##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921390_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2188835 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.506850447840975 33.0 31.0 34.0 30.0 34.0 2 31.636136118071942 34.0 31.0 34.0 30.0 34.0 3 31.71088090239785 34.0 31.0 34.0 29.0 34.0 4 35.214661223893074 37.0 35.0 37.0 33.0 37.0 5 34.96803733492931 37.0 35.0 37.0 32.0 37.0 6 34.92872327059828 37.0 35.0 37.0 32.0 37.0 7 34.79636336224521 37.0 35.0 37.0 32.0 37.0 8 34.76611850596322 37.0 35.0 37.0 32.0 37.0 9 36.39424259937364 39.0 37.0 39.0 32.0 39.0 10-11 36.250958614970976 39.0 37.0 39.0 32.0 39.0 12-13 36.19779540257717 39.0 37.0 39.0 32.0 39.0 14-15 37.44528344987174 40.0 38.0 41.0 32.0 41.0 16-17 37.430180895316454 40.0 38.0 41.0 32.0 41.0 18-19 37.40925309582495 40.0 38.0 41.0 32.0 41.0 20-21 37.37329903807276 40.0 38.0 41.0 32.0 41.0 22-23 37.26062974139211 40.0 38.0 41.0 31.0 41.0 24-25 37.20041094920357 40.0 38.0 41.0 31.0 41.0 26-27 37.06469263329579 40.0 37.0 41.0 31.0 41.0 28-29 36.9069073274139 40.0 37.0 41.0 30.0 41.0 30-31 36.75273079058038 40.0 37.0 41.0 30.0 41.0 32-33 36.67633010254313 40.0 37.0 41.0 30.0 41.0 34-35 36.784530126756934 40.0 37.0 41.0 30.0 41.0 36-37 36.73802159596315 40.0 37.0 41.0 30.0 41.0 38-39 36.640113804832254 40.0 37.0 41.0 30.0 41.0 40-41 36.50271080277865 40.0 37.0 41.0 30.0 41.0 42-43 36.37735553387989 40.0 36.5 41.0 29.5 41.0 44-45 36.22031011931004 40.0 36.0 41.0 29.0 41.0 46-47 36.04423152042068 40.0 36.0 41.0 28.0 41.0 48-49 35.867801364652884 40.0 36.0 41.0 27.5 41.0 50-51 35.708079640539374 40.0 35.0 41.0 27.0 41.0 52-53 35.5404644479826 39.0 35.0 41.0 27.0 41.0 54-55 35.33498938933268 39.0 35.0 41.0 26.0 41.0 56-57 35.06816594215644 39.0 35.0 41.0 26.0 41.0 58-59 34.85003369372292 39.0 35.0 41.0 26.0 41.0 60-61 34.5875150479593 38.0 34.5 40.0 25.0 41.0 62-63 34.30403525162929 38.0 34.0 40.0 24.5 41.0 64-65 33.99188381033746 37.0 34.0 40.0 23.5 41.0 66-67 33.65747372460693 37.0 34.0 39.5 23.0 41.0 68-69 33.295334504428155 36.0 34.0 39.0 22.0 41.0 70-71 32.91743758666139 35.5 33.0 39.0 22.0 40.5 72-73 32.5176744706659 35.0 33.0 38.0 20.5 40.0 74-75 32.1052772365208 35.0 33.0 37.0 19.5 39.5 76-77 29.302931239677726 33.0 29.0 34.5 12.0 36.5 78-79 30.963056831602202 34.5 31.5 36.0 15.0 38.0 80-81 31.151770005505213 35.0 32.0 36.0 17.0 37.0 82-83 30.972191599640905 35.0 32.0 35.5 13.5 37.0 84-85 30.727044523684974 35.0 32.0 35.0 9.5 37.0 86-87 30.468029568240638 35.0 32.0 35.0 7.0 36.0 88-89 30.170799991776448 35.0 31.5 35.0 2.0 36.0 90-91 29.975997048658304 34.5 31.0 35.0 2.0 35.5 92-93 29.825566568517043 34.0 31.0 35.0 2.0 35.0 94-95 29.727016654978563 34.0 31.0 35.0 2.0 35.0 96-97 29.53007832933958 34.0 31.0 35.0 2.0 35.0 98-99 29.256590377986463 34.0 31.0 35.0 2.0 35.0 100-101 28.1652299054063 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 34073.0 3 11960.0 4 6669.0 5 4720.0 6 4277.0 7 4459.0 8 4780.0 9 5151.0 10 5879.0 11 6670.0 12 7192.0 13 8130.0 14 9074.0 15 10338.0 16 11476.0 17 12827.0 18 11494.0 19 9598.0 20 9012.0 21 8364.0 22 8854.0 23 10065.0 24 11627.0 25 13681.0 26 16530.0 27 19902.0 28 23733.0 29 28564.0 30 34718.0 31 42628.0 32 54185.0 33 70863.0 34 99717.0 35 148612.0 36 256487.0 37 502200.0 38 575053.0 39 85270.