##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921389_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3665988 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.489927408382133 33.0 31.0 34.0 30.0 34.0 2 31.617404366844628 34.0 31.0 34.0 29.0 34.0 3 31.69459092610232 34.0 31.0 34.0 29.0 34.0 4 35.201659143456006 37.0 35.0 37.0 33.0 37.0 5 34.95811606584637 37.0 35.0 37.0 32.0 37.0 6 34.919890899806546 37.0 35.0 37.0 32.0 37.0 7 34.785563673421734 37.0 35.0 37.0 32.0 37.0 8 34.75114212048703 37.0 35.0 37.0 32.0 37.0 9 36.38205007763255 39.0 37.0 39.0 32.0 39.0 10-11 36.23591730251163 39.0 37.0 39.0 32.0 39.0 12-13 36.179010678703804 39.0 37.0 39.0 32.0 39.0 14-15 37.426225754148675 40.0 38.0 41.0 32.0 41.0 16-17 37.41407405043333 40.0 38.0 41.0 32.0 41.0 18-19 37.39010629603807 40.0 38.0 41.0 32.0 41.0 20-21 37.36069635252488 40.0 38.0 41.0 32.0 41.0 22-23 37.254106941975806 40.0 38.0 41.0 31.0 41.0 24-25 37.1904721182939 40.0 38.0 41.0 31.0 41.0 26-27 37.05468321227457 40.0 37.0 41.0 31.0 41.0 28-29 36.89538795544339 40.0 37.0 41.0 30.0 41.0 30-31 36.74873458396482 40.0 37.0 41.0 30.0 41.0 32-33 36.67843184429409 40.0 37.0 41.0 30.0 41.0 34-35 36.787514579971344 40.0 37.0 41.0 30.0 41.0 36-37 36.74670307158671 40.0 37.0 41.0 30.0 41.0 38-39 36.65060169318612 40.0 37.0 41.0 30.0 41.0 40-41 36.51505433187452 40.0 37.0 41.0 30.0 41.0 42-43 36.396220064004574 40.0 37.0 41.0 30.0 41.0 44-45 36.24178256993749 40.0 36.0 41.0 29.0 41.0 46-47 36.06276220762316 40.0 36.0 41.0 28.0 41.0 48-49 35.88910492887592 40.0 36.0 41.0 27.5 41.0 50-51 35.735002133122094 40.0 35.5 41.0 27.0 41.0 52-53 35.568584512551595 39.5 35.0 41.0 27.0 41.0 54-55 35.36882553898158 39.0 35.0 41.0 26.0 41.0 56-57 35.116731833273874 39.0 35.0 41.0 26.0 41.0 58-59 34.910552216755754 39.0 35.0 41.0 26.0 41.0 60-61 34.6502187132091 38.0 35.0 40.0 25.5 41.0 62-63 34.36829266762466 38.0 34.0 40.0 24.5 41.0 64-65 34.06339928008494 37.0 34.0 40.0 23.5 41.0 66-67 33.73411696928632 37.0 34.0 40.0 23.0 41.0 68-69 33.377935225101666 36.0 34.0 39.0 22.0 41.0 70-71 32.9971781140582 36.0 33.5 39.0 22.0 40.5 72-73 32.59406863852255 35.0 33.0 38.5 20.5 40.0 74-75 32.17875290371927 35.0 33.0 37.0 19.5 39.5 76-77 29.37139646938288 33.0 29.0 34.5 12.0 37.0 78-79 31.030291970404704 34.5 31.5 36.0 14.5 39.0 80-81 31.217374279457545 35.0 32.0 36.0 17.0 37.5 82-83 31.034413915157387 35.0 32.0 35.5 13.5 37.0 84-85 30.779271099632624 35.0 32.0 35.0 9.5 37.0 86-87 30.51208991955238 35.0 32.0 35.0 7.0 36.0 88-89 30.205039678253172 35.0 32.0 35.0 2.0 36.0 90-91 30.00417295419407 34.5 31.0 35.0 2.0 36.0 92-93 29.847480542762277 34.0 31.0 35.0 2.0 35.0 94-95 29.740169498645386 34.0 31.0 35.0 2.0 35.0 96-97 29.536918560562665 34.0 31.0 35.0 2.0 35.0 98-99 29.26435452052762 34.0 31.0 35.0 2.0 35.0 100-101 28.173917235953855 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 58372.0 3 20253.0 4 11290.0 5 8141.0 6 7198.0 7 7459.0 8 7769.0 9 8448.0 10 9702.0 11 10800.0 12 12062.0 13 13493.0 14 14886.0 15 17119.0 16 19367.0 17 21977.0 18 19512.0 19 16173.0 20 14743.0 21 14306.0 22 14955.0 23 16769.0 24 19110.0 25 22667.0 26 27344.0 27 32966.0 28 39102.0 29 46595.0 30 56868.0 31 70071.0 32 89450.0 33 116515.0 34 164234.0 35 244093.0 36 422939.0 37 832988.0 38 979618.0 39 156622.