##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921388_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1673253 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.305268240965354 31.0 31.0 34.0 26.0 34.0 2 30.358719213412435 31.0 31.0 34.0 26.0 34.0 3 30.413561487712855 31.0 31.0 34.0 26.0 34.0 4 33.8757288945545 37.0 35.0 37.0 30.0 37.0 5 33.8749800538233 37.0 35.0 37.0 30.0 37.0 6 33.92243014057049 37.0 35.0 37.0 30.0 37.0 7 33.834171520983375 37.0 35.0 37.0 29.0 37.0 8 33.80313975232676 37.0 35.0 37.0 29.0 37.0 9 35.344978912334234 39.0 35.0 39.0 29.0 39.0 10-11 35.23684583263858 39.0 35.0 39.0 29.0 39.0 12-13 35.112170723733946 39.0 35.0 39.0 28.0 39.0 14-15 36.21186784066725 40.0 36.0 41.0 27.0 41.0 16-17 36.16519797065955 40.0 36.0 41.0 27.0 41.0 18-19 36.13020834267144 40.0 36.0 41.0 27.0 41.0 20-21 36.07850815148696 40.0 36.0 41.0 27.0 41.0 22-23 35.96590473765772 40.0 36.0 41.0 27.0 41.0 24-25 35.86351585803223 40.0 36.0 41.0 27.0 41.0 26-27 35.71453450255281 40.0 36.0 41.0 27.0 41.0 28-29 35.561652063375945 40.0 36.0 41.0 26.0 41.0 30-31 35.39472124060139 39.0 35.0 41.0 25.0 41.0 32-33 35.19020644218179 39.0 35.0 41.0 25.0 41.0 34-35 35.0175003421479 39.0 35.0 41.0 24.0 41.0 36-37 34.83959747868374 39.0 35.0 41.0 24.0 41.0 38-39 35.046213872020544 39.0 35.0 41.0 24.0 41.0 40-41 35.14299600837411 40.0 35.0 41.0 24.0 41.0 42-43 34.96935848912268 40.0 35.0 41.0 23.0 41.0 44-45 34.830363967672554 40.0 35.0 41.0 22.0 41.0 46-47 34.63740330960112 39.5 35.0 41.0 19.5 41.0 48-49 34.473386570948925 39.0 35.0 41.0 17.5 41.0 50-51 32.77181275037307 37.0 32.0 39.5 13.5 40.0 52-53 32.92537201487163 37.5 32.5 39.5 13.0 40.0 54-55 33.78338362459233 39.0 34.0 40.5 12.0 41.0 56-57 33.81512269812156 39.0 34.0 41.0 10.5 41.0 58-59 33.648998985807886 38.0 34.0 41.0 8.0 41.0 60-61 33.41763409358896 38.0 33.5 40.0 7.5 41.0 62-63 33.13731037685275 37.5 33.0 40.0 4.0 41.0 64-65 32.86467079395644 37.0 33.0 40.0 2.0 41.0 66-67 32.539902513248144 36.5 33.0 39.5 2.0 41.0 68-69 32.178171800678086 36.0 32.0 39.0 2.0 41.0 70-71 31.801642070864357 35.5 32.0 39.0 2.0 41.0 72-73 31.444876238082344 35.0 32.0 38.5 2.0 40.0 74-75 31.048460991852394 35.0 31.5 37.0 2.0 39.5 76-77 30.665373676305975 35.0 31.0 37.0 2.0 39.0 78-79 30.30810283920005 35.0 31.0 36.0 2.0 39.0 80-81 29.947518695618655 35.0 31.0 36.0 2.0 37.5 82-83 29.631613987842844 35.0 31.0 35.5 2.0 37.0 84-85 29.37898363248116 35.0 30.0 35.0 2.0 37.0 86-87 29.1417950543044 35.0 30.0 35.0 2.0 36.0 88-89 28.92704749371434 35.0 30.0 35.0 2.0 36.0 90-91 28.662369946445637 34.0 30.0 35.0 2.0 36.0 92-93 28.44693181485406 34.0 29.5 35.0 2.0 35.0 94-95 28.229059203838272 34.0 29.0 35.0 2.0 35.0 96-97 27.973927134748898 34.0 29.0 35.0 2.0 35.0 98-99 27.74267489734069 34.0 29.0 35.0 2.0 35.0 100-101 26.71353973368044 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 58579.0 3 9989.0 4 6996.0 5 5174.0 6 4817.0 7 4903.0 8 5375.0 9 5549.0 10 6115.0 11 6758.0 12 6922.0 13 7333.0 14 8061.0 15 8842.0 16 9510.0 17 10520.0 18 9538.0 19 8091.0 20 7845.0 21 8144.0 22 