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.3254185106088 20.392997054421137 13.896890554150465 25.384693880819597 2 15.300650304136198 21.469904816380684 37.60721520525653 25.622229674226592 3 17.820953895216817 24.411000086809125 30.042764916320575 27.725281101653486 4 13.19062439462998 17.28452482336902 35.7560774581221 33.7687733238789 5 13.927350780832642 37.14408056516627 34.82984735227975 14.098721301721337 6 33.12857873198955 36.08883227742703 16.75041883699691 14.03217015358651 7 28.07024196444317 32.26882440605364 21.278498049646526 18.382435579856672 8 25.840285455824706 35.321686053417885 20.09489304544084 18.743135445316568 9 25.8266612147558 15.860537683288142 20.220025721445424 38.09277538051064 10-11 24.953429436620812 25.84754309120604 28.405139432701247 20.7938880394719 12-13 25.468989461714337 23.45528669788428 28.042146746535874 23.03357709386551 14-15 22.674779202284085 25.417831450147727 25.48124775695655 26.426141590611646 16-17 22.623672292353582 28.360529762717874 26.484229695421618 22.53156824950693 18-19 22.554970741131022 27.419844496369855 28.13203074619767 21.89315401630145 20-21 23.056010774799653 26.60197705512262 28.174131983072087 22.16788018700564 22-23 22.934621936234898 26.49293766694132 27.756489138834645 22.81595125798914 24-25 22.782423404271846 26.682853640607146 27.845661338168863 22.689061616952145 26-27 22.628092388390527 26.874998715038483 27.850701406239043 22.64620749033195 28-29 22.766849941198025 27.040136117205538 27.736941803863658 22.456072137732775 30-31 23.078032014446347 26.690052419177963 27.479104523987075 22.75281104238862 32-33 22.753009409824624 26.793131675630526 27.394865137727237 23.058993776817612 34-35 23.23222607840212 26.79773667548453 27.37092427156696 22.599112974546394 36-37 23.189001379738855 26.62907411299239 27.42651291563491 22.755411591633848 38-39 22.966152724375373 26.713722204353736 27.529522594698907 22.79060247657198 40-41 23.19823843291987 26.652222998419635 27.437608881485314 22.711929687175182 42-43 23.203625098806103 26.61781571119833 27.120870133371106 23.057689056624465 44-45 23.095605085224737 26.69605915415156 27.16646231737353 23.04187344325018 46-47 23.19214215220411 26.791295050807808 26.94611722348125 23.070445573506834 48-49 22.983016741551037 26.838592678001632 26.997324541092887 23.181066039354445 50-51 23.089169464541857 26.921852987221495 26.953218430270372 23.035759117966276 52-53 23.31203556278426 26.750669886079393 26.815728216995115 23.12156633414123 54-55 22.941718262293403 26.708138098405716 26.98648493066571 23.36365870863517 56-57 22.95680866554318 26.84943605024776 26.904079997642448 23.289675286566613 58-59 22.949112620696035 26.671639387144563 26.980877110217342 23.398370881942057 