##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921386_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2332926 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.87046867324553 33.0 31.0 34.0 27.0 34.0 2 31.026693517068264 33.0 31.0 34.0 27.0 34.0 3 31.087448551732887 34.0 31.0 34.0 27.0 34.0 4 34.57440656068817 37.0 35.0 37.0 32.0 37.0 5 34.26848815607524 37.0 35.0 37.0 30.0 37.0 6 34.20559674846095 37.0 35.0 37.0 30.0 37.0 7 34.05287823102833 37.0 35.0 37.0 30.0 37.0 8 34.0109326228093 37.0 35.0 37.0 30.0 37.0 9 35.56665663634423 39.0 37.0 39.0 30.0 39.0 10-11 35.406365868441604 39.0 37.0 39.0 30.0 39.0 12-13 35.32118506973646 39.0 37.0 39.0 29.0 39.0 14-15 36.48804205534166 40.0 37.0 41.0 29.0 41.0 16-17 36.44669762349942 40.0 37.0 41.0 29.0 41.0 18-19 36.39526735953048 40.0 37.0 41.0 28.5 41.0 20-21 36.34970483418677 40.0 37.0 41.0 28.0 41.0 22-23 36.227392982032 40.0 37.0 41.0 27.0 41.0 24-25 36.15002211814691 40.0 37.0 41.0 27.0 41.0 26-27 35.996106177392676 40.0 36.0 41.0 27.0 41.0 28-29 35.8313607032542 40.0 36.0 41.0 27.0 41.0 30-31 35.685215047541156 40.0 36.0 41.0 26.5 41.0 32-33 35.63731897196911 40.0 36.0 41.0 26.5 41.0 34-35 35.77257036871294 40.0 36.0 41.0 27.0 41.0 36-37 35.74250897799587 40.0 36.0 41.0 26.0 41.0 38-39 35.648172938190065 40.0 36.0 41.0 25.5 41.0 40-41 35.52206413748229 40.0 35.0 41.0 25.0 41.0 42-43 35.40850567056135 40.0 35.0 41.0 25.0 41.0 44-45 35.25842418490771 40.0 35.0 41.0 24.0 41.0 46-47 35.097744420525984 40.0 35.0 41.0 24.0 41.0 48-49 34.933663348087336 39.0 35.0 41.0 23.0 41.0 50-51 34.767220863413584 39.0 35.0 41.0 23.0 41.0 52-53 34.58974030895108 39.0 35.0 41.0 22.0 41.0 54-55 34.37132596576145 39.0 34.5 41.0 21.5 41.0 56-57 34.10220169863939 38.0 34.0 40.0 20.0 41.0 58-59 33.865512450887856 38.0 34.0 40.0 19.5 41.0 60-61 33.58514243486506 37.5 34.0 40.0 18.0 41.0 62-63 33.286954879837594 37.0 33.5 40.0 16.0 41.0 64-65 32.96778337589791 36.5 33.0 39.5 13.5 41.0 66-67 32.6353251239002 36.0 33.0 39.0 12.0 41.0 68-69 32.27415786012929 35.5 33.0 39.0 8.0 40.5 70-71 31.895306152016822 35.0 32.0 38.0 7.0 40.0 72-73 31.506127498257555 35.0 32.0 37.0 2.0 39.5 74-75 31.105904773661916 35.0 32.0 37.0 2.0 39.0 76-77 28.43178137669176 32.0 27.5 34.5 2.0 36.0 78-79 30.053771101183663 34.5 30.5 35.0 2.0 37.0 80-81 30.26343270210885 35.0 31.0 35.0 2.0 37.0 82-83 30.117858003211417 35.0 31.0 35.0 2.0 37.0 84-85 29.90035024685738 35.0 31.0 35.0 2.0 36.0 86-87 29.662936801253018 34.5 31.0 35.0 2.0 36.0 88-89 29.38752000706409 34.0 31.0 35.0 2.0 35.5 90-91 29.2076752541658 34.0 31.0 35.0 2.0 35.0 92-93 29.066149547821063 34.0 30.0 35.0 2.0 35.0 94-95 28.966696543310846 34.0 30.0 35.0 2.0 35.0 96-97 28.769218354975685 34.0 30.0 35.0 2.0 35.0 98-99 28.491424502963234 34.0 30.0 35.0 2.0 35.0 100-101 27.40520595166756 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69362.0 3 20617.0 4 10995.0 5 7389.0 6 6467.0 7 6289.0 8 6499.0 9 7024.0 10 7475.0 11 8123.0 12 8401.0 13 8737.0 14 9477.0 15 10245.0 16 10895.0 17 11538.0 18 10716.0 19 9692.0 20 9159.0 21 9008.0 22 9598.0 23 10727.0 24 12590.0 25 14939.0 26 18444.0 27 21853.0 28 26190.0 29 31675.0 30 38327.0 31 47473.0 32 60508.0 33 79985.0 34 115918.0 35 174604.0 36 303612.0 37 556049.0 38 512127.0 39 50197.