##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921386_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2332926 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.77709837345891 33.0 31.0 34.0 27.0 34.0 2 30.8492125339595 33.0 31.0 34.0 27.0 34.0 3 30.89348269083546 34.0 31.0 34.0 27.0 34.0 4 34.34964160886372 37.0 35.0 37.0 31.0 37.0 5 34.340484867501154 37.0 35.0 37.0 31.0 37.0 6 34.38654848032042 37.0 35.0 37.0 31.0 37.0 7 34.3137677748887 37.0 35.0 37.0 30.0 37.0 8 34.28400686519847 37.0 35.0 37.0 30.0 37.0 9 35.89074321260083 39.0 37.0 39.0 31.0 39.0 10-11 35.79909221295489 39.0 37.0 39.0 30.0 39.0 12-13 35.70020352124328 39.0 37.0 39.0 30.0 39.0 14-15 36.890441016988966 40.0 38.0 41.0 30.5 41.0 16-17 36.832989559034445 40.0 37.0 41.0 30.0 41.0 18-19 36.78266220188725 40.0 37.0 41.0 30.0 41.0 20-21 36.72486268317126 40.0 37.0 41.0 30.0 41.0 22-23 36.613685774859555 40.0 37.0 41.0 30.0 41.0 24-25 36.516973963169 40.0 37.0 41.0 30.0 41.0 26-27 36.37258275658979 40.0 37.0 41.0 29.0 41.0 28-29 36.2382190862462 40.0 37.0 41.0 28.5 41.0 30-31 36.09630266883733 40.0 36.0 41.0 28.0 41.0 32-33 35.925225660822505 40.0 36.0 41.0 27.0 41.0 34-35 35.758916913781235 40.0 36.0 41.0 27.0 41.0 36-37 35.59735413810811 39.5 35.0 41.0 26.0 41.0 38-39 35.839730878733405 40.0 36.0 41.0 27.5 41.0 40-41 35.9657584509753 40.0 36.0 41.0 27.5 41.0 42-43 35.80779073146769 40.0 36.0 41.0 27.0 41.0 44-45 35.687790139935856 40.0 36.0 41.0 26.0 41.0 46-47 35.538722831328556 40.0 35.0 41.0 26.0 41.0 48-49 35.39896957726049 40.0 35.0 41.0 25.0 41.0 50-51 33.679099765701956 38.0 33.0 39.5 22.0 40.0 52-53 33.84442155473427 37.5 33.5 39.5 22.5 40.0 54-55 34.69884985636064 39.0 35.0 40.5 23.0 41.0 56-57 34.70599088869514 39.0 35.0 41.0 23.0 41.0 58-59 34.52081827713352 39.0 35.0 41.0 23.0 41.0 60-61 34.27305281007627 38.0 34.0 40.5 22.5 41.0 62-63 33.97967980981823 37.5 34.0 40.0 22.0 41.0 64-65 33.682563656112535 37.0 34.0 40.0 21.5 41.0 66-67 33.33585956005463 36.5 34.0 39.5 20.5 41.0 68-69 32.96368123120922 36.0 33.5 39.0 19.5 41.0 70-71 32.58369403915941 35.5 33.0 39.0 18.0 40.5 72-73 32.22338642545884 35.0 33.0 37.5 16.5 40.0 74-75 31.822570668765316 35.0 33.0 37.0 12.0 39.0 76-77 31.450666459201877 35.0 32.5 36.5 7.5 39.0 78-79 31.11229438910621 35.0 32.0 36.0 6.0 38.5 80-81 30.769396028849606 35.0 32.0 36.0 2.0 37.0 82-83 30.48424532111177 35.0 32.0 35.0 2.0 37.0 84-85 30.260751948411567 35.0 32.0 35.0 2.0 36.5 86-87 30.04607282871381 35.0 32.0 35.0 2.0 36.0 88-89 29.859842103864416 35.0 31.0 35.0 2.0 36.0 90-91 29.620538542585578 35.0 31.0 35.0 2.0 35.5 92-93 29.4417255412302 35.0 31.0 35.0 2.0 35.0 94-95 29.25492793170465 35.0 31.0 35.0 2.0 35.0 96-97 29.022600159627867 35.0 31.0 35.0 2.0 35.0 98-99 28.804948378131154 34.5 31.0 35.0 2.0 35.0 100-101 27.775651692338293 33.5 28.