##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921391_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1523239 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.435317766942678 33.0 31.0 34.0 29.0 34.0 2 31.569070907454446 34.0 31.0 34.0 29.0 34.0 3 31.643725639902865 34.0 31.0 34.0 28.0 34.0 4 35.13670277612378 37.0 35.0 37.0 33.0 37.0 5 34.88553142349953 37.0 35.0 37.0 32.0 37.0 6 34.85004585623136 37.0 35.0 37.0 32.0 37.0 7 34.71468233153169 37.0 35.0 37.0 32.0 37.0 8 34.68089052341753 37.0 35.0 37.0 32.0 37.0 9 36.3090473655152 39.0 37.0 39.0 32.0 39.0 10-11 36.15757376222641 39.0 37.0 39.0 32.0 39.0 12-13 36.09475236650322 39.0 37.0 39.0 32.0 39.0 14-15 37.3481390641915 40.0 38.0 41.0 32.0 41.0 16-17 37.333278297102424 40.0 38.0 41.0 32.0 41.0 18-19 37.305685122295316 40.0 38.0 41.0 31.5 41.0 20-21 37.27182569511416 40.0 38.0 41.0 31.0 41.0 22-23 37.160658635972425 40.0 38.0 41.0 31.0 41.0 24-25 37.104145508354236 40.0 38.0 41.0 31.0 41.0 26-27 36.973346270677155 40.0 37.0 41.0 30.5 41.0 28-29 36.82486070800446 40.0 37.0 41.0 30.0 41.0 30-31 36.68573644713666 40.0 37.0 41.0 30.0 41.0 32-33 36.63198913630757 40.0 37.0 41.0 30.0 41.0 34-35 36.753640433313485 40.0 37.0 41.0 30.0 41.0 36-37 36.734961814922016 40.0 37.0 41.0 30.0 41.0 38-39 36.65067136542591 40.0 37.0 41.0 30.0 41.0 40-41 36.52860122410206 40.0 37.0 41.0 30.0 41.0 42-43 36.42119719886374 40.0 37.0 41.0 30.0 41.0 44-45 36.28049800458103 40.0 36.5 41.0 29.0 41.0 46-47 36.11732039423886 40.0 36.0 41.0 28.5 41.0 48-49 35.95618448582265 40.0 36.0 41.0 28.0 41.0 50-51 35.81615688673938 40.0 35.5 41.0 28.0 41.0 52-53 35.65674034081323 39.5 35.0 41.0 27.0 41.0 54-55 35.458456946020945 39.0 35.0 41.0 27.0 41.0 56-57 35.20827723029676 39.0 35.0 41.0 26.0 41.0 58-59 34.996318043327406 39.0 35.0 41.0 26.0 41.0 60-61 34.734588597061915 38.0 35.0 40.0 26.0 41.0 62-63 34.4577702514182 38.0 34.0 40.0 26.0 41.0 64-65 34.150557791653185 37.0 34.0 40.0 25.0 41.0 66-67 33.82243036056718 37.0 34.0 39.5 24.0 41.0 68-69 33.47186160543421 36.0 34.0 39.0 23.0 41.0 70-71 33.09378633293922 36.0 33.5 39.0 22.5 40.5 72-73 32.69359765604741 35.0 33.0 38.5 22.0 40.0 74-75 32.27708553943275 35.0 33.0 37.0 20.5 39.5 76-77 29.514633947791516 33.0 29.0 34.5 14.0 36.5 78-79 31.160697040976498 34.5 31.5 36.0 18.5 38.0 80-81 31.345202886743316 35.0 32.0 36.0 19.0 37.0 82-83 31.17231307759321 35.0 32.0 35.5 18.5 37.0 84-85 30.929419808710257 35.0 32.0 35.0 17.5 37.0 86-87 30.670675448829762 35.0 32.0 35.0 12.5 36.0 88-89 30.385916130036062 35.0 32.0 35.0 7.0 36.0 90-91 30.19508297778615 35.0 32.0 35.0 4.5 35.5 92-93 30.053188961154486 34.0 32.0 35.0 2.0 35.0 94-95 29.95911114408179 34.0 32.0 35.0 2.0 35.0 96-97 29.771268330183247 34.0 31.0 35.0 2.0 35.0 98-99 29.511477516003726 34.0 31.0 35.0 2.0 35.0 100-101 28.442073765180645 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 27429.0 3 9076.0 4 4979.0 5 3427.0 6 3137.0 7 3111.0 8 3146.0 9 3466.0 10 3910.0 11 4190.0 12 4680.0 13 5062.0 14 5530.0 15 6320.0 16 6971.0 17 7815.0 18 6974.0 19 5923.0 20 5484.0 21 5393.0 22 5630.0 23 6532.0 24 7429.0 25 8787.0 26 10671.0 27 13052.0 28 15557.0 29 18866.0 30 22918.0 31 28164.0 32 36112.0 33 47822.0 34 68411.0 35 102657.0 36 179934.0 37 357454.0 38 409297.0 39 57921.