##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921385_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3989650 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.204012131389973 31.0 31.0 34.0 26.0 34.0 2 30.255104081811687 31.0 31.0 34.0 26.0 34.0 3 30.304661812439686 31.0 31.0 34.0 26.0 34.0 4 33.76840224079807 37.0 35.0 37.0 28.0 37.0 5 33.76003609339165 37.0 35.0 37.0 28.0 37.0 6 33.80289925181407 37.0 35.0 37.0 29.0 37.0 7 33.71347486621634 37.0 35.0 37.0 28.0 37.0 8 33.681776596944594 37.0 35.0 37.0 28.0 37.0 9 35.21261288584212 39.0 35.0 39.0 28.0 39.0 10-11 35.10250473099144 39.0 35.0 39.0 28.0 39.0 12-13 34.98204366297796 39.0 35.0 39.0 27.0 39.0 14-15 36.08677916609226 40.0 36.0 41.0 27.0 41.0 16-17 36.03135124634993 40.0 36.0 41.0 27.0 41.0 18-19 35.98891406514356 40.0 36.0 41.0 27.0 41.0 20-21 35.92913137743912 40.0 36.0 41.0 27.0 41.0 22-23 35.811712806887826 40.0 36.0 41.0 27.0 41.0 24-25 35.711556402190666 40.0 36.0 41.0 27.0 41.0 26-27 35.55909327885905 40.0 36.0 41.0 25.5 41.0 28-29 35.41172057699297 40.0 35.5 41.0 25.0 41.0 30-31 35.25399207950572 39.0 35.0 41.0 24.5 41.0 32-33 35.06527602671913 39.0 35.0 41.0 24.0 41.0 34-35 34.895152456982444 39.0 35.0 41.0 24.0 41.0 36-37 34.716167834271175 39.0 35.0 41.0 23.0 41.0 38-39 34.93218064241224 39.0 35.0 41.0 24.0 41.0 40-41 35.0441542491196 40.0 35.0 41.0 23.5 41.0 42-43 34.867767222688705 40.0 35.0 41.0 22.0 41.0 44-45 34.73429887333475 40.0 35.0 41.0 20.5 41.0 46-47 34.56451267655058 39.0 35.0 41.0 18.5 41.0 48-49 34.40386662990488 39.0 35.0 41.0 17.5 41.0 50-51 32.6934744902435 37.0 32.0 39.5 13.5 40.0 52-53 32.84728986251927 37.5 32.5 39.5 13.0 40.0 54-55 33.70019450327723 38.5 34.0 40.0 11.5 41.0 56-57 33.71668918326169 38.5 34.0 41.0 10.0 41.0 58-59 33.53738410637524 38.0 34.0 40.5 8.0 41.0 60-61 33.292251074655674 37.5 33.0 40.0 7.5 41.0 62-63 33.00076648327547 37.0 33.0 40.0 4.0 41.0 64-65 32.71377526850726 37.0 33.0 40.0 2.0 41.0 66-67 32.37803491534345 36.0 32.5 39.0 2.0 41.0 68-69 32.01595340443397 35.5 32.0 39.0 2.0 41.0 70-71 31.63300652939481 35.0 32.0 39.0 2.0 40.5 72-73 31.277031318536714 35.0 32.0 37.5 2.0 40.0 74-75 30.88598009850488 35.0 31.0 37.0 2.0 39.0 76-77 30.514363039364355 35.0 31.0 36.5 2.0 39.0 78-79 30.17325391951675 35.0 31.0 36.0 2.0 38.5 80-81 29.82958292080759 35.0 31.0 36.0 2.0 37.0 82-83 29.528366147406416 35.0 30.0 35.0 2.0 37.0 84-85 29.294061133182108 35.0 30.0 35.0 2.0 36.5 86-87 29.06868898274285 35.0 30.0 35.0 2.0 36.0 88-89 28.86690311180179 34.5 30.0 35.0 2.0 36.0 90-91 28.61255486070207 34.0 30.0 35.0 2.0 35.5 92-93 28.415150326469742 34.0 29.5 35.0 2.0 35.0 94-95 28.200793929292043 34.0 29.0 35.0 2.0 35.0 96-97 27.947035328913564 34.0 29.0 35.0 2.0 35.0 98-99 27.71489165716291 34.0 29.0 35.0 2.0 35.0 100-101 26.66630230721993 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 150610.0 3 25187.0 4 17212.0 5 13064.0 6 11839.0 7 12130.0 8 13037.0 9 13691.0 10 15042.0 11 16143.0 12 16392.0 13 16644.0 14 17949.0 15 19462.0 16 20539.0 17 22432.0 18 20352.0 19 18056.0 20 17885.0 21 18659.0 22 20504.0 23 23176.0 24 27243.0 25 31851.0 26 37592.0 27 44316.0 28 52262.0 29 61650.0 30 73293.0 31 88540.0 32 110698.0 33 143341.0 34 198810.0 35 286306.0 36 465564.0 37 828666.0 38 860145.0 39 159346.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.53310930270467 17.87756893330491 12.651527880528143 24.937793883462277 2 16.00927463245068 19.437302180466588 39.425890720853126 25.127532466229603 3 19.497977852804937 23.566146294268247 29.130179534370736 27.805696318556084 4 13.388389624792435 15.258119941925802 36.37770598897052 34.975784444311245 5 14.205412058438958 37.301654573386486 34.20421334662783 14.28872002154672 6 33.83233435358042 34.86046163569282 16.934806386618074 14.372397624108684 7 29.209939444016047 31.86772443266995 20.66301231676024 18.259323806553766 8 26.956333603089462 34.90912527815467 19.63358293296109 18.500958185794783 9 27.195857183542653 15.57838178251818 19.23177589962254 37.993985134316624 10-11 25.923082756766348 25.195126063376723 27.51901433212139 21.36277684773555 12-13 26.30585440219369 22.628796559934322 27.537561785004165 23.527787252867817 14-15 23.466328877385173 24.23441666715774 