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.76240702195138 20.17013408618222 13.451810140238504 25.615648751627894 2 14.827422257295545 21.438494739865646 37.99809109237361 25.735991910465195 3 17.511655250113893 25.0093978552703 29.996426359824646 27.48252053479116 4 12.530668361598874 17.083498143667327 36.4972461898124 33.888587304921394 5 13.356427801002308 37.7379263601902 35.277754357702854 13.627891481104637 6 32.76184797149111 36.896417402993606 16.845592840479835 13.496141785035451 7 27.83206673249718 32.56880834047104 21.57638612321944 18.02273880381235 8 25.998330569134076 35.76160963687151 20.065413320530727 18.17464647346369 9 25.95868452343121 15.70657506423236 19.96193658078984 38.37280383154659 10-11 24.7530804360737 26.094259637242384 28.580849073991903 20.57181085269201 12-13 25.402573447678478 23.4970241220826 28.410761987868444 22.68964044237048 14-15 22.467839963161886 25.235308776317982 25.746074799868023 26.55077646065211 16-17 22.529246260517137 28.401507208915266 26.595824337902414 22.473422192665186 18-19 22.4677094726109 27.510870574795327 28.207015624358544 21.814404328235234 20-21 22.91283553109751 26.710080482318343 28.280719336719528 22.096364649864615 22-23 22.69950013297963 26.634701545973442 27.984260667353162 22.681537653693766 24-25 22.484822785536966 26.827638590325893 28.085065233618835 22.60247339051831 26-27 22.49682784518384 27.01976208463799 27.976789224207483 22.506620845970694 28-29 22.579980773406632 27.18911187760451 27.860064881568768 22.37084246742009 30-31 22.785472315351786 26.915245988001995 27.730699945409054 22.56858175123716 32-33 22.465403544267055 26.968573081461834 27.70375074973936 22.86227262453176 34-35 22.885935005905008 26.963991321316712 27.73441133936047 22.415662333417814 36-37 22.88245999947626 26.879361759237437 27.685700740217 22.552477501069298 38-39 22.681829694309446 27.034010155815153 27.74290683919723 22.541253310678172 40-41 22.874356758455434 26.869546904802434 27.721541881080512 22.534554455661617 42-43 22.759017005682747 26.88061103371101 27.49659883617043 22.86377312443581 44-45 22.74513500109393 26.940829981062148 27.535686479485083 22.778348538358838 46-47 22.938612596224722 27.036207612426537 27.219927335978078 22.805252455370663 48-49 22.66817984651773 27.199753380783886 27.2031771320695 22.92888964062888 50-51 22.800973491148053 27.216355720638102 27.19711013399484 22.785560654219005 52-53 23.092198906577934 27.0813727078754 27.058240737255186 22.76818764829148 54-55 22.625260504751825 27.039711289812217 27.31362317101114 23.021405034424816 56-57 22.68615707729498 27.18294949612885 27.14966861655339 22.98122481002278 