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.583931897480674 21.3807223006428 14.657912782437354 24.37743301943917 2 15.147876551801106 21.7386737393565 38.132324074499586 24.98112563434281 3 17.276610384034097 25.665760209461208 29.663801106394267 27.393828300110428 4 12.76548111908129 17.67698850692434 36.31624143731067 33.2412889366837 5 13.820467679966693 37.74771337709693 34.76966981618369 13.662149126752684 6 32.84907442846442 36.87298166188623 16.895250262437294 13.38269364721206 7 28.398498200216775 32.1809643791946 21.56299832134025 17.857539099248378 8 26.269215240233585 35.892804973723166 19.722296079647847 18.115683706395398 9 26.285566480375046 15.845707732010538 19.505671795430658 38.36305399218376 10-11 25.22836151434899 25.962634141853574 28.278022750721227 20.530981593076213 12-13 25.824568820776566 23.236754920693485 28.316041741411617 22.622634517118332 14-15 22.95835631187794 24.971473778197957 25.2656976286142 26.80447228130991 16-17 23.09942326692861 28.083979162768713 26.061277478524325 22.75532009177835 18-19 23.155624633796876 27.33233436130072 27.55780880463094 21.954232200271463 20-21 23.662190972786405 26.479202876786296 27.445309384185883 22.41329676624142 22-23 23.444586576017578 26.20705977042961 27.296319383103018 23.052034270449795 24-25 23.367963918540983 26.482517298880005 27.179855831724897 22.96966295085411 26-27 23.24932059218692 26.634099296777215 27.19522006773234 22.92136004330353 28-29 23.27393434378582 26.834853651586915 27.050886783013578 22.840325221613686 30-31 23.55652527332406 26.57692764783399 26.966715232805583 22.899831846036367 32-33 23.38965166981942 26.621707422608797 26.890090603535498 23.098550304036287 34-35 23.54452636599971 26.67888760164917 27.000310885353557 22.77627514699756 36-37 23.56236041139004 26.62372491015778 26.95443748990629 22.85947718854589 38-39 23.505575135574812 26.62469025656883 26.926186445768597 22.943548162087765 40-41 23.594508287989242 26.563451963276542 26.912165959368895 22.929873789365324 42-43 23.511190669949837 26.526248890846855 26.83354545254597 23.129014986657335 44-45 23.480365814545983 26.571386458663998 26.83778017709027 23.110467549699745 46-47 23.651656604406604 26.582618809461362 26.650145541938958 23.11557904419308 48-49 23.423008778671186 26.75372349139056 26.60478055291742 23.218487177020833 50-51 23.52199874602388 26.729551490163512 26.60139644356615 23.147053320246464 52-53 23.7324031966555 26.65207911939008 26.505744092929636 23.109773591024783 54-55 23.430275898810514 26.535208438168713 26.7438451991388 23.290670463881977 56-57 23.450737422069086 26.716187044691768 26.58074351473006 23.252332018509083 58-59 23.49342475224025 26.621685990761595 26.648440662242134 23.236448594756016 60-61 23.541470934465742 26.662090554497425 26.69971052971945 23.096727981317382 62-63 23.521273710868737 26.636311764478 26.678006254830162 