##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921393_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2155713 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.462686359455084 33.0 31.0 34.0 30.0 34.0 2 31.597930243961045 34.0 31.0 34.0 29.0 34.0 3 31.671167729656034 34.0 31.0 34.0 28.0 34.0 4 35.17003330220674 37.0 35.0 37.0 33.0 37.0 5 34.92714429054332 37.0 35.0 37.0 32.0 37.0 6 34.890159311559565 37.0 35.0 37.0 32.0 37.0 7 34.76086983749692 37.0 35.0 37.0 32.0 37.0 8 34.72430977593029 37.0 35.0 37.0 32.0 37.0 9 36.35264666493174 39.0 37.0 39.0 32.0 39.0 10-11 36.20269534952009 39.0 37.0 39.0 32.0 39.0 12-13 36.14696367280803 39.0 37.0 39.0 32.0 39.0 14-15 37.394931050654705 40.0 38.0 41.0 32.0 41.0 16-17 37.38256112942679 40.0 38.0 41.0 32.0 41.0 18-19 37.35489534089186 40.0 38.0 41.0 32.0 41.0 20-21 37.327646583752106 40.0 38.0 41.0 31.5 41.0 22-23 37.221827766497675 40.0 38.0 41.0 31.0 41.0 24-25 37.16139277352783 40.0 38.0 41.0 31.0 41.0 26-27 37.02807980468643 40.0 37.0 41.0 31.0 41.0 28-29 36.87790211405692 40.0 37.0 41.0 30.0 41.0 30-31 36.74329003907292 40.0 37.0 41.0 30.0 41.0 32-33 36.68686601602347 40.0 37.0 41.0 30.0 41.0 34-35 36.8109323922062 40.0 37.0 41.0 30.0 41.0 36-37 36.791780028231955 40.0 37.0 41.0 30.0 41.0 38-39 36.70518895604378 40.0 37.0 41.0 30.0 41.0 40-41 36.589521193220065 40.0 37.0 41.0 30.0 41.0 42-43 36.4900455209019 40.0 37.0 41.0 30.0 41.0 44-45 36.35064941390621 40.0 37.0 41.0 29.5 41.0 46-47 36.198416486795786 40.0 36.0 41.0 29.0 41.0 48-49 36.04899214320274 40.0 36.0 41.0 28.0 41.0 50-51 35.90343821278621 40.0 36.0 41.0 28.0 41.0 52-53 35.745305149618716 40.0 35.0 41.0 28.0 41.0 54-55 35.55311630073206 39.0 35.0 41.0 27.0 41.0 56-57 35.30169577304586 39.0 35.0 41.0 26.5 41.0 58-59 35.09471321089589 39.0 35.0 41.0 26.0 41.0 60-61 34.836970876921 38.5 35.0 40.0 26.0 41.0 62-63 34.55660169048477 38.0 34.5 40.0 26.0 41.0 64-65 34.2525324567788 37.0 34.0 40.0 26.0 41.0 66-67 33.92032241768733 37.0 34.0 40.0 25.0 41.0 68-69 33.56177468893122 36.0 34.0 39.0 24.0 41.0 70-71 33.181083938353574 36.0 34.0 39.0 23.0 40.5 72-73 32.779087243988414 35.0 33.0 38.5 22.0 40.0 74-75 32.36140873112515 35.0 33.0 37.0 21.5 39.5 76-77 29.569511804215125 33.0 29.0 34.5 15.0 36.5 78-79 31.221214744263264 34.5 31.5 36.0 19.0 38.5 80-81 31.405419459826053 35.0 32.0 36.0 20.0 37.5 82-83 31.225918524404683 35.0 32.0 35.5 19.5 37.0 84-85 30.97928782727571 35.0 32.0 35.0 18.0 37.0 86-87 30.722253611682074 35.0 32.0 35.0 16.0 36.0 88-89 30.427470864628084 35.0 32.0 35.0 8.0 36.0 90-91 30.23368416853264 35.0 32.0 35.0 4.5 35.5 92-93 30.084493390353913 34.0 32.0 35.0 2.0 35.0 94-95 29.98491844693612 34.0 32.0 35.0 2.0 35.0 96-97 29.790325057185257 34.0 31.0 35.0 2.0 35.0 98-99 29.528513072009122 34.0 31.0 35.0 2.0 35.0 100-101 28.44831825943435 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 36298.0 3 12201.0 4 6833.0 5 4655.0 6 4124.0 7 4211.0 8 4380.0 9 4794.0 10 5439.0 11 6036.0 12 6417.0 13 7058.0 14 7906.0 15 8882.0 16 9829.0 17 10679.0 18 9741.0 19 8467.0 20 7872.0 21 7790.0 22 8166.0 23 9119.0 24 10621.0 25 12976.0 26 15587.0 27 18753.0 28 22425.0 29 26993.0 30 32737.0 31 40690.0 32 52085.0 33 68358.0 34 97603.0 35 144948.0 36 252224.0 37 500090.0 38 583350.0 39 85370.