8714.0 23 10019.0 24 11544.0 25 13445.0 26 15798.0 27 18390.0 28 21924.0 29 25592.0 30 30275.0 31 36533.0 32 45020.0 33 59029.0 34 82064.0 35 116304.0 36 185130.0 37 334994.0 38 378739.0 39 80625.0 40 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.0168576446297 18.738762118375444 12.77526269809616 24.46911753889869 2 15.64952395532398 19.637523120504095 39.14109233430828 25.571860589863636 3 19.2774571140021 24.14077023485424 29.672643908540962 26.909128742602697 4 13.293032389855117 15.280830879556431 37.04890172055408 34.377235010034376 5 13.586261082954435 38.11621465832092 34.530922250099856 13.766602008624792 6 33.464680126126396 35.444386329333355 17.050017185468565 14.040916359071687 7 28.555375105873885 32.51023173604482 20.89587389217212 18.038519265909176 8 26.792470199471207 35.06345072220067 19.888598835655785 18.255480242672338 9 27.30946309294521 15.20074984547588 19.237804550003048 38.25198251157586 10-11 25.631174517075166 25.47389834196479 27.950923377331012 20.94400376362903 12-13 25.996177538224618 22.790068294969224 28.07393121720957 23.139822949596592 14-15 23.014994161263918 24.523319367802106 25.52529192185601 26.936394549077967 16-17 23.040881239143907 27.730744041720882 26.275373482538033 22.953001236597178 18-19 23.01320836433099 27.097904971869717 27.86064908121899 22.0282375825803 20-21 23.36019268430907 26.182068498817546 28.15299966283833 22.30473915403506 22-23 23.111042149312063 25.95458028424021 27.825607568896277 23.108769997551455 24-25 22.935253493349325 26.05552348446143 27.935464255744176 23.07375876644507 26-27 22.705159786682067 26.511158957490956 27.820437976713897 22.963243279113083 28-29 22.811166719219568 27.022880685987204 27.56149062939446 22.604461965398773 30-31 23.424594078461727 26.414143074454067 27.507897277120456 22.65336556996375 32-33 22.96345794138364 26.41991704617687 27.48796470263723 23.128660309802257 34-35 23.225499893909827 26.683471748635025 27.65525773935288 22.43577061810227 36-37 23.098656701119957 26.701864027780974 27.67005043832847 22.529428832770602 38-39 23.076127708889047 26.81859176917298 27.4989854460063 22.60629507593167 40-41 23.256479714798417 26.523956305348577 27.444855001113133 22.77470897873987 42-43 22.837770285266213 26.58502112023664 27.330960981998903 23.246247612498244 44-45 22.731649884478983 26.72658708152825 27.573202237837958 22.968560796154808 46-47 22.88594235625522 26.63938267549409 27.204446969150244 23.27022799910045 48-49 22.74153964455368 26.89874403217654 27.21327497862004 23.14644134464974 50-51 23.06338634417994 26.83212606422686 27.229116031082473 22.875371560510725 52-53 23.16101816979658 26.70328554791922 27.198757397566002 22.9369388847182 54-55 22.42820781554125 26.554783650247042 27.72783350801018 23.289175026201526 56-57 22.803442137493832 26.68818551652427 27.24285793006953 23.26551441591237 58-59 22.860446423865493 26.775878880514416 27.386734977456 22.97693971816409 60-61 23.11188937895005 26.816907499433217 27.37904528818022 22.692157833436507 62-63 23.001707632476283 26.686384401187617 