##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921390_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2188835 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.492522734696767 31.0 31.0 34.0 26.0 34.0 2 30.560767257468015 31.0 31.0 34.0 26.0 34.0 3 30.60219568857406 33.0 31.0 34.0 26.0 34.0 4 34.080485280982806 37.0 35.0 37.0 30.0 37.0 5 34.0810513355278 37.0 35.0 37.0 30.0 37.0 6 34.13251204407824 37.0 35.0 37.0 30.0 37.0 7 34.05090105010199 37.0 35.0 37.0 30.0 37.0 8 34.0184449718686 37.0 35.0 37.0 30.0 37.0 9 35.58337380387284 39.0 37.0 39.0 30.0 39.0 10-11 35.485217021840384 39.0 36.0 39.0 30.0 39.0 12-13 35.37974173475844 39.0 35.0 39.0 30.0 39.0 14-15 36.51985919450301 40.0 37.0 41.0 29.0 41.0 16-17 36.47425000057108 40.0 37.0 41.0 29.0 41.0 18-19 36.445300810705234 40.0 37.0 41.0 29.0 41.0 20-21 36.390509334874494 40.0 37.0 41.0 28.5 41.0 22-23 36.27177631022896 40.0 36.5 41.0 28.0 41.0 24-25 36.1804724887897 40.0 36.0 41.0 27.0 41.0 26-27 36.032485774395965 40.0 36.0 41.0 27.0 41.0 28-29 35.88432682225933 40.0 36.0 41.0 27.0 41.0 30-31 35.72155096204145 40.0 36.0 41.0 27.0 41.0 32-33 35.5275404495999 39.0 35.0 41.0 26.0 41.0 34-35 35.34844974609781 39.0 35.0 41.0 25.0 41.0 36-37 35.16713091667485 39.0 35.0 41.0 25.0 41.0 38-39 35.36633643011008 39.5 35.0 41.0 25.0 41.0 40-41 35.46886288824877 40.0 35.0 41.0 25.0 41.0 42-43 35.282027653980315 40.0 35.0 41.0 24.0 41.0 44-45 35.14387311058166 40.0 35.0 41.0 24.0 41.0 46-47 34.96895083457638 40.0 35.0 41.0 23.0 41.0 48-49 34.81345715871686 39.5 35.0 41.0 22.0 41.0 50-51 33.08933953450123 37.0 32.5 39.5 18.0 40.0 52-53 33.24668396658497 37.5 33.0 39.5 17.0 40.0 54-55 34.12158728273259 39.0 34.0 40.5 18.5 41.0 56-57 34.14460797638927 39.0 34.0 41.0 18.0 41.0 58-59 33.9728362348007 38.5 34.0 41.0 17.5 41.0 60-61 33.73567765500826 38.0 34.0 40.5 14.0 41.0 62-63 33.457189783606346 37.5 34.0 40.0 12.5 41.0 64-65 33.169025531846856 37.0 33.0 40.0 9.5 41.0 66-67 32.82777276496401 36.5 33.0 40.0 7.5 41.0 68-69 32.465731542121716 36.0 33.0 39.0 4.5 41.0 70-71 32.08200526764237 35.5 32.0 39.0 2.0 41.0 72-73 31.716858739923293 35.0 32.0 38.5 2.0 40.0 74-75 31.30605915932448 35.0 32.0 37.0 2.0 39.5 76-77 30.917449236694406 35.0 31.5 37.0 2.0 39.0 78-79 30.54794742408633 35.0 31.0 36.0 2.0 39.0 80-81 30.1753962724463 35.0 31.0 36.0 2.0 37.5 82-83 29.84606720013158 35.0 31.0 35.5 2.0 37.0 84-85 29.584322938914994 35.0 31.0 35.0 2.0 37.0 86-87 29.335348027603725 35.0 30.5 35.0 2.0 36.0 88-89 29.10904088247858 35.0 30.0 35.0 2.0 36.0 90-91 28.83375128778551 34.0 30.0 35.0 2.0 36.0 92-93 28.624989092371056 34.0 30.0 35.0 2.0 35.0 94-95 28.400853193593854 34.0 30.0 35.0 2.0 35.0 96-97 28.130415038136725 34.0 29.0 35.0 2.0 35.0 98-99 27.874477518862776 34.0 29.0 35.0 2.0 35.0 100-101 26.80757115086336 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65944.0 3 11644.0 4 7904.0 5 6360.0 6 5857.0 7 6146.0 8 6553.0 9 7111.0 10 7975.0 11 8720.0 12 9104.0 13 9363.0 14 10544.0 15 11294.0 16 12230.0 17 12809.0 18 11711.0 19 10081.0 20 10288.0 21 10657.0 22 11578.0 23 12920.0 24 15134.0 25 17570.0 26 20822.0 27 24413.0 28 28628.0 29 33571.0 30 39789.0 31 48355.0 32 59023.0 33 76309.0 34 103678.0 35 150618.0 36 247449.0 37 447792.0 38 505989.0 39 102883.