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 68501.0 3 11875.0 4 8209.0 5 6156.0 6 5783.0 7 5916.0 8 6289.0 9 6665.0 10 7168.0 11 7676.0 12 7832.0 13 8025.0 14 8588.0 15 9118.0 16 9414.0 17 9896.0 18 9033.0 19 8371.0 20 8507.0 21 8906.0 22 9931.0 23 11280.0 24 13175.0 25 15622.0 26 18550.0 27 22243.0 28 26512.0 29 31446.0 30 37126.0 31 45781.0 32 58162.0 33 76582.0 34 109322.0 35 164771.0 36 282111.0 37 528235.0 38 564198.0 39 95933.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.05881575990655 17.777238396975502 13.193792851469965 24.970152991647986 2 17.037650156750566 19.19634777611473 38.08837215286504 25.677629914269662 3 20.066228743892367 22.54165884049096 28.47072667220717 28.921385743409502 4 14.388996437874665 15.66245838969291 34.51320336536359 35.435341807068845 5 15.670694524611845 35.79624739378522 33.08158149100786 15.451476590595071 6 34.81946145611518 32.95956483658007 16.926289651364236 15.294684055940518 7 29.993025037414867 30.605767140852656 20.062941856591856 19.338265965140618 8 27.24830557414552 33.33739192394773 19.543014129468755 19.871288372438 9 26.896822266428867 15.692438949101387 19.21195465770339 38.19878412676636 10-11 26.278100329010833 24.72526695151785 26.885595636512054 22.11103708295926 12-13 26.748971105195302 22.36891693681542 26.604139074764284 24.277972883224997 14-15 24.243888099491134 24.02306399396384 24.133851269743968 27.59919663680106 16-17 24.33258843010358 26.695498080430685 25.081572048806883 23.89034144065885 18-19 24.244200927885835 26.111955973227563 26.301653362053408 23.34218973683319 20-21 24.84908367599773 25.15937351208692 26.344816172458895 23.646726639456457 22-23 24.70957003221151 25.0389537767099 25.92688761521838 24.324588575860215 24-25 24.439989579905085 25.32205275869869 25.953476205841902 24.284481455554328 26-27 24.208107787684195 25.60174032019782 26.02642252674443 24.163729365373555 28-29 24.221622852203843 25.80290072794732 25.946140730193886 24.02933568965495 30-31 24.659728262756786 25.333026668284305 25.88097251975353 24.12627254920538 32-33 24.37971383724437 25.27082962249434 25.80386150173608 24.545595038525207 34-35 24.634320011625967 25.559510423288973 25.754112493242836 24.052057071842224 36-37 24.535796824161217 25.54522909405929 25.84498534117795 24.07398874060154 38-39 24.354640343728846 25.660856261378644 25.97248163019999 24.012021764692516 40-41 24.594196866227175 25.322749966457238 25.95118917132443 24.131863995991157 42-43 24.415057698675106 25.33903957075673 25.723504152561045 24.522398578007124 44-45 24.41615862461447 25.473188066831202 25.761644465520583 24.349008843033737 46-47 24.454027535153166 25.488146882774977 25.59486712353206 24.4629584585398 48-49 24.2185866397712 25.591998684423515 25.818896985294653 24.37051769051063 50-51 24.25193645428731 25.549689821681547 25.988278121227694 24.210095602803445 52-53 24.475199740656496 25.40510078007005 25.819985980851946 24.299713498421504 54-55 24.197125665765633 25.300908139853668 