60-61 22.873314626185635 26.679708212358644 27.14536129978048 23.30161586167524 62-63 22.892816817162615 26.676303707999015 27.08145698904832 23.349422485790047 64-65 22.76400024222564 26.574849437339537 26.937799425742416 23.723350894692402 66-67 22.710263608619297 26.698750798389852 26.847745484169888 23.743240108820967 68-69 22.787207614632614 26.618996000380218 26.866344515695033 23.727451869292132 70-71 22.733290324084514 26.460240554705045 26.868439918341846 23.938029202868595 72-73 22.783523905317384 26.48972666123459 26.785307075970287 23.941442357477733 74-75 22.680703049972685 26.650742334511058 26.725596139956508 23.942958475559752 76-77 22.69711094327732 26.38951037773138 26.873348029222623 24.040030649768685 78-79 22.569336891855592 26.463769938106857 26.880231342046763 24.08666182799079 80-81 22.697810575328226 26.448057132160635 26.746256621608 24.10787567090314 82-83 22.59739796843948 26.491237530085222 26.811293535316516 24.100070966158786 84-85 22.555047758329145 26.47820026507015 26.784287738220375 24.18246423838033 86-87 22.519481006418832 26.497392320628876 26.71065229935775 24.272474373594537 88-89 22.333947707708663 26.351736239392075 26.765597203271952 24.54871884962731 90-91 22.253461863014227 26.25934992925245 26.815567302760552 24.671620904972773 92-93 22.2918862236923 26.153301486279645 26.946346605376974 24.608465684651087 94-95 22.218607744176584 26.016223574554814 26.959625188779697 24.805543492488905 96-97 22.11129611065369 25.886208223178897 26.97702269128034 25.025472974887077 98-99 22.012449744152047 25.919750548245613 26.876256396198826 25.191543311403507 100-101 21.89651930997035 25.914420406208045 26.93454349166406 25.254516792157546 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 178.0 1 133.0 2 111.0 3 144.5 4 138.5 5 150.5 6 241.5 7 475.0 8 706.5 9 743.5 10 641.0 11 528.0 12 494.5 13 501.5 14 564.0 15 659.5 16 744.0 17 831.5 18 947.0 19 1069.5 20 1239.5 21 1517.0 22 1790.5 23 2178.5 24 2720.5 25 3523.0 26 4777.0 27 6638.5 28 9139.5 29 12643.0 30 16930.0 31 22022.0 32 28724.5 33 33631.0 34 36631.0 35 41016.0 36 46935.5 37 52923.5 38 58096.0 39 62782.0 40 67364.0 41 71647.5 42 75867.0 43 80095.0 44 83563.5 45 88050.0 46 91243.0 47 92242.5 48 93554.0 49 93693.5 50 91610.5 51 88803.5 52 86181.5 53 84127.0 54 81113.5 55 75599.5 56 68540.0 57 60702.5 58 53954.0 59 46552.0 60 37803.0 61 30697.5 62 25033.5 63 18595.5 64 12659.5 65 9030.5 66 6711.0 67 5048.5 68 3652.5 69 2641.0 70 1972.5 71 1439.5 72 1000.0 73 740.5 74 553.5 75 378.0 76 243.5 77 136.0 78 81.0 79 51.0 80 28.5 81 19.5 82 13.5 83 5.5 84 4.0 85 4.0 86 4.0 87 2.5 88 2.0 89 1.0 90 1.0 91 1.5 92 1.0 93 0.5 94 0.5 95 1.0 96 1.