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.79387554944761 20.85440875232126 14.491246703082016 24.86046899514911 2 14.827014988586113 21.485990443042585 38.4952129394208 25.191781628950505 3 17.3302411934089 25.509551288682868 29.8563305441291 27.30387697377913 4 12.595141326650614 17.699267353216655 36.709301176604846 32.99629014352789 5 13.642716478800827 37.917269118048296 34.90439351783968 13.5356208853112 6 32.37829274685309 37.10783347288681 17.160624117159976 13.353249663100128 7 28.009704459319668 32.42574372248586 21.5832834657723 17.981268352422173 8 26.101389688462433 35.93785299464712 19.88766333142054 18.0730939854699 9 26.214157450458387 15.872474675432214 19.666207885743603 38.247159988365794 10-11 24.95605196537283 26.102334661700553 28.425572543455207 20.51604082947141 12-13 25.599676208015477 23.45153905566856 28.28100319848959 22.66778153782637 14-15 22.75047666764088 25.115675986620833 25.4577864992879 26.67606084645039 16-17 22.87698125531149 28.294538582291445 26.21403495099513 22.614445211401936 18-19 22.899954214472032 27.474401622115845 27.667656444324656 21.957987719087463 20-21 23.4291286249116 26.62961125449131 27.565065578755394 22.3761945418417 22-23 23.22572833942994 26.43186683171681 27.29093474372811 23.051470085125146 24-25 23.031370684356407 26.75642200238904 27.285096315539214 22.92711099771533 26-27 23.036799556143364 26.87387707936025 27.223539431939585 22.865783932556802 28-29 23.071823578627708 26.963213614611288 27.13140605961356 22.833556747147444 30-31 23.364256606175637 26.681245631587995 27.060875568372012 22.893622193864356 32-33 23.11722108050791 26.75884511556987 26.90466596563165 23.21926783829057 34-35 23.40429381634495 26.7890650136155 27.064645710625886 22.741995459413666 36-37 23.420285081742684 26.668769620969545 27.057878018599546 22.853067278688222 38-39 23.309996817747873 26.777839835302213 26.96408972281007 22.94807362413984 40-41 23.40152073421666 26.661419876150696 27.00930389099851 22.92775549863414 42-43 23.29728809407608 26.609440268110145 26.876334937268386 23.21693670054539 44-45 23.314999838786488 26.701550642035716 26.89027483540564 23.093174683772155 46-47 23.48704951546011 26.68231965830642 26.619967492438523 23.210663333794944 48-49 23.21446259031406 26.8278832706361 26.708628233032833 23.24902590601701 50-51 23.331963250862408 26.84794125779138 26.662585800254966 23.157509691091246 52-53 23.57252236308568 26.67178649080821 26.633097877089895 23.12259326901622 54-55 23.184334347545132 26.673229122645715 26.840483611565073 23.301952918244076 56-57 23.254194042227468 26.756673064767728 26.667810979605328 23.32132191339948 58-59 23.292550396830457 