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.07585296981959 20.249333766544243 14.208530964350663 26.466282299285503 2 15.55400671175174 21.356127056058003 35.6492691786227 27.44059705356756 3 18.050547861174497 24.26904332520719 28.217518954697766 29.462889858920548 4 13.955380470543352 17.532701626990335 32.9524805654922 35.559437336974106 5 15.321262936931616 36.42530590090007 33.01774630387164 15.23568485829668 6 34.756740537528394 33.92652921256805 16.41021904067898 14.906511209224572 7 29.687881093477074 31.023200488656943 19.989498162178382 19.2994202556876 8 27.200098075525013 34.17529114028229 19.04405511433 19.580555669862694 9 26.61734662822567 15.611853955076157 19.031808124218255 38.738991292479916 10-11 26.23594217336193 25.211922534288256 26.70767721919366 21.84445807315615 12-13 26.67076881663047 22.595366413722186 26.59562703098216 24.138237738665186 14-15 24.126422775989877 24.346586677211903 23.95656306832004 27.570427478478187 16-17 24.285102545220113 27.10154904450299 24.876121019048213 23.737227391228682 18-19 24.16895475006542 26.429961929692848 26.22862630766886 23.172457012572867 20-21 24.804573682039084 25.430915218637644 26.18008605123424 23.58442504808903 22-23 24.662874136891563 25.24506310654954 25.803933654804634 24.28812910175426 24-25 24.355425340617558 25.62704279446782 25.788473120307604 24.229058744607023 26-27 24.129870024097077 25.91431402416481 25.9322748451415 24.023541106596618 28-29 24.157330102830805 26.022692394087017 25.88570897013157 23.93426853295061 30-31 24.596766068801955 25.57422492442914 25.81591020068345 24.013098806085452 32-33 24.37647769972927 25.560909630690283 25.642706942268163 24.419905727312287 34-35 24.574505002967634 25.820225831779137 25.653356642861997 23.95191252239123 36-37 24.451389024329867 25.80617506556713 25.82900059132043 23.91343531878258 38-39 24.3951357097543 25.860681034926188 25.868203796101024 23.87597945921849 40-41 24.55714917386167 25.616107430883297 25.85607538371617 23.97066801153887 42-43 24.437128251294087 25.552797693684425 25.63375451456987 24.376319540451618 44-45 24.4230046241937 25.682708379148732 25.573630221401437 24.32065677525613 46-47 24.437116257037186 25.7391925013852 25.465753703598516 24.357937537979097 48-49 24.175788608169064 25.848839990843047 25.717873289394827 24.257498111593062 50-51 24.27681413486152 25.76021241558643 25.790755300905293 24.172218148646756 52-53 24.536302767394808 25.605303316072835 25.56466684955934 24.293727066973013 54-55 24.140924938322513 25.588671446265522 25.73338394269968 24.537019672712283 56-57 24.221791551247133 25.753731362477783 25.54691927362639 24.477557812648694 58-59 24.20480899897544 25.752622486292765 25.75017897638369 24.292389538348104 60-61 24.308567472476124 25.67952596669807 25.896330400096883 24.115576160728928 62-63 24.200528568712325 25.62998775361727 25.86599803517689 