##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921389_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3665988 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.544656447320612 31.0 31.0 34.0 27.0 34.0 2 30.605218293131347 31.0 31.0 34.0 27.0 34.0 3 30.653678080779315 33.0 31.0 34.0 26.0 34.0 4 34.13900781999286 37.0 35.0 37.0 30.0 37.0 5 34.14305175030579 37.0 35.0 37.0 30.0 37.0 6 34.19062746522902 37.0 35.0 37.0 30.0 37.0 7 34.11192098828474 37.0 35.0 37.0 30.0 37.0 8 34.07741023702205 37.0 35.0 37.0 30.0 37.0 9 35.65137419980644 39.0 37.0 39.0 30.0 39.0 10-11 35.54633512166434 39.0 37.0 39.0 30.0 39.0 12-13 35.4462274562819 39.0 36.0 39.0 30.0 39.0 14-15 36.59113245869872 40.0 37.0 41.0 30.0 41.0 16-17 36.55231154602798 40.0 37.0 41.0 30.0 41.0 18-19 36.52392642856441 40.0 37.0 41.0 29.0 41.0 20-21 36.472939491345855 40.0 37.0 41.0 29.0 41.0 22-23 36.35761287270989 40.0 37.0 41.0 28.5 41.0 24-25 36.26822482779539 40.0 36.5 41.0 28.0 41.0 26-27 36.12435242559441 40.0 36.0 41.0 27.0 41.0 28-29 35.98784052211846 40.0 36.0 41.0 27.0 41.0 30-31 35.83218766673541 40.0 36.0 41.0 27.0 41.0 32-33 35.63805432532785 40.0 35.5 41.0 26.5 41.0 34-35 35.46728508112956 39.0 35.0 41.0 25.5 41.0 36-37 35.29160842861461 39.0 35.0 41.0 25.0 41.0 38-39 35.49142727690325 39.5 35.0 41.0 25.5 41.0 40-41 35.59566766175995 40.0 35.0 41.0 25.5 41.0 42-43 35.416633796946414 40.0 35.0 41.0 25.0 41.0 44-45 35.282077982797546 40.0 35.0 41.0 24.0 41.0 46-47 35.10959364842438 40.0 35.0 41.0 23.5 41.0 48-49 34.95355058445364 40.0 35.0 41.0 23.0 41.0 50-51 33.244504755607494 37.0 32.5 39.5 18.5 40.0 52-53 33.399781586846444 37.5 33.5 39.5 19.0 40.0 54-55 34.27841075857313 39.0 34.0 40.5 19.5 41.0 56-57 34.30699404908036 39.0 34.0 41.0 20.0 41.0 58-59 34.1440921246878 39.0 34.0 41.0 18.5 41.0 60-61 33.9174849999509 38.0 34.0 41.0 17.5 41.0 62-63 33.649259081044455 38.0 34.0 40.0 14.0 41.0 64-65 33.368500660667735 37.0 34.0 40.0 13.0 41.0 66-67 33.036130232832186 37.0 33.0 40.0 9.5 41.0 68-69 32.67819534597494 36.0 33.0 39.0 7.5 41.0 70-71 32.29402264819197 36.0 33.0 39.0 4.5 41.0 72-73 31.930177076411596 35.0 32.0 39.0 2.0 40.5 74-75 31.52189259757533 35.0 32.0 37.5 2.0 40.0 76-77 31.130841262982855 35.0 32.0 37.0 2.0 39.0 78-79 30.763704218344415 35.0 31.5 36.5 2.0 39.0 80-81 30.38689024623103 35.0 31.0 36.0 2.0 38.0 82-83 30.05991181640529 35.0 31.0 36.0 2.0 37.0 84-85 29.793271418237047 35.0 31.0 35.0 2.0 37.0 86-87 29.544894718695204 35.0 31.0 35.0 2.0 36.0 88-89 29.31647989573343 35.0 31.0 35.0 2.0 36.0 90-91 29.037544039969582 35.0 30.0 35.0 2.0 36.0 92-93 28.82911114275333 34.0 30.0 35.0 2.0 35.5 94-95 28.609314323996696 34.0 30.0 35.0 2.0 35.0 96-97 28.348289465213742 34.0 30.0 35.0 2.0 35.0 98-99 28.107272855230292 34.0 29.5 35.0 2.0 35.0 100-101 27.052655246007355 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 108495.0 3 19327.0 4 13286.0 5 9899.0 6 9425.0 7 9829.0 8 10546.0 9 11526.0 10 12784.0 11 13820.0 12 14396.0 13 15328.0 14 16782.0 15 18731.0 16 19971.0 17 21990.0 18 19330.0 19 16895.0 20 16612.0 21 16975.0 22 18745.0 23 21069.0 24 24111.0 25 28164.0 26 33362.0 27 39594.0 28 45972.0 29 54072.0 30 64073.0 31 78137.0 32 96179.0 33 124227.0 34 169972.0 35 246827.0 36 406600.0 37 744134.0 38 877983.0 39 196750.