25.94320331353721 24.558762880843492 56-57 24.19218984266019 25.500080622668946 25.810182675294186 24.497546859376673 58-59 24.23292151100378 25.5510263496442 25.91698170244706 24.29907043690496 60-61 24.31968487639437 25.41570817142511 26.12474057826195 24.13986637391857 62-63 24.24273328619863 25.347149685039827 26.11804474132773 24.292072287433818 64-65 24.159714835730387 25.227556432320508 26.010418406682 24.602310325267105 66-67 24.193135287145363 25.412881281992433 25.804492417995352 24.589491012866855 68-69 24.074679559084462 25.390084016114088 25.974600877837972 24.56063554696347 70-71 24.067365337263507 25.20926095224439 26.065301652386086 24.65807205810602 72-73 24.039279749612525 25.35523078838566 25.990151082565184 24.615338379436626 74-75 23.978718823181147 25.360376731097382 26.018973512087545 24.641930933633923 76-77 24.073541789605894 25.188479386029783 25.91706670885508 24.820912115509245 78-79 23.932454908171604 25.227074894025993 26.040920074704644 24.79955012309776 80-81 23.999932142739038 25.36016959161525 25.963948897469823 24.67594936817589 82-83 23.974600766890035 25.334599100578036 26.12779367621711 24.563006456314817 84-85 24.03087059801638 25.362021812457016 25.982860690017084 24.624246899509515 86-87 23.876564775381677 25.49146901996543 25.94698291570555 24.68498328894734 88-89 23.838510909384922 25.282658736967655 26.033637941264708 24.845192412382715 90-91 23.921616545470712 25.17792849188021 26.050573739124683 24.8498812235244 92-93 23.885086451463263 25.054559667724003 26.287451383803262 24.772902497009472 94-95 23.831855392475884 24.995564673927284 26.295577002630267 24.877002930966565 96-97 23.835393120868076 24.98026126439596 26.229214187833723 24.955131426902245 98-99 23.680629067212507 24.967039216406363 26.17063667197776 25.18169504440337 100-101 23.871194860269153 24.86973260065707 26.221184378737266 25.037888160336507 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 22.5 2 32.0 3 52.0 4 52.5 5 49.5 6 96.5 7 243.5 8 374.0 9 407.5 10 397.0 11 334.5 12 333.5 13 394.0 14 454.0 15 512.5 16 564.0 17 634.0 18 688.5 19 784.0 20 915.0 21 1006.0 22 1060.5 23 1170.0 24 1376.0 25 1632.5 26 1994.0 27 2558.5 28 3470.5 29 4949.0 30 7214.0 31 10436.0 32 14832.0 33 19144.0 34 23215.5 35 28086.5 36 34300.0 37 40661.5 38 46694.0 39 52650.5 40 58647.5 41 64830.0 42 70481.0 43 76354.5 44 82130.0 45 88158.0 46 93362.0 47 97594.5 48 101772.5 49 104714.5 50 105488.0 51 105635.0 52 105126.5 53 103995.0 54 102211.0 55 97754.5 56 91111.0 57 82777.0 58 74852.5 59 66143.0 60 55239.5 61 45404.0 62 37157.0 63 29049.5 64 21645.0 65 16014.0 66 12161.0 67 9438.0 68 7355.5 69 5687.5 70 4334.0 71 3225.0 72 2328.0 73 1776.0 74 1401.0 75 1034.0 76 740.0 77 528.0 78 360.0 79 218.5 80 149.0 81 124.0 82 103.5 83 84.5 84 63.0 85 44.5 86 48.0 87 48.0 88 35.0 89 30.5 90 28.0 91 23.5 92 21.0 93 21.5 94 15.0 95 12.5 96 13.0 97 9.5 98 7.0 99 5.