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.77518684644881 19.045653566046354 13.407463984835625 24.771695602669215 2 16.086330856323688 20.09554833094409 39.016467481934406 24.801653330797812 3 19.084053206714238 23.340306951967964 30.165250536048365 27.410389305269433 4 13.442365016609367 16.116731371658986 36.71833466583105 33.72256894590059 5 14.157653832195361 36.64973036914608 34.913424682078755 14.279191116579806 6 33.159249720802116 35.468686883457046 17.084534356419177 14.287529039321663 7 28.179641484690215 32.02387969677446 21.30753448756437 18.488944330970952 8 25.78450838418988 34.834224036886326 20.34647187714917 19.03479570177463 9 25.925252324926234 15.860130171192985 20.297402288209057 37.917215215671725 10-11 24.893458249708456 25.533234262986078 28.57553474225259 20.99777274505288 12-13 25.486933495170366 23.225792594356253 28.05033064704271 23.236943263430675 14-15 22.783861269721196 25.21906855726589 25.49513961813979 26.50193055487312 16-17 22.646367818707862 28.016436317837055 26.61208763537935 22.725108228075733 18-19 22.61568670818398 27.236391868845743 28.056882801632664 22.091038621337606 20-21 23.074929885902645 26.556551240986394 28.07826821721226 22.290250655898703 22-23 22.99262474411946 26.448351840225868 27.64359991836505 22.915423497289613 24-25 22.804547823978524 26.575692209459877 27.75307503278824 22.86668493377336 26-27 22.698660897395033 26.727531020003475 27.74220349707252 22.83160458552897 28-29 22.806985877494675 26.91732013517722 27.666547933831616 22.60914605349649 30-31 23.10780901171265 26.562204430830306 27.42450106781859 22.90548548963846 32-33 22.79297857967405 26.711840725233944 27.31148100503257 23.183699690059445 34-35 23.2549506166268 26.69987295772286 27.284664939415613 22.760511486234726 36-37 23.217630247351696 26.478859597684856 27.397510926616857 22.90599922834659 38-39 22.950640286415545 26.652321826392555 27.4333305310713 22.963707356120597 40-41 23.217427576606127 26.531882649590337 27.40872575854559 22.841964015257947 42-43 23.187177093173457 26.53931799147661 27.1277908559701 23.145714059379827 44-45 23.10865252629432 26.573384796982495 27.222013550751456 23.095949125971725 46-47 23.218489364682746 26.604339279027034 26.950143888778506 23.227027467511718 48-49 23.031884917828204 26.68357301155885 26.946232512828544 23.338309557784402 50-51 23.099727891654734 26.77758530395198 27.00808084877295 23.114605955620338 52-53 23.266107194049955 26.630359393476873 26.96318623790756 23.14034717456562 54-55 22.987502002884153 26.567468583331426 27.146748460640463 23.29828095314396 56-57 22.955467246063215 26.697446536039944 27.04568883044661 