24.30348564249351 64-65 24.104206454224332 25.45127344482282 25.806563649944387 24.637956451008456 66-67 24.096369010329234 25.734235688659112 25.55607153837347 24.613323762638185 68-69 24.034924716946264 25.65956547333976 25.704649125703 24.600860684010975 70-71 23.944515067513343 25.48157273917618 25.795828124152425 24.778084069158055 72-73 23.980479853127274 25.63684972235198 25.659080429067643 24.723589995453104 74-75 23.917812812046733 25.62529395901102 25.634726372126703 24.82216685681554 76-77 23.96111268865965 25.422812841121008 25.677666881604672 24.938407588614673 78-79 23.829044483485113 25.454005023435837 25.74429373374418 24.972656759334875 80-81 23.91359307845726 25.57741886994424 25.64314247612668 24.86584557547182 82-83 23.761965754709397 25.55112409228543 25.800262600819956 24.886647552185217 84-85 23.805059371311135 25.50018501946885 25.75012209569816 24.944633513521858 86-87 23.655990547229855 25.64527188832553 25.63793651123889 25.060801053205722 88-89 23.591582432117118 25.480129412457302 25.688368477435542 25.23991967799004 90-91 23.579119200076352 25.421750095226958 25.777808636375752 25.221322068320934 92-93 23.511054799375863 25.32003951351292 25.883945459001513 25.2849602281097 94-95 23.386620748012813 25.242978351103663 25.955506230439457 25.414894670444067 96-97 23.31836008291624 25.224786305916858 25.896171221908542 25.560682389258353 98-99 23.190156121036402 25.21917449150768 25.747315092386025 25.843354295069894 100-101 23.14821621656377 25.242354716301758 25.807361462219113 25.802067604915358 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 17.0 2 27.5 3 43.5 4 42.5 5 41.5 6 65.0 7 191.5 8 290.5 9 303.0 10 308.0 11 251.0 12 205.5 13 246.0 14 288.0 15 314.5 16 374.5 17 415.5 18 460.0 19 527.5 20 598.0 21 681.5 22 803.0 23 961.0 24 1183.5 25 1480.0 26 1930.0 27 2684.5 28 3770.0 29 5380.5 30 7582.5 31 10909.5 32 15566.5 33 19759.0 34 23793.5 35 28772.0 36 34868.0 37 41256.0 38 47019.5 39 52843.5 40 58799.5 41 64710.5 42 70695.5 43 76630.0 44 82393.0 45 88282.5 46 93635.5 47 98510.5 48 103091.5 49 105571.5 50 106089.0 51 106176.0 52 105515.5 53 104696.5 54 102646.0 55 97766.0 56 91030.5 57 82600.0 58 74196.0 59 65139.0 60 54549.5 61 44981.5 62 36810.0 63 28522.5 64 20875.0 65 15481.5 66 11745.0 67 9123.5 68 7024.0 69 5288.0 70 3919.0 71 2878.0 72 2081.5 73 1547.5 74 1198.0 75 862.5 76 616.5 77 404.5 78 230.0 79 127.0 80 75.5 81 37.0 82 22.5 83 17.5 84 14.0 85 11.0 86 6.0 87 6.0 88 9.0 89 8.0 90 5.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.13017986854276561 2 1.285938773883098E-4 3 0.005443807476105115 4 0.003900680947445397 5 0.023704138065245104 6 0.0011144802706986848 7 4.286462579610326E-5 8 0.001285938773883098 9 0.0 10-11 0.08840829070446299 12-13 1.285938773883098E-4 14-15 0.005079458156838237 16-17 1.7145850318441304E-4 18-19 2.3575544187856795E-4 20-21 5.786724482473941E-4 22-23 2.786200676746712E-4 24-25 0.0013288033996792011 26-27 0.00302195611862528 28-29 0.006944069378968728 30-31 0.014874025151247831 32-33 0.01418819113851018 34-35 0.0111662350198849 