26.644599266765407 26.760464714389933 23.302385622014203 60-61 23.29301516425527 26.756426686769696 26.807712604018676 23.142845544956366 62-63 23.305782171446655 26.667017735388676 26.794469600503128 23.232730492661542 64-65 23.080337358902074 26.53562106288936 26.839174468381305 23.544867109827262 66-67 23.101889363155514 26.680258906885037 26.683994568672603 23.53385716128685 68-69 23.212829062454468 26.66019530999871 26.70439201573171 23.422583611815114 70-71 23.151422871285153 26.496044008978885 26.66306391260947 23.689469207126493 72-73 23.14332207504525 26.645370421496757 26.50860518951555 23.702702313942446 74-75 23.06780547728778 26.750341329986348 26.54446453822142 23.637388654504456 76-77 23.114160060544975 26.41307064626645 26.68150065043996 23.791268642748612 78-79 23.09178652017638 26.447909157205814 26.68056801813365 23.77973630448416 80-81 23.21139272672842 26.532205942588472 26.51338515432002 23.743016176363085 82-83 23.205976000881552 26.602738613758024 26.531309628065863 23.65997575729456 84-85 23.163928846449664 26.57761761497928 26.49464891315873 23.76380462541232 86-87 23.04713877792343 26.641142998544304 26.4686226249142 23.84309559861807 88-89 23.020492496224797 26.50091202573906 26.479934154602258 23.998661323433886 90-91 22.964646969989598 26.457995443873312 26.571433225286274 24.00592436085082 92-93 22.990738875651047 26.348325766569914 26.67430304864295 23.986632309136088 94-95 22.917482856817458 26.29332650459073 26.63564506218586 24.153545576405953 96-97 22.85628259553916 26.14186886928984 26.742265855497855 24.25958267967314 98-99 22.7154013083611 26.11512686983282 26.62359893007941 24.545872891726674 100-101 22.716062383114004 26.133778235586508 26.66214991607055 24.488009465228945 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 38.5 2 36.0 3 55.0 4 60.5 5 64.0 6 115.0 7 268.0 8 415.5 9 435.5 10 378.0 11 314.5 12 304.0 13 325.5 14 361.5 15 412.5 16 462.0 17 553.0 18 649.0 19 706.0 20 820.0 21 977.0 22 1168.5 23 1459.5 24 1840.0 25 2428.5 26 3367.5 27 4731.0 28 6659.5 29 9430.0 30 13037.0 31 17829.5 32 24110.5 33 29726.5 34 34812.0 35 40725.0 36 47869.5 37 54728.0 38 60518.0 39 65841.5 40 69411.5 41 73045.5 42 77505.0 43 82044.0 44 85988.5 45 90118.0 46 92646.0 47 93030.5 48 93918.5 49 93614.5 50 91686.5 51 88760.0 52 85711.5 53 82735.0 54 79119.5 55 73989.5 56 67299.0 57 59457.0 58 51953.0 59 44706.0 60 36370.5 61 29301.5 62 23618.0 63 17623.5 64 12208.0 65 8571.5 66 6275.0 67 4668.5 68 3480.5 69 2604.0 70 1923.5 71 1360.5 72 934.5 73 656.0 74 484.0 75 317.5 76 194.5 77 120.5 78 69.5 79 44.5 80 26.5 81 21.5 82 13.0 83 10.0 84 7.5 85 1.5 86 1.5 87 2.5 88 2.5 89 2.5 90 1.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 1.