23.164408269823102 64-65 23.337605250550737 26.47455845089315 26.702076624600924 23.485759673955194 66-67 23.284070912405006 26.68018655075818 26.571661898258714 23.4640806385781 68-69 23.34071315836045 26.60496419367559 26.593045716062463 23.461276931901494 70-71 23.35862756984211 26.445360705576533 26.59280460629195 23.603207118289415 72-73 23.379996644470484 26.564991714600065 26.46301251034649 23.59199913058296 74-75 23.281402004693092 26.680167433143794 26.424434286036984 23.613996276126134 76-77 23.294439402923 26.424631959794766 26.59424862941176 23.686680007870475 78-79 23.221809959388313 26.425219186163385 26.65701849007569 23.69595236437261 80-81 23.29219401765009 26.60781770703846 26.43280127769547 23.66718699761598 82-83 23.282292378000736 26.59442795608552 26.50811577454431 23.61516389136944 84-85 23.274484128182866 26.613942296957767 26.4623756043295 23.64919797052987 86-87 23.186204748745403 26.591423664357865 26.411529025586038 23.810842561310693 88-89 23.10006766665877 26.455030634302517 26.50703127674084 23.937870422297873 90-91 23.112841901999566 26.474909788781602 26.48274708390055 23.929501225318283 92-93 23.05648815953292 26.442204589320177 26.637052499245467 23.864254751901434 94-95 22.995584533162287 26.333856037595314 26.681585129944587 23.988974299297812 96-97 22.901707352063028 26.26034123405092 26.69219372860229 24.145757685283762 98-99 22.78524516549196 26.272669142130862 26.599083780632554 24.343001911744626 100-101 22.748512116269442 26.212193178860183 26.65635080410223 24.382943900768144 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 36.0 1 27.5 2 34.5 3 51.5 4 43.5 5 43.5 6 84.0 7 234.0 8 371.5 9 398.0 10 346.5 11 292.0 12 292.0 13 293.5 14 322.5 15 376.5 16 433.5 17 492.0 18 557.0 19 620.5 20 733.5 21 883.5 22 1070.5 23 1362.5 24 1731.5 25 2241.5 26 2935.0 27 3901.5 28 5277.0 29 7172.0 30 9718.0 31 12775.5 32 16745.5 33 20343.5 34 23086.0 35 26595.0 36 31135.5 37 35867.0 38 40204.0 39 43698.0 40 46764.5 41 50526.0 42 53837.5 43 56846.0 44 60091.5 45 63158.5 46 65231.0 47 66283.0 48 67132.5 49 66927.5 50 65237.0 51 63508.0 52 61865.0 53 59667.5 54 57294.0 55 53585.0 56 48386.0 57 42565.5 58 37381.5 59 32650.5 60 26898.0 61 21538.0 62 17251.5 63 12764.0 64 8852.0 65 6377.0 66 4756.0 67 3556.0 68 2620.0 69 2013.0 70 1494.5 71 1020.5 72 711.5 73 519.5 74 390.5 75 280.0 76 183.5 77 106.0 78 70.0 79 38.5 80 17.0 81 8.5 82 7.0 83 4.5 84 3.0 85 3.0 86 1.5 87 1.5 88 1.0 89 1.5 90 1.5 91 0.5 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14692375917370815 2 5.908462165162525E-4 3 0.006105410904001277 4 0.004004624356387934 5 0.023633848660650103 6 0.001181692433032505 7 0.0 8 0.002232085706839176 9 0.0 10-11 0.10037820722815002 12-13 2.2977352864520932E-4 14-15 0.005186316789420439 16-17 2.625983184516678E-4 18-19 4.2672226748396015E-4 20-21 7.549701655485449E-4 22-23 1.6412394903229236E-4 24-25 0.001247342012645422 26-27 0.0024618592354843857 28-29 0.006105410904001277 30-31 0.0150994033109709 32-33 0.0150994033109709 34-35 0.011127603744389423 36-37 8.534445349679203E-4 38-39 