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16109026034397295 2 5.939232514099967E-4 3 0.0057108004943268904 4 0.004157462759869977 5 0.027137723949041383 6 0.0016447105423661446 7 4.568640395461512E-5 8 0.002512752217503832 9 0.0 10-11 0.1081854045645286 12-13 2.9696162570499833E-4 14-15 0.005642270888394968 16-17 2.741184237276908E-4 18-19 5.25393645478074E-4 20-21 0.0010964736949107632 22-23 2.0558881779576807E-4 24-25 0.0017360833502753747 26-27 0.0024442226115719092 28-29 0.006076291725963812 30-31 0.014756708477340686 32-33 0.014825238083272609 34-35 0.012997781925088003 36-37 6.852960593192269E-4 38-39 1.370592118638454E-4 40-41 0.004660013203370743 42-43 0.0093657128106961 44-45 0.008246395913808031 46-47 0.00890884877114995 48-49 0.010896207343175706 50-51 0.005505211676531123 52-53 0.0013705921186384538 54-55 8.680416751376874E-4 56-57 0.005505211676531123 58-59 0.010393656899674942 60-61 0.008611887145444952 62-63 0.01845730719766451 64-65 0.03620647513403249 66-67 0.03826236331199017 68-69 0.02864537527954368 70-71 0.042648258091633216 72-73 0.027320469564859843 74-75 0.026018407052153317 76-77 0.24935639278428934 78-79 0.07298403031749766 80-81 0.055074959967288534 82-83 0.02138123705075988 84-85 0.03357950690664212 86-87 0.08374317844880953 88-89 0.26751673835624884 90-91 0.32592680581222433 92-93 0.054435350311923925 94-95 0.0048656020211665105 96-97 0.011010423353062246 98-99 0.0015990241384115293 100-101 0.0013934353206157613 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2188835.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.475442868932916 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3029348033911 50.33788907451363 2 11.903552625813075 15.111665492742684 3 3.762130233874826 7.164086481774203 4 1.6813943233243245 4.269089972412851 5 0.879351677037909 2.790861856876007 6 0.546947041534886 2.0830623412367726 7 0.39134625485780355 1.738861378953816 8 0.2853306536117724 1.4489191681671478 9 0.20815640633753113 1.1891538070452308 >10 0.9971252495414624 10.596620142759942 >50 0.03030294170364578 1.2734789432270066 >100 0.010127472672691179 1.2217366293161476 >500 0.0010113571215497005 0.4677162000913233 >1k 2.8895917758545435E-4 0.3068585108833135 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2285 0.10439343303629556 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.568640395461513E-5 2 0.0 0.0 0.0 0.0 4.568640395461513E-5 3 0.0 0.0 0.0 0.0 4.568640395461513E-5 4 0.0 0.0 0.0 0.0 4.568640395461513E-5 5 0.0 0.0 0.0 0.0 9.137280790923026E-5 6 0.0 0.0 0.0 0.0 9.137280790923026E-5 7 0.0 0.0 0.0 0.0 1.3705921186384537E-4 8 0.0 0.0 0.0 0.0 1.3705921186384537E-4 9 0.0 0.0 0.0 4.568640395461513E-5 2.2843201977307563E-4 10-11 0.0 0.0 0.0 1.3705921186384537E-4 2.2843201977307563E-4 12-13 0.0 0.0 0.0 1.3705921186384537E-4 3.1980482768230586E-4 14-15 0.0 0.0 0.0 1.3705921186384537E-4 3.6549123163692103E-4 16-17 0.0 0.0 0.0 1.3705921186384537E-4 4.1117763559153615E-4 18-19 0.0 0.0 0.0 1.3705921186384537E-4 4.1117763559153615E-4 20-21 0.0 0.0 0.0 1.3705921186384537E-4 5.025504435007664E-4 22-23 0.0 0.0 0.0 4.5686403954615126E-4 5.25393645478074E-4 24-25 0.0 0.0 0.0 7.081392612965345E-4 5.939232514099967E-4 26-27 0.0 0.0 0.0 0.0013934353206157615 5.939232514099967E-4 28-29 0.0 0.0 0.0 0.0049569748290757415 5.939232514099967E-4 