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1541949229790793 2 2.7833018588281465E-4 3 0.006494371003932342 4 0.0048243898886354535 5 0.029178281153381735 6 0.0012988742007864684 7 1.3916509294140732E-4 8 0.002319418215690122 9 0.0 10-11 0.10750503429723715 12-13 3.7110691451041955E-4 14-15 0.0057057688105977 16-17 4.1749527882422194E-4 18-19 4.638836431380244E-4 20-21 0.001043738197060555 22-23 2.0874763941211097E-4 24-25 0.0017627578439244928 26-27 0.0028760785874557514 28-29 0.006795895371972058 30-31 0.015053024219828891 32-33 0.0152385776770841 34-35 0.012269722361000745 36-37 7.190196468639378E-4 38-39 3.247185501966171E-4 40-41 0.005079525892361368 42-43 0.00839629394079824 44-45 0.008651429944524155 46-47 0.009950304145310623 48-49 0.011527508531979907 50-51 0.005798545539225305 52-53 0.0018555345725520976 54-55 7.422138290208391E-4 56-57 0.005821739721382207 58-59 0.009068925223348377 60-61 0.006981448829227267 62-63 0.01806826790022605 64-65 0.0342346128635862 66-67 0.037435410001238574 68-69 0.0266733094804364 70-71 0.040821760596146145 72-73 0.025977484015729368 74-75 0.02507291091161022 76-77 0.2433301650080507 78-79 0.06893310937031043 80-81 0.054761464072443776 82-83 0.019738249015522936 84-85 0.03170644700848397 86-87 0.0818522688317044 88-89 0.2703745814029975 90-91 0.3227702388954374 92-93 0.05172302620988972 94-95 0.005497021171185589 96-97 0.010321411059821043 98-99 0.001809146208238295 100-101 0.0015540102045123816 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2155713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.76956463685252 #Duplication Level Percentage of deduplicated Percentage of total 1 81.24709796099071 52.62339162941076 2 10.957490737372762 14.194238091439557 3 3.292576765236557 6.39776290853364 4 1.436811151487954 3.7224653098899814 5 0.7933785665252572 2.569339217302552 6 0.5051249473023353 1.96300337543912 7 0.3339936011521699 1.5142834096684428 8 0.23551784679016097 1.220351072064613 9 0.18765146428697202 1.0938693280801552 >10 0.9500727454337046 10.73576455165306 >50 0.04617402145877435 2.031967916668713 >100 0.013175517755830769 1.4501404508470261 >500 7.189801590683242E-4 0.3055794252319286 >1k 2.156940477204847E-4 0.17784331377029533 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.6388364313802443E-5 0.0 3 0.0 0.0 0.0 4.6388364313802443E-5 0.0 4 0.0 0.0 0.0 4.6388364313802443E-5 0.0 5 0.0 0.0 0.0 4.6388364313802443E-5 0.0 6 0.0 0.0 0.0 4.6388364313802443E-5 4.6388364313802443E-5 7 0.0 0.0 0.0 4.6388364313802443E-5 4.6388364313802443E-5 8 0.0 0.0 0.0 4.6388364313802443E-5 4.6388364313802443E-5 9 0.0 0.0 0.0 4.6388364313802443E-5 4.6388364313802443E-5 10-11 0.0 0.0 0.0 1.6235927509830855E-4 4.6388364313802443E-5 12-13 0.0 0.0 0.0 1.8555345725520977E-4 1.159709107845061E-4 14-15 0.0 0.0 0.0 1.8555345725520977E-4 1.8555345725520975E-4 16-17 0.0 0.0 0.0 1.8555345725520977E-4 2.319418215690122E-4 18-19 0.0 0.0 0.0 1.8555345725520977E-4 2.319418215690122E-4 20-21 0.0 0.0 0.0 1.8555345725520977E-4 2.319418215690122E-4 22-23 0.0 0.0 0.0 3.0152436803971585E-4 2.319418215690122E-4 24-25 0.0 0.0 0.0 3.7110691451041955E-4 2.319418215690122E-4 26-27 0.0 0.0 0.0 5.798545539225305E-4 2.319418215690122E-4 28-29 6.958254647070366E-5 