488552 7.886021933346415E-4 86-87 2.319418215690122E-4 2.7833018588281465E-4 0.0 4.485453304776656 8.117963754915426E-4 88-89 2.319418215690122E-4 2.7833018588281465E-4 0.0 4.9088399058687315 8.349905576484439E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1805 0.0 48.898 1 GTATCAA 3215 0.0 42.212437 1 TCAACGC 3950 0.0 33.27962 4 CAACGCA 4090 0.0 32.253498 5 ATCAACG 4115 0.0 31.94372 3 TATCAAC 4275 0.0 31.526655 2 AACGCAG 4325 0.0 30.382113 6 GTACATG 5500 0.0 27.867317 1 TACATGG 5755 0.0 25.810398 2 ACGCAGA 5170 0.0 24.685762 7 ACATGGG 5870 0.0 24.333464 3 CGCAGAG 5255 0.0 23.929218 8 CATGGGG 4820 0.0 22.152931 4 GTATACG 110 0.0028950754 21.569134 1 TATACCG 200 5.44318E-7 21.353441 5 GCAGAGT 5975 0.0 19.537214 9 AGAGTAC 5135 0.0 18.806131 10-11 ACTGCGT 395 1.8189894E-11 18.019783 8 ATGGGGG 3045 0.0 17.60948 5 TAAGGTG 1085 0.0 17.493858 5 >>END_MODULE