23.30139738745023 58-59 22.959704222782452 26.54323997470025 27.159022832724762 23.338032969792533 60-61 22.897589081638632 26.543269794291742 27.29601788225986 23.26312324180976 62-63 22.932087015464436 26.573450746414895 27.237350344448995 23.257111893671674 64-65 22.79784692253825 26.49151526958452 27.126138811824113 23.584498996053117 66-67 22.736318521841838 26.494662003168006 27.02328849904319 23.74573097594697 68-69 22.869862468102873 26.332537679125203 27.16438087756356 23.63321897520837 70-71 22.747630068995253 26.190572639778498 27.156373449998412 23.90542384122784 72-73 22.766135339350868 26.22294049535364 27.13424508041778 23.876679084877715 74-75 22.73427956788424 26.40072673889653 27.07850826267244 23.78648543054679 76-77 22.7085215834155 26.183629543979336 27.113253080435086 23.994595792170077 78-79 22.624132423180377 26.194392609803398 27.150859066170614 24.030615900845618 80-81 22.691893287884692 26.132961086737822 27.133782111191344 24.04136351418614 82-83 22.65101662248626 26.187456184012724 27.153525724534983 24.008001468966032 84-85 22.67717653092061 26.16127437064442 27.16753358547239 23.994015512962573 86-87 22.64270316834213 26.14623018898859 27.076541133766664 24.13452550890262 88-89 22.479716673417663 25.966916991603657 27.168792676959473 24.38457365801921 90-91 22.46578046281841 25.934605867959686 27.20293494154892 24.39667872767298 92-93 22.5359601403852 25.710884982277822 27.386975464647584 24.366179412689394 94-95 22.443343621203624 25.572277575091647 27.4303461867971 24.554032616907634 96-97 22.441801322161652 25.36956930470749 27.49637764714585 24.69225172598501 98-99 22.35639100774512 25.378989800180257 27.35467821473845 24.909940977336177 100-101 22.45485525950282 25.131948161038704 27.53581270151193 24.87738387794655 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 187.0 1 133.5 2 122.5 3 172.5 4 165.5 5 186.5 6 282.0 7 535.5 8 789.0 9 868.5 10 776.5 11 638.5 12 670.0 13 734.5 14 809.0 15 937.5 16 1006.5 17 1114.5 18 1243.0 19 1409.5 20 1630.5 21 1815.5 22 2097.5 23 2452.5 24 2920.5 25 3774.5 26 5017.5 27 6626.0 28 8999.0 29 12296.5 30 16427.5 31 21785.5 32 28301.5 33 32961.0 34 36116.0 35 40584.0 36 46406.0 37 52457.5 38 57936.0 39 62731.0 40 67012.0 41 71210.5 42 75316.5 43 79001.5 44 82653.5 45 87185.0 46 90111.0 47 91495.5 48 92635.0 49 92565.5 50 90450.5 51 87777.5 52 85699.0 53 83841.0 54 80899.5 55 75714.0 56 69147.0 57 61037.0 58 54306.5 59 47647.5 60 39040.5 61 31592.5 62 25754.5 63 19470.0 64 13503.5 65 9762.0 66 7275.5 67 5402.5 68 3955.0 69 2914.0 70 2207.0 71 1642.5 72 1201.0 73 903.5 74 669.5 75 474.5 76 338.0 77 217.5 78 156.5 79 117.5 80 75.0 81 49.5 82 43.5 83 47.5 84 46.0 85 42.0 86 36.0 87 27.5 88 24.5 89 21.0 90 16.5 91 16.5 92 13.0 93 7.5 94 5.0 95 7.5 96 9.5 97 6.5 98 4.0 99 4.0 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04915857065516588 2 0.05715369134722352 3 0.048701706615619726 4 0.055463294400902766 5 0.047011309669298965 