0.0 0.0 0.0020642822119642085 2.319418215690122E-4 30-31 9.277672862760489E-5 0.0 0.0 0.007190196468639378 2.319418215690122E-4 32-33 9.277672862760489E-5 0.0 0.0 0.018671316636305484 2.319418215690122E-4 34-35 1.3916509294140732E-4 0.0 0.0 0.03390989431338958 2.319418215690122E-4 36-37 1.3916509294140732E-4 0.0 0.0 0.05949307723245163 2.319418215690122E-4 38-39 1.3916509294140732E-4 0.0 0.0 0.1044202080703693 2.319418215690122E-4 40-41 1.3916509294140732E-4 0.0 0.0 0.15426450552555002 2.319418215690122E-4 42-43 1.3916509294140732E-4 0.0 0.0 0.20837653249760058 2.319418215690122E-4 44-45 1.3916509294140732E-4 0.0 0.0 0.2722533101577065 2.5513600372591345E-4 46-47 1.3916509294140732E-4 0.0 0.0 0.34879411127548055 2.7833018588281465E-4 48-49 1.3916509294140732E-4 0.0 0.0 0.4321308077652266 2.7833018588281465E-4 50-51 1.3916509294140732E-4 0.0 0.0 0.5172070679167403 2.7833018588281465E-4 52-53 1.3916509294140732E-4 0.0 0.0 0.6077571550572827 3.0152436803971585E-4 54-55 1.3916509294140732E-4 0.0 0.0 0.7105769645588258 3.4791273235351835E-4 56-57 1.3916509294140732E-4 0.0 0.0 0.830769216495888 3.9430109666732075E-4 58-59 1.3916509294140732E-4 0.0 0.0 0.9615612096786539 4.1749527882422194E-4 60-61 1.8555345725520977E-4 0.0 0.0 1.1039270997577137 4.1749527882422194E-4 62-63 1.8555345725520977E-4 0.0 0.0 1.2493314276993273 4.1749527882422194E-4 64-65 1.8555345725520977E-4 0.0 0.0 1.415169830121171 4.1749527882422194E-4 66-67 1.8555345725520977E-4 0.0 0.0 1.603019511409914 4.1749527882422194E-4 68-69 1.8555345725520977E-4 0.0 0.0 1.8087982955059416 4.1749527882422194E-4 70-71 1.8555345725520977E-4 0.0 0.0 2.029699686368269 4.1749527882422194E-4 72-73 1.8555345725520977E-4 0.0 0.0 2.2575825260598235 5.102720074518268E-4 74-75 2.08747639412111E-4 0.0 0.0 2.4993818750455183 5.102720074518268E-4 76-77 2.319418215690122E-4 0.0 0.0 2.7762972158167623 5.102720074518268E-4 78-79 2.319418215690122E-4 0.0 0.0 3.0814862646372685 5.102720074518268E-4 80-81 2.319418215690122E-4 0.0 0.0 3.41687413862606 5.102720074518268E-4 82-83 2.319418215690122E-4 0.0 0.0 3.7651579778940887 5.102720074518268E-4 84-85 2.319418215690122E-4 0.0 0.0 4.1315332792445005 5.33466189608728E-4 86-87 2.319418215690122E-4 0.0 0.0 4.531934445819086 6.262429182363329E-4 88-89 2.319418215690122E-4 0.0 0.0 4.963137486298037 6.958254647070366E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2010 0.0 50.365166 1 GTATCAA 3530 0.0 41.065 1 TCAACGC 4530 0.0 30.693077 4 CAACGCA 4580 0.0 30.308538 5 ATCAACG 4740 0.0 29.533485 3 TATCAAC 4855 0.0 28.83393 2 AACGCAG 4845 0.0 28.74691 6 ACGCAGA 5720 0.0 23.933918 7 GTACATG 5550 0.0 23.549755 1 CGCAGAG 5880 0.0 22.635916 8 TACATGG 5805 0.0 22.316774 2 ACATGGG 5695 0.0 22.081224 3 CATGGGG 4705 0.0 19.667358 4 AGAGTAC 5715 0.0 19.421734 10-11 GCAGAGT 6630 0.0 18.856434 9 GTACTAC 545 0.0 17.441353 1 GTACACT 1665 0.0 16.815462 4 CAGAGTA 6355 0.0 16.680407 9 TACACTG 2420 0.0 16.501049 5 TAAGGTG 1045 0.0 16.376982 5 >>END_MODULE