27.44864973648793 22.863258229848167 64-65 22.585407898070557 26.478380063574132 27.49662034072716 23.43959169762816 66-67 22.64892218217273 26.729738381346312 27.327136957591293 23.294202478889673 68-69 22.741326303124456 26.637037418554254 27.380323899466173 23.241312378855113 70-71 22.664062747934636 26.4786859291984 27.36276284439899 23.49448847846797 72-73 22.59004390326132 26.840692811009383 27.18798458490414 23.38127870082516 74-75 22.568911942540996 26.82138855670418 27.213233440384304 23.39646606037052 76-77 22.487033321586498 26.407711352441847 27.20300295786679 23.90225236810486 78-79 22.4506769333519 26.457948669568772 27.37625993761521 23.715114459464115 80-81 22.73511062628775 26.708305964675187 26.965593815267326 23.59098959376974 82-83 22.747460237493776 26.717181368305848 27.13485915767164 23.40049923652873 84-85 22.652153117069705 26.720790977271562 27.056474715748536 23.5705811899102 86-87 22.39024201740383 26.97617390767745 26.99169110825464 23.64189296666408 88-89 22.31234509247571 26.608866476828503 27.173408357951782 23.905380072744002 90-91 22.576421490039326 26.375718623214972 27.22395762189935 23.823902264846357 92-93 22.800606912996653 26.179009377794355 27.267738200619796 23.752645508589197 94-95 22.61889389780004 26.226807904179633 27.248699678743275 23.905598519277053 96-97 22.379239380894074 26.04089363562199 27.362160669019325 24.21770631446461 98-99 22.121777214590736 25.98580948400983 27.38239351496115 24.510019786438274 100-101 22.364061136836455 26.00355800665344 27.422146883718256 24.210233972791855 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 79.0 1 78.5 2 115.5 3 173.5 4 168.5 5 178.0 6 275.0 7 498.0 8 767.5 9 870.5 10 786.5 11 713.5 12 764.0 13 849.0 14 929.5 15 1036.0 16 1160.0 17 1275.0 18 1417.0 19 1608.0 20 1842.0 21 2061.5 22 2387.5 23 2875.5 24 3523.0 25 4371.5 26 5654.5 27 7428.5 28 9444.5 29 11997.5 30 15121.5 31 18686.0 32 22877.5 33 25993.0 34 28353.5 35 31264.0 36 35439.0 37 39837.5 38 43365.5 39 46529.5 40 48719.0 41 50707.5 42 52858.0 43 55737.5 44 58750.0 45 61626.0 46 64138.0 47 66300.0 48 68391.5 49 69649.0 50 69581.5 51 68796.5 52 67525.0 53 65539.5 54 63197.5 55 59423.0 56 54320.0 57 48224.5 58 41915.0 59 35672.5 60 29291.0 61 23775.0 62 19336.0 63 14907.5 64 10763.5 65 7865.5 66 5756.5 67 4302.0 68 3318.0 69 2594.5 70 1961.5 71 1394.0 72 1030.0 73 764.5 74 591.0 75 457.0 76 328.5 77 238.0 78 160.0 79 108.0 80 75.5 81 62.0 82 55.5 83 46.5 84 36.0 85 30.0 86 25.5 87 23.5 88 22.5 89 17.5 90 13.0 91 12.0 92 15.0 93 11.5 94 7.0 95 9.0 96 6.0 97 4.5 98 5.5 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.053548387482347255 2 0.06191532302646401 3 0.051038306819112235 4 0.05982358914043483 5 0.051695708897578546 6 0.019602534703359265 7 0.01625576048571256 8 0.02271025361974549 9 0.02241143449316989 10-11 0.023875648213390326 12-13 0.030419787085395934 14-15 0.04793058790272601 16-17 0.03092777960057445 18-19 0.024592814117171763 20-21 0.027790178771530664 22-23 0.0495740930988918 24-25 0.0450320423749427 26-27 0.032182819932191964 28-29 