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.6520910887198 18.748021353012454 12.88342084866216 24.71646670960558 2 15.671207736404153 20.06975777473845 39.607147838281406 24.651886650575996 3 18.83394548343483 23.99519231556488 30.104876077130367 27.065986123869923 4 12.804606447541806 15.866009736052325 37.658996896210276 33.6703869201956 5 13.577713898493068 37.37219253409268 35.28333446591251 13.766759101501746 6 32.7547977799295 36.25203906158559 17.254055546506702 13.739107611978211 7 27.954253412305853 32.40101380200305 21.66360652696424 17.981126258726853 8 25.93225171444279 35.33767054050478 20.39411380325959 18.335963941792844 9 26.15736616612968 15.759207485982335 20.12494826335392 37.958478084534065 10-11 24.81779078920264 25.792183413798327 28.72562006245302 20.664405734546015 12-13 25.471945097436798 23.353221196761606 28.416270221370432 22.758563484431164 14-15 22.56092410802674 25.05425611506158 25.81077841304565 26.574041363866037 16-17 22.555643385728562 28.11069112098799 26.72207243797309 22.61159305531036 18-19 22.515103899934328 27.36202130739216 28.233099497887242 21.889775294786272 20-21 22.986214871414834 26.620766261278415 28.28303361233562 22.109985254971125 22-23 22.79849392415776 26.526131245506384 27.968701153545588 22.706673676790274 24-25 22.539026208315978 26.676833781857116 28.104368798572548 22.67977121125436 26-27 22.511024088388623 26.870247629109844 27.960097854857906 22.65863042764363 28-29 22.57489499006684 27.113386718526726 27.857210773021258 22.454507518385178 30-31 22.821695850402346 26.791509617210362 27.779802657855164 22.606991874532127 32-33 22.505157031137788 26.868763088656195 27.720472885057983 22.905606995148034 34-35 22.950955850499067 26.896614939399328 27.709257002059122 22.443172208042476 36-37 22.942663050853746 26.749577767960663 27.66620625654932 22.64155292463627 38-39 22.696273199581533 26.932438017374366 27.739900074882456 22.631388708161644 40-41 22.917086361672915 26.733738759277674 27.780001754023925 22.569173125025486 42-43 22.77543341543955 26.737403488974298 27.56069360685488 22.926469488731275 44-45 22.756938020035502 26.854418072672765 27.605646890343138 22.7829970169486 46-47 22.95560402029251 26.88991178364095 27.276802143660394 22.877682052406143 48-49 22.69033124543232 27.046991165002847 27.27333228018141 22.98934530938342 50-51 22.82022872347985 27.064641549573697 27.306844431520155 22.808285295426295 52-53 23.010079360133638 26.94926483369794 27.24283391877694 22.79782188739148 54-55 22.64859982180047 26.884323361083627 27.479105285310563 22.987971531805336 56-57 22.75631822313603 27.017335641599686 27.308825565393825 22.917520569870454 58-59 22.720909077987976 26.934365505154485 27.412353590097098 22.932371826760445 60-61 22.650572638046587 26.88912059464645 27.574793784837016 22.88551298246995 62-63 22.74294553242679 26.834809379142342 