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04432202307317078 2 0.051266092452139506 3 0.04320754280247209 4 0.050237341433033024 5 0.04286462579610326 6 0.01615996392513093 7 0.01273079386144267 8 0.018217465963343886 9 0.019117623105062053 10-11 0.020575020382129567 12-13 0.024389972077982755 14-15 0.04198590096728315 16-17 0.02709044350313726 18-19 0.02258965779454642 20-21 0.025311561532598975 22-23 0.042671734980020797 24-25 0.03829954314881827 26-27 0.03049818125392747 28-29 0.020446426504741256 30-31 0.013073710867811495 32-33 0.00996602549759401 34-35 0.009301623797754408 36-37 0.0013073710867811494 38-39 0.0067297462499882115 40-41 0.003557763941076571 42-43 0.18701836234839855 44-45 0.16307846884127486 46-47 0.1688651933237488 48-49 0.16755782223696766 50-51 0.16556461713744886 52-53 0.1701082674718358 54-55 0.1686508701947683 56-57 0.17902410963742527 58-59 0.17531631950606236 60-61 0.17955991745987657 62-63 0.17743811848296945 64-65 0.17844543718917788 66-67 0.16963675658807864 68-69 0.1675363899240696 70-71 0.1542054913014815 72-73 0.1601422419742418 74-75 0.15994935115815934 76-77 0.1582776307521113 78-79 0.1838463800394869 80-81 0.1932765977146296 82-83 0.1899117245896355 84-85 0.1844250524877343 86-87 0.2004564225354769 88-89 0.19857037900044838 90-91 0.1973058725394633 92-93 0.20322119089932555 94-95 0.21539474462541888 96-97 0.21500896299325398 98-99 0.20491434361827165 100-101 0.21526615074803057 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2332926.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.07676442917526 #Duplication Level Percentage of deduplicated Percentage of total 1 81.86338737489896 55.72994537695318 2 10.79698552778986 14.700476806411297 3 3.1851309319844394 6.505002243983523 4 1.3914725179349499 3.7890778725251573 5 0.7633369599122315 2.5982755200013896 6 0.4663407827527786 1.9048182966706868 7 0.31482059868640755 1.5002377413958545 8 0.22662781669039006 1.2342470791943998 9 0.167656781186176 1.0272178077988579 >10 0.7963504054781514 9.019207778634488 >50 0.020178751022718877 0.9017190912030586 >100 0.0072700576006881614 0.8801158933006055 >500 3.153529016046533E-4 0.11833274703235118 >1k 1.2614116063830731E-4 0.091325744895242 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 4.286462579610326E-5 8 0.0 0.0 0.0 0.0 4.286462579610326E-5 9 0.0 0.0 0.0 0.0 1.7145850318441304E-4 10-11 0.0 0.0 0.0 6.429693869415489E-5 1.7145850318441304E-4 12-13 0.0 0.0 0.0 8.572925159220652E-5 1.7145850318441304E-4 14-15 0.0 0.0 0.0 1.285938773883098E-4 1.9289081608246466E-4 16-17 0.0 0.0 0.0 1.285938773883098E-4 2.143231289805163E-4 18-19 0.0 0.0 0.0 1.285938773883098E-4 2.7862006767467124E-4 20-21 0.0 0.0 0.0 1.285938773883098E-4 3.2148469347077443E-4 22-23 0.0 0.0 0.0 1.285938773883098E-4 3.857816321649293E-4 24-25 0.0 0.0 0.0 2.143231289805163E-4 4.286462579610326E-4 26-27 0.0 0.0 0.0 4.07213945062981E-4 4.286462579610326E-4 