58-59 22.666483342458623 27.05906231304409 27.284875725556024 22.989578618941266 60-61 22.634115322338758 27.09564419397954 27.37115649832714 22.89908398535457 62-63 22.704662190394227 27.024850310061055 27.32100400878339 22.949483490761327 64-65 22.43263144523967 26.923627391577043 27.296385348856344 23.347355814326942 66-67 22.404838165017445 27.087529718353576 27.208906808018586 23.29872530861039 68-69 22.588898449267745 26.91389287970662 27.179321860060156 23.31788681096548 70-71 22.494154985164887 26.77924844059029 27.17108104291302 23.555515531331803 72-73 22.54601185145895 26.871960805820628 27.060840363281756 23.521186979438664 74-75 22.40824211204121 27.0111566459668 26.943613781963833 23.63698746002816 76-77 22.44015869270201 26.742219515789838 27.119427770019723 23.698194021488426 78-79 22.40155884973006 26.7781465689433 27.107847599700886 23.712446981625757 80-81 22.516774182279082 26.78997391895772 26.95142474107278 23.741827157690416 82-83 22.400973469013305 26.7884594266273 26.993752800803765 23.81681430355563 84-85 22.34604859352834 26.781927789415494 26.96927725292096 23.90274636413521 86-87 22.250362406873037 26.869173166330423 26.894384672714516 23.986079754082027 88-89 22.188365260788327 26.663150295598076 26.909401114234697 24.239083329378897 90-91 22.120287319959804 26.571896762724588 26.980209535152035 24.32760638216357 92-93 22.11620652387502 26.494945525206877 27.132185978472084 24.256661972446018 94-95 21.991658005504952 26.33754252153015 27.17924376464555 24.49155570831935 96-97 21.91521712413253 26.16689634646125 27.18338459582653 24.734501933579686 98-99 21.777206573432697 26.192010586102306 27.069057486916382 24.96172535354862 100-101 21.72178152070597 26.153269745198738 27.094080078604765 25.03086865549053 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 141.0 1 111.5 2 134.5 3 201.5 4 191.0 5 197.0 6 336.5 7 699.5 8 1048.0 9 1111.0 10 924.5 11 796.5 12 846.5 13 937.5 14 1032.5 15 1160.0 16 1384.5 17 1593.5 18 1782.0 19 2108.0 20 2530.0 21 2996.5 22 3667.0 23 4695.5 24 6128.0 25 8192.0 26 11222.0 27 15673.5 28 21285.5 29 28038.5 30 35833.5 31 44396.0 32 55226.0 33 62645.0 34 67756.5 35 75047.5 36 84243.0 37 93481.5 38 100329.0 39 107162.0 40 114014.0 41 119932.5 42 124934.0 43 131155.0 44 137296.0 45 143626.0 46 147387.0 47 148976.5 48 151749.5 49 152014.0 50 149160.0 51 144392.5 52 139709.0 53 135630.5 54 130518.0 55 122940.5 56 111996.0 57 99132.0 58 87480.0 59 75315.0 60 61204.0 61 49150.0 62 39660.0 63 29757.0 64 20410.0 65 14084.5 66 10281.0 67 7716.5 68 5663.5 69 4068.0 70 2874.0 71 2024.5 72 1445.5 73 1036.5 74 746.5 75 501.0 76 325.5 77 195.5 78 101.0 79 53.0 80 32.0 81 22.0 82 18.5 83 15.0 84 7.5 85 3.5 86 4.0 87 3.5 88 3.0 89 2.5 90 3.0 91 2.