36-37 4.929431966551875E-4 38-39 2.571877547766196E-4 40-41 0.0049079996536538235 42-43 0.008615789785016755 44-45 0.008358602030240136 46-47 0.009794566994409596 48-49 0.011659178216540087 50-51 0.0060224799243525085 52-53 0.00197177278662075 54-55 0.0010501833320045299 56-57 0.005658130605085631 58-59 0.009258759171958305 60-61 0.007651335704604432 62-63 0.017167282631339358 64-65 0.032062740095485244 66-67 0.03459175301745533 68-69 0.025504452348681438 70-71 0.0388139186583715 72-73 0.0242828105134925 74-75 0.023275491807284072 76-77 0.219595477953437 78-79 0.06232516590753414 80-81 0.05107320163605704 82-83 0.020939369701396444 84-85 0.03167695846332031 86-87 0.07533457983665148 88-89 0.2483147772368262 90-91 0.2959373764962969 92-93 0.04567225878574803 94-95 0.0045007857085908425 96-97 0.009023003730079738 98-99 0.0010501833320045299 100-101 0.0014359649641694592 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2332926.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.71679749834121 #Duplication Level Percentage of deduplicated Percentage of total 1 82.26419581852907 56.529320854257506 2 10.58135850598454 14.542341394261799 3 3.0911581518823485 6.372434662747381 4 1.379062536136414 3.7905904413293925 5 0.7336680664058399 2.520765997510483 6 0.4545975858536798 1.874309415020526 7 0.31994651922291495 1.5389990120218129 8 0.21700089953936688 1.1929285496483648 9 0.17317259209332136 1.0709879348825648 >10 0.7593538140331882 8.678608923592908 >50 0.01977867001897953 0.9084152098671426 >100 0.0063940573967311435 0.8157438324261632 >500 1.8766974218674556E-4 0.07698950011232737 >1k 1.2511316145717304E-4 0.0875642723216408 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.286462579610326E-5 0.0 3 0.0 0.0 0.0 4.286462579610326E-5 0.0 4 0.0 0.0 0.0 4.286462579610326E-5 0.0 5 0.0 0.0 0.0 4.286462579610326E-5 0.0 6 0.0 4.286462579610326E-5 0.0 4.286462579610326E-5 4.286462579610326E-5 7 0.0 4.286462579610326E-5 0.0 4.286462579610326E-5 4.286462579610326E-5 8 0.0 4.286462579610326E-5 0.0 4.286462579610326E-5 8.572925159220652E-5 9 0.0 4.286462579610326E-5 0.0 4.286462579610326E-5 8.572925159220652E-5 10-11 0.0 4.286462579610326E-5 0.0 6.429693869415489E-5 8.572925159220652E-5 12-13 0.0 4.286462579610326E-5 0.0 8.572925159220652E-5 1.0716156449025815E-4 14-15 0.0 4.286462579610326E-5 0.0 8.572925159220652E-5 1.7145850318441304E-4 16-17 0.0 4.286462579610326E-5 0.0 1.0716156449025815E-4 1.7145850318441304E-4 18-19 0.0 4.286462579610326E-5 0.0 1.285938773883098E-4 2.571877547766196E-4 20-21 0.0 6.429693869415489E-5 0.0 1.285938773883098E-4 2.571877547766196E-4 22-23 0.0 8.572925159220652E-5 0.0 1.285938773883098E-4 3.0005238057272284E-4 24-25 0.0 8.572925159220652E-5 0.0 2.143231289805163E-4 3.8578163216492937E-4 26-27 0.0 8.572925159220652E-5 0.0 3.857816321649293E-4 3.8578163216492937E-4 28-29 0.0 8.572925159220652E-5 0.0 0.0017360173447421821 4.07213945062981E-4 30-31 0.0 8.572925159220652E-5 0.0 0.007008366317662883 4.286462579610326E-4 32-33 0.0 8.572925159220652E-5 0.0 0.021603771401236045 4.286462579610326E-4 