1.6412394903229236E-4 40-41 0.0046611201525171035 42-43 0.007713825604517742 44-45 0.007713825604517742 46-47 0.009092466776388997 48-49 0.011324552483228174 50-51 0.005514564687485023 52-53 0.0014442907514841728 54-55 0.0011488676432260467 56-57 0.0062367100632271105 58-59 0.00922376593561483 60-61 0.007352752916646698 62-63 0.01680629238090674 64-65 0.03305456333510368 66-67 0.03568054651962036 68-69 0.025833109577682818 70-71 0.04109663683768601 72-73 0.02491401546310198 74-75 0.023797972609682395 76-77 0.23870187147256605 78-79 0.06676562246633654 80-81 0.05320898427626919 82-83 0.01831623271200383 84-85 0.03131484947536139 86-87 0.08120852998117827 88-89 0.26437085710121655 90-91 0.31892565775955056 92-93 0.05051735151213959 94-95 0.004628295362710645 96-97 0.009814612152131084 98-99 0.0015099403310970898 100-101 0.0012145172228389637 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1523239.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.13340449448633 #Duplication Level Percentage of deduplicated Percentage of total 1 83.7777916994425 58.7562175291182 2 9.583121596452289 13.44193886487672 3 2.7810600469919033 5.851356275974149 4 1.2573939078759444 3.52741262199866 5 0.7115767068071933 2.49526485036817 6 0.4621487938743729 1.944724097845823 7 0.3019692722915328 1.4824693182969428 8 0.22633084544637574 1.269868218661579 9 0.15983670646903042 1.008890314907309 >10 0.7108765331457223 8.214399273240659 >50 0.021419590584275887 1.0028367143072288 >100 0.006192835016990679 0.7965608352728282 >500 1.8764373455242494E-4 0.12403388534888518 >1k 9.382186727621247E-5 0.08402719978277261 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 6.564957961291694E-5 3 0.0 0.0 0.0 0.0 6.564957961291694E-5 4 0.0 0.0 0.0 0.0 6.564957961291694E-5 5 0.0 0.0 0.0 0.0 1.3129915922583388E-4 6 0.0 0.0 0.0 0.0 1.3129915922583388E-4 7 0.0 0.0 0.0 0.0 1.3129915922583388E-4 8 0.0 0.0 0.0 0.0 1.3129915922583388E-4 9 0.0 0.0 0.0 0.0 1.3129915922583388E-4 10-11 0.0 0.0 0.0 1.3129915922583388E-4 1.3129915922583388E-4 12-13 0.0 0.0 0.0 1.3129915922583388E-4 1.3129915922583388E-4 14-15 0.0 0.0 0.0 1.3129915922583388E-4 2.2977352864520932E-4 16-17 3.282478980645847E-5 0.0 0.0 1.9694873883875085E-4 2.6259831845166777E-4 18-19 6.564957961291694E-5 0.0 0.0 1.9694873883875085E-4 2.6259831845166777E-4 20-21 6.564957961291694E-5 0.0 0.0 2.6259831845166777E-4 2.9542310825812627E-4 22-23 6.564957961291694E-5 0.0 0.0 2.6259831845166777E-4 3.938974776775017E-4 24-25 9.847436941937541E-5 0.0 0.0 3.6107268787104326E-4 3.938974776775017E-4 26-27 1.3129915922583388E-4 0.0 0.0 5.251966369033355E-4 3.938974776775017E-4 28-29 1.3129915922583388E-4 0.0 0.0 0.001181692433032505 3.938974776775017E-4 30-31 1.3129915922583388E-4 0.0 0.0 0.004792419311742938 4.5954705729041865E-4 32-33 1.3129915922583388E-4 0.0 0.0 0.013195565502196306 5.908462165162525E-4 34-35 1.3129915922583388E-4 0.0 0.0 0.023601023870843646 5.908462165162525E-4 36-37 1.3129915922583388E-4 0.0 0.0 0.04004624356387934 5.908462165162525E-4 38-39 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.07044199892465988 