0.020050763393222662 30-31 0.0124308756655449 32-33 0.009173747185870875 34-35 0.008845046146637718 36-37 0.0012849222442750737 38-39 0.00621543783277245 40-41 0.0030180731784135452 42-43 0.2320330517859523 44-45 0.20481062935491526 46-47 0.21105594910034525 48-49 0.2070816547168898 50-51 0.20543814952072398 52-53 0.21105594910034525 54-55 0.20935268007886434 56-57 0.22166402809377903 58-59 0.21688292206856943 60-61 0.22312824181399943 62-63 0.22052851541279175 64-65 0.22148473661783366 66-67 0.20998020024467312 68-69 0.20956185346746725 70-71 0.1916028239602738 72-73 0.19910318403732133 74-75 0.1991330659499789 76-77 0.1971907416272375 78-79 0.22563832247723448 80-81 0.23406502184666633 82-83 0.23331797403022733 84-85 0.2285667499176753 86-87 0.2472728272413078 88-89 0.24574884969577226 90-91 0.2443742817135245 92-93 0.24804975697040435 94-95 0.25928535612964687 96-97 0.26071968793720973 98-99 0.24984267172985797 100-101 0.25943476569293467 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1673253.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.48133185338511 #Duplication Level Percentage of deduplicated Percentage of total 1 82.13280512775229 55.42431078875264 2 10.5639371545815 14.257370976132384 3 3.174555154436313 6.42669629590173 4 1.3897535611604042 3.7512968502035595 5 0.7430251317688984 2.5070162746151117 6 0.4643957166390811 1.8802824879487459 7 0.315787605262833 1.4916837730148913 8 0.22780453107134166 1.229804252714399 9 0.1654380920552334 1.0047584512053076 >10 0.7850575586030979 8.903175936137144 >50 0.026152776253756147 1.1774485050197065 >100 0.010310103845700198 1.2978079743681896 >500 7.108993232611895E-4 0.30450501940271035 >1k 2.665872462229461E-4 0.34384241458352527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2547 0.15221846307760992 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1847 0.1103837853570261 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.976382531511971E-5 0.0 5 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 6 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 7 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 8 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 9 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 10-11 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 12-13 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 14-15 0.0 0.0 0.0 5.976382531511971E-5 5.976382531511971E-5 16-17 0.0 0.0 0.0 8.964573797267956E-5 1.1952765063023942E-4 18-19 0.0 0.0 0.0 1.1952765063023942E-4 1.1952765063023942E-4 20-21 0.0 0.0 0.0 1.1952765063023942E-4 1.1952765063023942E-4 22-23 0.0 0.0 0.0 1.7929147594535912E-4 1.4940956328779928E-4 24-25 0.0 0.0 0.0 1.7929147594535912E-4 1.7929147594535912E-4 26-27 0.0 2.9881912657559855E-5 0.0 5.677563404936373E-4 1.7929147594535912E-4 28-29 0.0 5.976382531511971E-5 0.0 0.0029583093530984256 1.7929147594535912E-4 30-31 0.0 5.976382531511971E-5 0.0 0.012640049054147819 1.7929147594535912E-4 32-33 0.0 5.976382531511971E-5 0.0 0.03254140288408268 1.7929147594535912E-4 34-35 0.0 