6 0.019325348872802198 7 0.016675537443434522 8 0.022386337937761413 9 0.022203592321942953 10-11 0.02243202434171603 12-13 0.02857684567361176 14-15 0.045343755924955514 16-17 0.028873807299316757 18-19 0.02334575242080833 20-21 0.02814282483604292 22-23 0.047810821738504726 24-25 0.042556885283723984 26-27 0.03154646193066175 28-29 0.020490352173644883 30-31 0.011924151432154547 32-33 0.008657573549399568 34-35 0.008840319165218026 36-37 0.0013020625127065312 38-39 0.005802173302236121 40-41 0.003380793892641519 42-43 0.22669593642280025 44-45 0.2001292925231916 46-47 0.20599999543135958 48-49 0.20321312479012807 50-51 0.20152272784380731 52-53 0.20631980025904192 54-55 0.20490352173644882 56-57 0.21579972907962455 58-59 0.21123108868416307 60-61 0.21796983326746877 62-63 0.21447482336494073 64-65 0.21497737380844145 66-67 0.205360385775995 68-69 0.20417253927317502 70-71 0.18820514109103703 72-73 0.19528653370400234 74-75 0.19560633853168466 76-77 0.19375603917152276 78-79 0.2195917006078576 80-81 0.2274269188860741 82-83 0.22779241011771104 84-85 0.22180749119965643 86-87 0.24049323041709403 88-89 0.23786626218970366 90-91 0.2382089102193633 92-93 0.24083587844675364 94-95 0.25216610662749817 96-97 0.25202904741563437 98-99 0.24063028962895786 100-101 0.251115319336542 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2188835.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.13186550328611 #Duplication Level Percentage of deduplicated Percentage of total 1 79.77031404304398 51.158190513633926 2 11.629932959889066 14.916985927916796 3 3.6556420539144248 7.0332943358938955 4 1.61769524315831 4.149832550381379 5 0.9162054334959023 2.9378981817169576 6 0.5837763521141243 2.2463199898669206 7 0.3734881273934082 1.676674324714777 8 0.26856248599758425 1.3778730584980188 9 0.20565910627511544 1.1870371928845558 >10 0.9385047127788969 10.099074043871525 >50 0.029417547508867055 1.2659059790837468 >100 0.009444421209414789 1.1668711731376527 >500 0.0010717209637911636 0.49972356939565427 >1k 2.8579225701090934E-4 0.2843191590041716 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.568640395461513E-5 2 0.0 0.0 0.0 4.568640395461513E-5 4.568640395461513E-5 3 0.0 0.0 0.0 4.568640395461513E-5 4.568640395461513E-5 4 0.0 0.0 0.0 4.568640395461513E-5 4.568640395461513E-5 5 0.0 0.0 0.0 4.568640395461513E-5 4.568640395461513E-5 6 0.0 0.0 0.0 4.568640395461513E-5 9.137280790923026E-5 7 0.0 0.0 0.0 4.568640395461513E-5 9.137280790923026E-5 8 0.0 0.0 0.0 4.568640395461513E-5 9.137280790923026E-5 9 0.0 0.0 0.0 4.568640395461513E-5 9.137280790923026E-5 10-11 0.0 0.0 0.0 9.137280790923026E-5 9.137280790923026E-5 12-13 0.0 0.0 0.0 9.137280790923026E-5 1.1421600988653782E-4 14-15 0.0 0.0 0.0 9.137280790923026E-5 1.8274561581846052E-4 16-17 0.0 0.0 0.0 1.5990241384115293E-4 2.2843201977307563E-4 18-19 0.0 0.0 0.0 2.2843201977307563E-4 2.2843201977307563E-4 20-21 0.0 0.0 0.0 2.2843201977307563E-4 