5.908462165162525E-4 40-41 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.10589277191563504 5.908462165162525E-4 42-43 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.1444947247280302 5.908462165162525E-4 44-45 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.18979293466094288 6.23671006322711E-4 46-47 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.24142632902650207 7.221453757420864E-4 48-49 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.29854146328973985 7.221453757420864E-4 50-51 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.36153223492833364 7.221453757420864E-4 52-53 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.42409628429944346 8.206197451614619E-4 54-55 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.49266727020513523 8.534445349679203E-4 56-57 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.5784384459694112 8.534445349679203E-4 58-59 1.3129915922583388E-4 6.564957961291694E-5 0.0 0.6724486439751083 8.534445349679203E-4 60-61 1.3129915922583388E-4 1.3129915922583388E-4 0.0 0.7700039192799029 8.534445349679203E-4 62-63 1.9694873883875085E-4 1.3129915922583388E-4 0.0 0.8759295159853444 8.534445349679203E-4 64-65 1.9694873883875085E-4 1.3129915922583388E-4 0.0 0.9909147546773684 8.534445349679203E-4 66-67 2.2977352864520932E-4 1.3129915922583388E-4 0.0 1.1226078113808797 8.534445349679203E-4 68-69 3.2824789806458476E-4 1.3129915922583388E-4 0.0 1.2645422025040063 8.534445349679203E-4 70-71 3.2824789806458476E-4 1.3129915922583388E-4 0.0 1.4223966166832651 8.534445349679203E-4 72-73 3.2824789806458476E-4 1.3129915922583388E-4 0.0 1.587341185460719 9.190941145808373E-4 74-75 3.2824789806458476E-4 1.3129915922583388E-4 0.0 1.767549281498176 9.190941145808373E-4 76-77 3.2824789806458476E-4 1.3129915922583388E-4 0.0 1.9660736102476366 9.190941145808373E-4 78-79 3.2824789806458476E-4 1.3129915922583388E-4 0.0 2.195124993517104 9.190941145808373E-4 80-81 3.2824789806458476E-4 1.3129915922583388E-4 0.0 2.4387177586708324 9.847436941937543E-4 82-83 3.2824789806458476E-4 1.3129915922583388E-4 0.0 2.6958999868044344 0.001116042853419588 84-85 3.2824789806458476E-4 1.3129915922583388E-4 0.0 2.967131224975201 0.001116042853419588 86-87 3.2824789806458476E-4 1.3129915922583388E-4 0.0 3.2642940470930695 0.001116042853419588 88-89 3.2824789806458476E-4 1.3129915922583388E-4 0.0 3.5971702405203647 0.001116042853419588 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1390 0.0 50.27283 1 GTATCAA 2370 0.0 40.11552 1 TCAACGC 2985 0.0 30.998167 4 CAACGCA 3020 0.0 30.223125 5 ATCAACG 3155 0.0 29.3279 3 TATCAAC 3200 0.0 28.916428 2 AACGCAG 3290 0.0 27.740984 6 GTACATG 3750 0.0 25.86007 1 TACATGG 3885 0.0 24.428621 2 ACGCAGA 3830 0.0 23.581495 7 CGCAGAG 3850 0.0 22.841652 8 ACATGGG 4140 0.0 21.777046 3 CATGGGG 3560 0.0 20.393284 4 GTATATA 600 0.0 19.807041 1 AGAGTAC 3835 0.0 19.274431 10-11 GCAGAGT 4670 0.0 18.22018 9 ACCGTGC 345 1.0732037E-9 17.911863 8 GAGTACT 2455 0.0 17.681355 12-13 CAGAGTA 4255 0.0 17.539476 9 TCTATAC 460 0.0 17.536255 3 >>END_MODULE