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15223726864354167 2 4.6372219439889056E-4 3 0.007037666244406692 4 0.0043098886302955705 5 0.02839616496289677 6 0.0012002221502088932 7 2.182222091288897E-4 8 0.0018548887775955622 9 2.7277776141111213E-5 10-11 0.10264627161900147 12-13 3.000555375522233E-4 14-15 0.0059874718629739105 16-17 1.7730554491722286E-4 18-19 3.682499779050013E-4 20-21 7.501388438805582E-4 22-23 3.546110898344457E-4 24-25 0.0013229721428438936 26-27 0.0028505276067461215 28-29 0.0063284440647378 30-31 0.014866387996905608 32-33 0.014934582437258388 34-35 0.012411388144205601 36-37 9.819999410800035E-4 38-39 2.5913887334055646E-4 40-41 0.004909999705400018 42-43 0.00902894390270781 44-45 0.00856522170830892 46-47 0.009547221649388923 48-49 0.011402110426984486 50-51 0.005796527429986132 52-53 0.00180033322531334 54-55 7.637777319511139E-4 56-57 0.0059874718629739105 58-59 0.009574499425530035 60-61 0.007405916222311693 62-63 0.018044248917345063 64-65 0.03484735902026957 66-67 0.037520581082098464 68-69 0.026664026177936208 70-71 0.04202141414538182 72-73 0.026022998438620094 74-75 0.02476822073612898 76-77 0.24159926328182196 78-79 0.06867180143524747 80-81 0.05521021890960909 82-83 0.020335582113198407 84-85 0.032160498070370115 86-87 0.08123321734822918 88-89 0.2661356229207515 90-91 0.3219868695696767 92-93 0.05204599687724019 94-95 0.005400999675940019 96-97 0.010297360493269481 98-99 0.0013502499189850048 100-101 0.0014320832474083384 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3665988.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.19101054373645 #Duplication Level Percentage of deduplicated Percentage of total 1 77.15732075316456 45.67019786227019 2 12.789466847707839 15.140429340628852 3 4.210209776801864 7.476197138700642 4 1.9525009061022127 4.622820068790043 5 1.0679478395871496 3.1606455916581773 6 0.6457603883236777 2.2933925972396496 7 0.42845872409522695 1.7752633398833515 8 0.3003362085052596 1.4221762947440522 9 0.22052845791841355 1.1747972050058484 >10 1.15146199769778 11.883111809640212 >50 0.05453905144481583 2.19776108450779 >100 0.01957269454070036 1.9689128983573974 >500 0.0012025660322365062 0.4916149931654882 >1k 6.937880784790003E-4 0.7226797754083601 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4116 0.11227532659681375 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.183332842333363E-5 2 0.0 0.0 0.0 0.0 8.183332842333363E-5 3 0.0 0.0 0.0 0.0 8.183332842333363E-5 4 0.0 0.0 0.0 0.0 8.183332842333363E-5 5 0.0 0.0 0.0 0.0 8.183332842333363E-5 6 0.0 0.0 0.0 0.0 1.0911110456444484E-4 7 0.0 0.0 0.0 0.0 1.3638888070555605E-4 8 0.0 0.0 0.0 2.727777614111121E-5 1.3638888070555605E-4 9 0.0 0.0 0.0 2.727777614111121E-5 2.1822220912888967E-4 10-11 0.0 0.0 0.0 2.727777614111121E-5 2.454999852700009E-4 12-13 0.0 0.0 0.0 5.455555228222242E-5 3.546110898344457E-4 14-15 0.0 0.0 0.0 5.455555228222242E-5 3.9552775404611256E-4 16-17 0.0 0.0 0.0 5.455555228222242E-5 5.046388586105574E-4 18-19 0.0 0.0 0.0 5.455555228222242E-5 5.455555228222242E-4 20-21 0.0 0.0 0.0 8.183332842333363E-5 6.001110751044467E-4 22-23 0.0 0.0 0.0 1.5002776877611165E-4 6.54666627386669E-4 24-25 