28-29 0.0 0.0 0.0 0.0017788819705382855 4.5007857085908426E-4 30-31 0.0 0.0 0.0 0.00747987720142002 4.929431966551876E-4 32-33 0.0 0.0 0.0 0.022653954733240576 5.78672448247394E-4 34-35 0.0 0.0 0.0 0.04704392681122333 6.858340127376522E-4 36-37 0.0 0.0 0.0 0.07906380228091248 6.858340127376522E-4 38-39 0.0 0.0 0.0 0.12182126651252548 7.072663256357037E-4 40-41 0.0 0.0 0.0 0.17293733277437862 7.501309514318071E-4 42-43 0.0 0.0 0.0 0.23466239392076732 7.715632643298587E-4 44-45 0.0 0.0 0.0 0.3194914883712556 7.929955772279103E-4 46-47 0.0 0.0 0.0 0.4168370535542062 8.358602030240136E-4 48-49 0.0 0.0 0.0 0.5048809949394023 9.430217675142718E-4 50-51 0.0 0.0 0.0 0.5930963948277828 9.85886393310375E-4 52-53 0.0 0.0 0.0 0.6945783964000573 0.0010501833320045299 54-55 0.0 0.0 0.0 0.8299020200383553 0.0011144802706986848 56-57 0.0 2.143231289805163E-5 0.0 0.9964525235691145 0.0011359125835967365 58-59 0.0 4.286462579610326E-5 0.0 1.1522225737121539 0.0011573448964947882 60-61 0.0 8.572925159220652E-5 0.0 1.3020130085566366 0.0012002095222908914 62-63 0.0 8.572925159220652E-5 0.0 1.4700852063031575 0.0013288033996792011 64-65 0.0 8.572925159220652E-5 0.0 1.6819221869874998 0.0013288033996792011 66-67 0.0 8.572925159220652E-5 0.0 1.9560200366406821 0.0013502357125772528 68-69 0.0 8.572925159220652E-5 0.0 2.2371691172373236 0.0013716680254753043 70-71 0.0 8.572925159220652E-5 0.0 2.4979146359550195 0.0013716680254753043 72-73 2.143231289805163E-5 8.572925159220652E-5 0.0 2.7611034383430937 0.001457397277067511 74-75 4.286462579610326E-5 8.572925159220652E-5 0.0 3.076865704270088 0.001457397277067511 76-77 4.286462579610326E-5 8.572925159220652E-5 0.0 3.4796645928760706 0.001457397277067511 78-79 4.286462579610326E-5 8.572925159220652E-5 0.0 3.922370448098225 0.001457397277067511 80-81 4.286462579610326E-5 8.572925159220652E-5 0.0 4.340021929542557 0.0015216942157616658 82-83 4.286462579610326E-5 8.572925159220652E-5 0.0 4.743549516787073 0.0016717204060480273 84-85 4.286462579610326E-5 8.572925159220652E-5 0.0 5.198428925735321 0.0017145850318441304 86-87 4.286462579610326E-5 1.0716156449025815E-4 0.0 5.749067908712064 0.0017574496576402338 88-89 4.286462579610326E-5 1.285938773883098E-4 0.0 6.356502520868643 0.0018431789092324402 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2150 0.0 50.553013 1 GTATCAA 3885 0.0 42.63678 1 TCAACGC 4865 0.0 33.466312 4 ATCAACG 5030 0.0 32.461487 3 CAACGCA 5030 0.0 32.46079 5 TATCAAC 5085 0.0 32.11038 2 AACGCAG 5400 0.0 30.402637 6 GTACATG 7870 0.0 26.656157 1 TACATGG 8035 0.0 26.346743 2 ACATGGG 8355 0.0 24.315056 3 ACGCAGA 6625 0.0 23.926178 7 CGCAGAG 6685 0.0 23.499968 8 GTGGTAT 1265 0.0 22.13663 1 CATGGGG 7155 0.0 21.826437 4 GCAGAGT 7580 0.0 19.848639 9 TGGTATC 1370 0.0 19.40195 2 GTAAGTA 1000 0.0 18.036886 2 ATGGGGG 4365 0.0 17.61568 5 CGTATAC 165 0.0014715698 17.260178 3 CAGAGTA 6920 0.0 17.078247 10-11 >>END_MODULE