27.573968912494934 22.848276175935933 64-65 22.518258156120645 26.722366280540566 27.519333069741464 23.240042493597326 66-67 22.494794744290616 26.881941138110232 27.391862145040918 23.23140197255823 68-69 22.696661949327137 26.69887084492853 27.435893651597965 23.168573554146366 70-71 22.555309418624812 26.563413947315095 27.452294213137517 23.42898242092257 72-73 22.559334468478408 26.619129221386224 27.41171755575509 23.409818754380286 74-75 22.53763370922178 26.744823187223925 27.30864219123934 23.40890091231495 76-77 22.565233390171393 26.523610932529046 27.401610695593725 23.509544981705833 78-79 22.492015032745574 26.544793380387315 27.406414024293653 23.556777562573455 80-81 22.604873065390414 26.56664950339741 27.276407867620755 23.552069563591417 82-83 22.558440433007725 26.55720643918425 27.34784820618468 23.53650492162335 84-85 22.55278226992463 26.572192171308796 27.305892785484588 23.569132773281986 86-87 22.427100825517158 26.61223823582002 27.287820436758015 23.67284050190481 88-89 22.413084149454555 26.409683602600253 27.301677827302633 23.875554420642562 90-91 22.374777523518944 26.3168967299033 27.393477850774666 23.91484789580309 92-93 22.420564235553375 26.19309831948741 27.55965457421227 23.82668287074694 94-95 22.3566522204511 26.0482917130202 27.627672913325302 23.967383153203397 96-97 22.336475788728777 25.875709814200743 27.589189741979958 24.198624655090523 98-99 22.2158334987475 25.869695741829226 27.51942181050044 24.39504894892284 100-101 22.322845561623428 25.670590853856613 27.666545078295986 24.340018506223977 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 158.0 1 119.0 2 155.5 3 241.0 4 230.0 5 265.0 6 438.5 7 786.5 8 1197.5 9 1336.5 10 1200.0 11 1102.0 12 1160.0 13 1291.0 14 1453.0 15 1658.5 16 1902.0 17 2157.5 18 2402.0 19 2713.5 20 3065.0 21 3477.5 22 4157.0 23 5095.0 24 6377.0 25 8374.5 26 11423.5 27 15712.0 28 21310.0 29 28003.0 30 35410.0 31 44018.5 32 54686.5 33 62198.5 34 67311.5 35 75086.0 36 84414.5 37 92997.5 38 100002.5 39 107029.5 40 114207.5 41 120091.0 42 124874.5 43 131117.0 44 136796.0 45 142635.5 46 146152.0 47 147475.0 48 150229.5 49 150561.5 50 147413.0 51 142827.0 52 138497.5 53 134347.5 54 129193.5 55 121778.0 56 111302.5 57 99064.5 58 88134.5 59 76062.5 60 61984.5 61 49878.0 62 40261.0 63 30397.5 64 21231.5 65 15173.0 66 11058.5 67 8213.5 68 6188.5 69 4517.5 70 3286.5 71 2354.5 72 1671.0 73 1235.0 74 946.0 75 697.0 76 488.5 77 345.0 78 243.0 79 177.5 80 138.5 81 114.0 82 90.0 83 68.0 84 56.5 85 50.0 86 42.0 87 34.5 88 36.5 89 38.5 90 30.5 91 25.0 92 22.5 93 21.0 94 18.0 95 15.5 96 14.5 97 11.0 98 6.0 99 4.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.050954885831595735 2 0.05911094089778799 3 0.05057299696562018 4 0.05673777437351132 5 0.04869083041188351 6 0.019067165522636736 7 0.01576655460956228 8 0.0219040542413123 9 0.02157672092761897 10-11 0.02272238752554564 12-13 0.02789152610428621 14-15 0.045131080625468493 16-17 0.029650942665387887 18-19 0.02386805412347231 20-21 0.02793244276849788 22-23 0.04810435822484962 24-25 0.04253969189206293 26-27 