5.976382531511971E-5 0.0 0.05937536045057143 1.7929147594535912E-4 36-37 0.0 5.976382531511971E-5 0.0 0.10001476166485285 1.7929147594535912E-4 38-39 0.0 5.976382531511971E-5 0.0 0.16656178115323864 1.7929147594535912E-4 40-41 0.0 5.976382531511971E-5 0.0 0.24371687963505817 1.7929147594535912E-4 42-43 0.0 5.976382531511971E-5 0.0 0.32374064173200345 1.7929147594535912E-4 44-45 0.0 5.976382531511971E-5 0.0 0.4171813826121932 1.7929147594535912E-4 46-47 0.0 5.976382531511971E-5 0.0 0.5236207554984214 2.3905530126047884E-4 48-49 0.0 5.976382531511971E-5 0.0 0.6391442298325478 3.5858295189071824E-4 50-51 0.0 5.976382531511971E-5 0.0 0.7614210164272827 3.5858295189071824E-4 52-53 0.0 5.976382531511971E-5 0.0 0.8962780882508503 4.18346777205838E-4 54-55 2.9881912657559855E-5 5.976382531511971E-5 0.0 1.0511261596423256 4.781106025209577E-4 56-57 5.976382531511971E-5 5.976382531511971E-5 0.0 1.2188832173018667 5.079925151785175E-4 58-59 5.976382531511971E-5 8.964573797267956E-5 0.0 1.395754258321963 5.378744278360774E-4 60-61 5.976382531511971E-5 1.1952765063023942E-4 0.0 1.5876857833214701 5.378744278360774E-4 62-63 5.976382531511971E-5 1.1952765063023942E-4 0.0 1.7903150330523836 5.378744278360774E-4 64-65 5.976382531511971E-5 1.1952765063023942E-4 0.0 2.0151166619752066 5.378744278360774E-4 66-67 5.976382531511971E-5 1.1952765063023942E-4 0.0 2.2738043798517023 5.677563404936372E-4 68-69 5.976382531511971E-5 1.1952765063023942E-4 0.0 2.546656124327881 5.976382531511971E-4 70-71 5.976382531511971E-5 1.1952765063023942E-4 0.0 2.832566264635414 5.976382531511971E-4 72-73 5.976382531511971E-5 1.1952765063023942E-4 0.0 3.1369434269653187 7.171659037814365E-4 74-75 5.976382531511971E-5 1.1952765063023942E-4 0.0 3.452586070367123 7.171659037814365E-4 76-77 5.976382531511971E-5 1.1952765063023942E-4 0.0 3.8083003586427155 7.171659037814365E-4 78-79 5.976382531511971E-5 1.1952765063023942E-4 0.0 4.210152320061581 7.171659037814365E-4 80-81 5.976382531511971E-5 1.1952765063023942E-4 0.0 4.620430980849878 7.171659037814365E-4 82-83 5.976382531511971E-5 1.1952765063023942E-4 0.0 5.054286470724989 7.769297290965562E-4 84-85 5.976382531511971E-5 1.1952765063023942E-4 0.0 5.512854302367902 7.769297290965562E-4 86-87 5.976382531511971E-5 1.1952765063023942E-4 0.0 5.992548646259711 7.769297290965562E-4 88-89 5.976382531511971E-5 1.1952765063023942E-4 0.0 6.5155717635049815 7.769297290965562E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1720 0.0 54.351078 1 GTATCAA 3555 0.0 45.918663 1 TCAACGC 4240 0.0 37.94514 4 CAACGCA 4290 0.0 37.38891 5 ATCAACG 4340 0.0 36.738373 3 TATCAAC 4365 0.0 36.637768 2 AACGCAG 4560 0.0 35.166683 6 ACGCAGA 5380 0.0 29.543911 7 CGCAGAG 5485 0.0 28.638332 8 GTACATG 5030 0.0 27.264673 1 TACATGG 5170 0.0 26.251785 2 ACATGGG 5480 0.0 24.679405 3 GCAGAGT 6245 0.0 24.089245 9 CATGGGG 4635 0.0 23.243336 4 TATACCG 125 2.2709768E-4 22.778473 5 GAGTACA 4045 0.0 22.40708 1 ATGGGGG 3265 0.0 21.36572 5 AGTACAT 4040 0.0 21.143385 2 GTGGTAT 960 0.0 20.266699 1 CCGTATA 120 0.0047896635 19.773573 9 >>END_MODULE