0.0 0.0 0.0 3.000555375522233E-4 7.364999558100027E-4 26-27 0.0 0.0 0.0 8.456110603744474E-4 7.637777319511139E-4 28-29 0.0 0.0 0.0 0.004228055301872237 7.637777319511139E-4 30-31 0.0 0.0 0.0 0.01628483235624339 7.637777319511139E-4 32-33 0.0 0.0 0.0 0.04090302532359626 7.910555080922251E-4 34-35 0.0 0.0 0.0 0.0723815789904386 8.456110603744475E-4 36-37 0.0 0.0 0.0 0.12135882605180376 8.456110603744475E-4 38-39 0.0 0.0 0.0 0.19971423801714572 8.456110603744475E-4 40-41 0.0 0.0 0.0 0.2882578993711927 8.456110603744475E-4 42-43 0.0 0.0 0.0 0.3814933382215108 8.456110603744475E-4 44-45 0.0 0.0 0.0 0.5000834699949918 8.865277245861143E-4 46-47 1.3638888070555605E-5 0.0 0.0 0.6368269617903823 9.274443887977812E-4 48-49 2.727777614111121E-5 0.0 0.0 0.7787123143883723 9.547221649388924E-4 50-51 2.727777614111121E-5 0.0 0.0 0.9292310831350239 0.0010092777172211148 52-53 2.727777614111121E-5 0.0 0.0 1.0898699068300277 0.0011183888217855594 54-55 2.727777614111121E-5 0.0 0.0 1.273490256923918 0.0012002221502088932 56-57 2.727777614111121E-5 0.0 0.0 1.4890119662148376 0.0012274999263500045 58-59 2.727777614111121E-5 0.0 0.0 1.7196864801521445 0.0012684165905616713 60-61 2.727777614111121E-5 0.0 0.0 1.9616812711880125 0.0013366110309144493 62-63 2.727777614111121E-5 0.0 0.0 2.2174649780632123 0.0014184443593377829 64-65 2.727777614111121E-5 0.0 0.0 2.498057822338753 0.0014184443593377829 66-67 2.727777614111121E-5 0.0 0.0 2.823468052814139 0.0014729999116200054 68-69 2.727777614111121E-5 0.0 0.0 3.1759105594453665 0.0015002776877611165 70-71 2.727777614111121E-5 0.0 0.0 3.54201923192329 0.0015411943519727835 72-73 2.727777614111121E-5 0.0 0.0 3.9242627089886817 0.0016639443446077838 74-75 2.727777614111121E-5 0.0 0.0 4.3323382400597055 0.0017321387849605616 76-77 2.727777614111121E-5 0.0 0.0 4.798215378773744 0.0017594165611016731 78-79 2.727777614111121E-5 0.0 0.0 5.319111791964403 0.00180033322531334 80-81 2.727777614111121E-5 0.0 0.0 5.849255371266899 0.001827611001454451 82-83 2.727777614111121E-5 0.0 0.0 6.400771088175957 0.0019094443298777848 84-85 2.727777614111121E-5 0.0 0.0 6.983697164311504 0.0019094443298777848 86-87 2.727777614111121E-5 0.0 0.0 7.620333181668897 0.0019094443298777848 88-89 2.727777614111121E-5 0.0 0.0 8.309656223642849 0.0019094443298777848 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3295 0.0 51.928173 1 GTATCAA 6290 0.0 43.5239 1 TCAACGC 8025 0.0 33.70942 4 ATCAACG 8360 0.0 32.52893 3 CAACGCA 8355 0.0 32.264805 5 TATCAAC 8765 0.0 30.917591 2 AACGCAG 8790 0.0 30.772896 6 GTACATG 8145 0.0 25.73377 1 ACGCAGA 10500 0.0 25.39911 7 CGCAGAG 10575 0.0 25.039162 8 TACATGG 8490 0.0 23.645805 2 ACATGGG 8730 0.0 22.506477 3 GCAGAGT 12020 0.0 20.842562 9 AGAGTAC 10490 0.0 20.279747 10-11 CATGGGG 6575 0.0 18.983725 4 GAGTACT 7240 0.0 18.742115 12-13 GTACCGT 395 1.8189894E-11 18.052574 6 CAGAGTA 11300 0.0 17.984676 10-11 AGTACTT 8280 0.0 17.562696 12-13 GTACTTT 8185 0.0 16.346378 14-15 >>END_MODULE