0.0319831925254529 28-29 0.02017191545635174 30-31 0.012984221443168936 32-33 0.009860916075011703 34-35 0.009601777201671146 36-37 0.0014593610235494497 38-39 0.006628499602290025 40-41 0.003587027562556124 42-43 0.21608090370181243 44-45 0.19048071079337958 46-47 0.19638634932793017 48-49 0.19449054388612294 50-51 0.19290843286993847 52-53 0.19705465484338738 54-55 0.19552709937948515 56-57 0.2057426265443313 58-59 0.2025102100716096 60-61 0.20765207087420906 62-63 0.20481518215553352 64-65 0.20606995985802462 66-67 0.19601809935002515 68-69 0.19492698830438068 70-71 0.1787376281646312 72-73 0.18651179436484788 74-75 0.1864435999244951 76-77 0.18443868337812344 78-79 0.21024345960761465 80-81 0.21774484804642022 82-83 0.2167764869934108 84-85 0.2114573206458941 86-87 0.22918787513761638 88-89 0.2275239307930086 90-91 0.22635098641894083 92-93 0.23112459724363527 94-95 0.24166745772217477 96-97 0.2419265965955153 98-99 0.23191565275172749 100-101 0.24113554108742308 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3665988.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.87387030205943 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5782363458864 46.44909261236115 2 12.636640333859784 15.132091288065874 3 4.17591035019919 7.500837441025617 4 1.8423958311367505 4.412454761541472 5 1.0268872163798286 3.074185600418434 6 0.6352946901153557 2.2822531127732306 7 0.41730551760180007 1.7489987506056768 8 0.2984440014772481 1.4295197949501106 9 0.22314852771481733 1.2024689405843239 >10 1.0895135735522046 11.391846843372088 >50 0.05510760901784188 2.2239351273154186 >100 0.019194101392045828 1.9272132049773054 >500 0.0011439891100035627 0.4473275047861439 >1k 7.779125566773764E-4 0.777775017223112 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4077 0.1112114933273104 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.183332842333363E-5 2 0.0 0.0 0.0 8.183332842333363E-5 8.183332842333363E-5 3 0.0 0.0 0.0 8.183332842333363E-5 8.183332842333363E-5 4 0.0 2.727777614111121E-5 0.0 8.183332842333363E-5 1.0911110456444484E-4 5 0.0 2.727777614111121E-5 0.0 8.183332842333363E-5 1.0911110456444484E-4 6 0.0 2.727777614111121E-5 0.0 8.183332842333363E-5 1.6366665684666726E-4 7 0.0 2.727777614111121E-5 0.0 8.183332842333363E-5 1.6366665684666726E-4 8 0.0 2.727777614111121E-5 0.0 8.183332842333363E-5 1.6366665684666726E-4 9 0.0 2.727777614111121E-5 0.0 8.183332842333363E-5 1.9094443298777846E-4 10-11 0.0 2.727777614111121E-5 0.0 1.9094443298777846E-4 1.9094443298777846E-4 12-13 0.0 2.727777614111121E-5 0.0 1.9094443298777846E-4 2.727777614111121E-4 14-15 0.0 2.727777614111121E-5 0.0 2.0458332105833407E-4 3.8188886597555693E-4 16-17 0.0 2.727777614111121E-5 0.0 2.454999852700009E-4 3.8188886597555693E-4 18-19 0.0 2.727777614111121E-5 0.0 2.454999852700009E-4 3.8188886597555693E-4 20-21 0.0 2.727777614111121E-5 0.0 3.000555375522233E-4 4.0916664211666814E-4 22-23 0.0 2.727777614111121E-5 0.0 3.8188886597555693E-4 4.3644441825777935E-4 24-25 0.0 2.727777614111121E-5 0.0 5.18277746681113E-4 4.909999705400018E-4 26-27 0.0 