34-35 0.0 8.572925159220652E-5 0.0 0.04541507103097141 5.143755095532392E-4 36-37 0.0 8.572925159220652E-5 0.0 0.07649192473314628 5.143755095532392E-4 38-39 0.0 8.572925159220652E-5 0.0 0.11854212263912356 6.001047611454457E-4 40-41 0.0 8.572925159220652E-5 0.0 0.16745066067247738 6.001047611454457E-4 42-43 0.0 8.572925159220652E-5 0.0 0.22701105821616288 6.001047611454457E-4 44-45 0.0 8.572925159220652E-5 0.0 0.3089682227383123 6.001047611454457E-4 46-47 0.0 8.572925159220652E-5 0.0 0.4031632379252492 6.001047611454457E-4 48-49 0.0 8.572925159220652E-5 0.0 0.48891392183035376 6.858340127376522E-4 50-51 0.0 8.572925159220652E-5 0.0 0.5738073132195363 7.286986385337554E-4 52-53 0.0 8.572925159220652E-5 0.0 0.672010170918409 8.14427890125962E-4 54-55 2.143231289805163E-5 8.572925159220652E-5 0.0 0.8023400656514609 9.001571417181685E-4 56-57 4.286462579610326E-5 8.572925159220652E-5 0.0 0.9630181154481539 9.215894546162201E-4 58-59 4.286462579610326E-5 8.572925159220652E-5 0.0 1.1137944366859471 0.0010073187062084267 60-61 4.286462579610326E-5 8.572925159220652E-5 0.0 1.2585911426251841 0.0010716156449025816 62-63 4.286462579610326E-5 8.572925159220652E-5 0.0 1.4217553407180512 0.0010716156449025816 64-65 4.286462579610326E-5 8.572925159220652E-5 0.0 1.6270340336555895 0.0010716156449025816 66-67 4.286462579610326E-5 8.572925159220652E-5 0.0 1.8926875520269395 0.0010716156449025816 68-69 4.286462579610326E-5 8.572925159220652E-5 0.0 2.165606624470729 0.0010716156449025816 70-71 4.286462579610326E-5 8.572925159220652E-5 0.0 2.4204153925156646 0.0010716156449025816 72-73 4.286462579610326E-5 8.572925159220652E-5 0.0 2.6773030949117116 0.0011573448964947882 74-75 4.286462579610326E-5 8.572925159220652E-5 0.0 2.9872786363562325 0.0011573448964947882 76-77 4.286462579610326E-5 8.572925159220652E-5 0.0 3.383497804902513 0.0011573448964947882 78-79 4.286462579610326E-5 8.572925159220652E-5 0.0 3.8183594336039803 0.0011573448964947882 80-81 4.286462579610326E-5 8.572925159220652E-5 0.0 4.228316714717913 0.0012002095222908914 82-83 4.286462579610326E-5 8.572925159220652E-5 0.0 4.6240643723804356 0.001285938773883098 84-85 4.286462579610326E-5 8.572925159220652E-5 0.0 5.072021144262613 0.001285938773883098 86-87 4.286462579610326E-5 1.0716156449025815E-4 0.0 5.615887516363571 0.001285938773883098 88-89 4.286462579610326E-5 1.285938773883098E-4 0.0 6.216142303699303 0.001285938773883098 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2410 0.0 46.740055 1 GTATCAA 3855 0.0 38.960148 1 TCAACGC 4975 0.0 30.05175 4 CAACGCA 5135 0.0 29.255474 5 ATCAACG 5165 0.0 29.038157 3 TATCAAC 5115 0.0 28.765265 2 AACGCAG 5575 0.0 27.115324 6 GTACATG 7110 0.0 25.067995 1 TACATGG 7430 0.0 23.63552 2 ACATGGG 7750 0.0 22.047182 3 ACGCAGA 6930 0.0 21.127592 7 GTGGTAT 1340 0.0 20.926912 1 CGCAGAG 6985 0.0 20.416784 8 CATGGGG 6735 0.0 19.94349 4 ACGATAG 120 0.0047481935 19.803717 1 TGGTATC 1370 0.0 18.707918 2 GTAAGTA 1145 0.0 17.409893 2 GCAGAGT 7735 0.0 17.207994 9 TAAGTAC 1575 0.0 16.875622 3 ATGGGGG 4115 0.0 16.405106 5 >>END_MODULE