30-31 0.0 0.0 0.0 0.0187314256213922 6.167664533873042E-4 32-33 0.0 0.0 0.0 0.05032357395600856 6.396096553646117E-4 34-35 4.568640395461513E-5 0.0 0.0 0.09660390116203368 6.396096553646117E-4 36-37 4.568640395461513E-5 0.0 0.0 0.1643339950247506 6.396096553646117E-4 38-39 4.568640395461513E-5 0.0 0.0 0.25392503317975085 6.396096553646117E-4 40-41 4.568640395461513E-5 0.0 0.0 0.35272188173160607 6.396096553646117E-4 42-43 4.568640395461513E-5 0.0 0.0 0.4653160242777551 6.396096553646117E-4 44-45 4.568640395461513E-5 0.0 0.0 0.6220432330440623 6.396096553646117E-4 46-47 4.568640395461513E-5 0.0 0.0 0.7998547172354243 6.396096553646117E-4 48-49 4.568640395461513E-5 0.0 0.0 0.9682319590101582 6.396096553646117E-4 50-51 4.568640395461513E-5 0.0 0.0 1.1328629156606138 6.396096553646117E-4 52-53 4.568640395461513E-5 0.0 0.0 1.3140551937446177 7.766688672284571E-4 54-55 4.568640395461513E-5 0.0 0.0 1.536685040215457 8.90884877114995E-4 56-57 4.568640395461513E-5 0.0 0.0 1.8013463783245425 9.3657128106961E-4 58-59 4.568640395461513E-5 0.0 0.0 2.070896161656772 9.594144830469177E-4 60-61 4.568640395461513E-5 0.0 0.0 2.3380930951853385 9.594144830469177E-4 62-63 4.568640395461513E-5 0.0 0.0 2.6174426121658323 0.0010051008870015329 64-65 4.568640395461513E-5 0.0 0.0 2.9509305178325453 0.0010051008870015329 66-67 4.568640395461513E-5 0.0 0.0 3.3522855765738395 0.0010051008870015329 68-69 4.568640395461513E-5 0.0 0.0 3.779681885569264 0.0010051008870015329 70-71 4.568640395461513E-5 0.0 0.0 4.209134082742646 0.001050787290956148 72-73 4.568640395461513E-5 0.0 0.0 4.650647490560047 0.0011878465028199933 74-75 4.568640395461513E-5 4.568640395461513E-5 0.0 5.138281323169632 0.0011878465028199933 76-77 4.568640395461513E-5 4.568640395461513E-5 0.0 5.710457846297231 0.0011878465028199933 78-79 4.568640395461513E-5 4.568640395461513E-5 0.0 6.335356479588457 0.0011878465028199933 80-81 4.568640395461513E-5 4.568640395461513E-5 0.0 6.973938190864089 0.0012106897047973009 82-83 4.568640395461513E-5 4.568640395461513E-5 0.0 7.612200097312041 0.0012335329067746084 84-85 4.568640395461513E-5 4.568640395461513E-5 0.0 8.300397243282386 0.0012335329067746084 86-87 4.568640395461513E-5 4.568640395461513E-5 0.0 9.07411933745577 0.0012335329067746084 88-89 4.568640395461513E-5 4.568640395461513E-5 0.0 9.907347972780041 0.0012335329067746084 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2080 0.0 54.15494 1 GTATCAA 3875 0.0 42.68356 1 CAACGCG 55 0.0025679662 34.578766 9 TCAACGC 4740 0.0 34.54127 4 ATCAACG 4925 0.0 33.051067 3 CAACGCA 5015 0.0 32.70998 5 TATCAAC 4995 0.0 32.682896 2 AACGCAG 5290 0.0 30.91896 6 ACGCAGA 6170 0.0 26.3544 7 CGCAGAG 6235 0.0 25.698374 8 GCAGAGT 7240 0.0 21.277403 9 GTACATG 3900 0.0 21.204975 1 TACATGG 4175 0.0 19.89203 2 GTGGTAT 1040 0.0 19.651161 1 AGAGTAC 6260 0.0 19.481627 10-11 GAGTACT 4580 0.0 18.543251 12-13 CAGAGTA 6680 0.0 18.505852 10-11 ACATGGG 4455 0.0 18.109179 3 TATACTG 795 0.0 17.942635 5 TGGTATC 1075 0.0 17.65831 2 >>END_MODULE