2.727777614111121E-5 0.0 0.001036555493362226 5.319166347516687E-4 28-29 0.0 2.727777614111121E-5 0.0 0.004337166406436682 5.455555228222242E-4 30-31 0.0 2.727777614111121E-5 0.0 0.016121165699396724 5.455555228222242E-4 32-33 0.0 2.727777614111121E-5 0.0 0.040275636472350704 5.455555228222242E-4 34-35 0.0 2.727777614111121E-5 0.0 0.07126319016865304 6.54666627386669E-4 36-37 0.0 2.727777614111121E-5 0.0 0.11954485393841988 6.819444035277803E-4 38-39 0.0 2.727777614111121E-5 0.0 0.1965227382086357 6.819444035277803E-4 40-41 0.0 2.727777614111121E-5 0.0 0.28390709407668546 6.955832915983358E-4 42-43 0.0 2.727777614111121E-5 0.0 0.37640603297119357 7.364999558100026E-4 44-45 0.0 2.727777614111121E-5 0.0 0.4940959981320179 8.046943961627806E-4 46-47 0.0 2.727777614111121E-5 0.0 0.6299393233147517 8.456110603744475E-4 48-49 0.0 2.727777614111121E-5 0.0 0.77153825926326 8.865277245861143E-4 50-51 0.0 2.727777614111121E-5 0.0 0.9213887224944544 9.274443887977811E-4 52-53 0.0 2.727777614111121E-5 0.0 1.0815092684427772 9.819999410800035E-4 54-55 0.0 2.727777614111121E-5 0.0 1.263574785296624 0.001036555493362226 56-57 0.0 2.727777614111121E-5 0.0 1.478169050198746 0.001036555493362226 58-59 0.0 2.727777614111121E-5 0.0 1.7084889530462184 0.001036555493362226 60-61 0.0 2.727777614111121E-5 0.0 1.9494608274767948 0.001063833269503337 62-63 0.0 2.727777614111121E-5 0.0 2.20364878444774 0.0011183888217855596 64-65 0.0 2.727777614111121E-5 0.0 2.482291267729191 0.0011183888217855596 66-67 0.0 2.727777614111121E-5 0.0 2.8067876927038498 0.0011183888217855596 68-69 0.0 2.727777614111121E-5 0.0 3.156584255049389 0.0011183888217855596 70-71 0.0 2.727777614111121E-5 0.0 3.519719649927932 0.001145666597926671 72-73 0.0 2.727777614111121E-5 0.0 3.8988398216251663 0.0012274999263500045 74-75 0.0 2.727777614111121E-5 0.0 4.30151435302025 0.0012274999263500045 76-77 0.0 2.727777614111121E-5 0.0 4.762249630931689 0.0012274999263500045 78-79 0.0 2.727777614111121E-5 0.0 5.275712850123895 0.0012547777024911157 80-81 0.0 2.727777614111121E-5 0.0 5.80041451308624 0.001309333254773338 82-83 0.0 2.727777614111121E-5 0.0 6.344537952661057 0.0014184443593377829 84-85 0.0 2.727777614111121E-5 0.0 6.918257779348977 0.0014320832474083384 86-87 1.3638888070555605E-5 2.727777614111121E-5 0.0 7.545060158407502 0.0015002776877611167 88-89 2.727777614111121E-5 2.727777614111121E-5 0.0 8.225163312045758 0.0015821110161844502 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3235 0.0 50.019127 1 GTATCAA 6145 0.0 44.01584 1 TCAACGC 7195 0.0 36.740047 4 CAACGCA 7415 0.0 35.71155 5 ATCAACG 7580 0.0 35.05892 3 TATCAAC 7785 0.0 34.197147 2 AACGCAG 7805 0.0 33.857536 6 ACGCAGA 9170 0.0 28.509974 7 CGCAGAG 9395 0.0 27.475542 8 GTACATG 7950 0.0 26.38221 1 TACATGG 8275 0.0 24.602259 2 ACATGGG 8320 0.0 23.727377 3 GCAGAGT 10855 0.0 22.556103 9 CATGGGG 6130 0.0 21.677683 4 GAGTACA 6150 0.0 20.67834 1 AGAGTAC 9135 0.0 19.479277 10-11 GAGTACT 6485 0.0 19.31759 12-13 CAGAGTA 10180 0.0 18.621689 10-11 GTATAGC 1260 0.0 17.700413 1 AGTACAT 6730 0.0 17.346254 2 >>END_MODULE