2.5127522175038316E-4 22-23 0.0 0.0 0.0 5.025504435007664E-4 3.6549123163692103E-4 24-25 0.0 0.0 0.0 7.766688672284571E-4 4.1117763559153615E-4 26-27 0.0 0.0 0.0 0.0014848081285249917 4.5686403954615126E-4 28-29 0.0 0.0 0.0 0.0049112884251211264 5.025504435007664E-4 30-31 0.0 0.0 0.0 0.018502993601619125 5.25393645478074E-4 32-33 0.0 0.0 0.0 0.04945553228087087 5.482368474553815E-4 34-35 0.0 0.0 0.0 0.09482213140780368 5.482368474553815E-4 36-37 0.0 0.0 0.0 0.16170702679736024 5.482368474553815E-4 38-39 0.0 0.0 0.0 0.2508640441147917 5.939232514099967E-4 40-41 0.0 0.0 0.0 0.34813039813416724 5.939232514099967E-4 42-43 0.0 0.0 0.0 0.4590569869359728 5.939232514099967E-4 44-45 0.0 0.0 0.0 0.6137511507262996 5.939232514099967E-4 46-47 0.0 0.0 0.0 0.790397631616819 6.167664533873042E-4 48-49 0.0 0.0 0.0 0.9570387900412777 7.081392612965345E-4 50-51 0.0 0.0 0.0 1.1209616074304367 7.309824632738421E-4 52-53 0.0 0.0 0.0 1.3016284918689622 7.766688672284571E-4 54-55 2.2843201977307564E-5 0.0 0.0 1.5238471607042103 7.766688672284571E-4 56-57 4.568640395461513E-5 0.0 0.0 1.7867952586649976 7.766688672284571E-4 58-59 4.568640395461513E-5 0.0 0.0 2.053443955346109 7.766688672284571E-4 60-61 4.568640395461513E-5 0.0 0.0 2.318607843898695 7.766688672284571E-4 62-63 4.568640395461513E-5 0.0 0.0 2.5955359814695944 7.766688672284571E-4 64-65 4.568640395461513E-5 0.0 0.0 2.9245237763467777 7.766688672284571E-4 66-67 4.568640395461513E-5 0.0 0.0 3.3230919644468404 7.766688672284571E-4 68-69 4.568640395461513E-5 0.0 0.0 3.7482267964465117 7.766688672284571E-4 70-71 4.568640395461513E-5 0.0 0.0 4.174229670121321 8.223552711830723E-4 72-73 4.568640395461513E-5 0.0 0.0 4.61167698798676 8.680416751376874E-4 74-75 4.568640395461513E-5 0.0 0.0 5.094216786555405 8.680416751376874E-4 76-77 4.568640395461513E-5 0.0 0.0 5.659974369927381 8.680416751376874E-4 78-79 4.568640395461513E-5 0.0 0.0 6.275461604003956 8.680416751376874E-4 80-81 4.568640395461513E-5 0.0 0.0 6.903032891926527 8.680416751376874E-4 82-83 4.568640395461513E-5 0.0 0.0 7.528479762065208 9.594144830469177E-4 84-85 4.568640395461513E-5 0.0 0.0 8.202491279607646 9.594144830469177E-4 86-87 4.568640395461513E-5 0.0 0.0 8.963763828703396 0.0010279440889788404 88-89 4.568640395461513E-5 0.0 0.0 9.783948995698625 0.001050787290956148 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2160 0.0 47.011425 1 GTATCAA 3830 0.0 42.618977 1 TCAACGC 4505 0.0 35.81355 4 CAACGCA 4615 0.0 34.853115 5 TATCAAC 4685 0.0 34.337074 2 ATCAACG 4755 0.0 33.92828 3 AACGCAG 4880 0.0 32.75853 6 ACGCAGA 5620 0.0 28.364613 7 CGCAGAG 5715 0.0 27.065432 8 GTACATG 3860 0.0 22.864885 1 GCAGAGT 6410 0.0 22.575922 9 CGTATAC 135 3.8247238E-4 21.088753 3 GTGGTAT 1140 0.0 20.395512 1 TACATGG 4250 0.0 20.321493 2 ACATGGG 4405 0.0 19.82008 3 GAGTACT 4070 0.0 19.469088 12-13 AGAGTAC 5510 0.0 19.332067 10-11 CAGAGTA 5910 0.0 19.308174 10-11 GTATATA 805 0.0 18.862421 1 GTACTTT 4290 0.0 18.35944 14-15 >>END_MODULE