24.79915133075996 27.500103124697127 16-17 23.59235889490528 27.36750538335087 25.672738651023845 23.36739707072 18-19 23.626727304749615 26.69208017414228 27.069998502015384 22.61119401909272 20-21 23.971542085463753 25.90460985070664 27.231104786907245 22.892743276922364 22-23 23.904484675348904 25.617151291527723 26.933755759501953 23.544608273621417 24-25 23.688027310436553 25.85946930810652 26.872314080050636 23.580189301406296 26-27 23.421568271025635 26.094240680171648 26.92131315651244 23.562877892290278 28-29 23.490926430203483 26.39436597826234 26.70060804675447 23.414099544779706 30-31 23.95683839176646 26.02187886282456 26.599947307030803 23.42133543837818 32-33 23.595690242307306 26.097486935589515 26.547970018597372 23.7588528035058 34-35 23.987362143181585 26.152011238106887 26.642663194698596 23.21796342401293 36-37 23.98815822915847 25.96127286754632 26.699227943811994 23.351340959483217 38-39 23.81048528600792 26.185692084022662 26.58756955933223 23.41625307063719 40-41 23.939097898430074 25.999973681027843 26.6444125135433 23.41651590699878 42-43 23.71341712407495 25.999577206905215 26.44671293441645 23.84029273460338 44-45 23.57347498092843 26.11468055516314 26.66385380662215 23.64799065728628 46-47 23.849736781297405 26.09284738338507 26.34006701025749 23.71734882506003 48-49 23.618188517234547 26.251536141423713 26.326808013026024 23.803467328315712 50-51 23.723810270096227 26.26850441202546 26.435547056498137 23.572138261380175 52-53 23.97300916468235 26.086837490742955 26.39025896629235 23.549894378282353 54-55 23.379253729412707 26.019909875482593 26.748468507342032 23.852367887762664 56-57 23.519969214078582 26.20318733255791 26.472250156711542 23.80459329665197 58-59 23.621241779746825 26.103223848850575 26.57745594074912 23.698078430653478 60-61 23.719816908208436 26.127581479213273 26.658396454719146 23.494205157859145 62-63 23.6808022958623 26.054846994844354 26.728383665216054 23.535967044077292 64-65 23.393304959543677 25.915660088748577 26.762427683447576 23.92860726826017 66-67 23.41230566946903 26.068933298923824 26.585126175527428 23.933634856079713 68-69 23.487872197986025 25.982313096197736 26.68391462736657 23.845900078449674 70-71 23.4221821996071 25.894739406151334 26.59822113091957 24.084857263321993 72-73 23.410559154086318 26.13558396653634 26.395599858558988 24.05825702081835 74-75 23.29648613241762 26.22175198263038 26.5510550317192 23.930706853232802 76-77 23.336682599328423 25.825666059010533 26.588567911286056 24.249083430374988 78-79 23.252757471961814 25.848323687399134 26.675530735715636 24.223388104923416 80-81 23.44159294369755 25.98454235653068 26.419280728441137 24.15458397133063 82-83 23.431742173736918 26.030039535621313 26.524639892980623 24.01357839766115 84-85 23.33254244751987 26.114844407555974 26.440120795770966 24.112492349153186 86-87 23.18045097763579 26.228575685478194 26.43389785624006 24.15707548064596 88-89 23.071802471691697 25.95968467005691 26.565704772070692 24.402808086180706 90-91 23.241158527316905 25.772243090846647 26.611248053171316 24.37535032866513 92-93 23.33181575721395 25.624159711318832 26.72722900902028 24.316795522446935 94-95 23.23614547535141 25.54448850075114 26.74796736731397 24.471398656583485 96-97 23.125396081127466 25.362673364803722 26.82345574219007 24.68847481187874 98-99 22.864318041199876 25.376637489439354 26.803564081545485 24.95548038781529 100-101 23.049295071246707 25.276207814365936 26.91970351719966 24.754793597187696 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 117.0 1 98.5 2 159.0 3 247.0 4 216.5 5 246.0 6 435.0 7 797.0 8 1193.5 9 1333.0 10 1160.0 11 1003.5 12 1059.0 13 1177.5 14 1296.5 15 1458.0 16 1641.0 17 1827.0 18 2071.0 19 2348.5 20 2655.5 21 2913.0 22 3244.0 23 3811.5 24 4546.0 25 5698.0 26 7516.5 27 10323.0 28 14084.0 29 18760.5 30 25148.5 31 33023.5 32 43558.0 33 51693.0 34 57186.5 35 64508.0 36 74551.0 37 84938.0 38 93765.0 39 102292.5 40 109196.5 41 115892.5 42 122344.0 43 129773.5 44 137755.5 45 147508.5 46 154734.0 47 159174.5 48 164878.0 49 168906.0 50 169716.0 51 168342.5 52 167191.0 53 165668.0 54 162465.5 55 154577.0 56 143156.5 57 129665.5 58 116287.0 59 101518.0 60 84136.5 61 69232.5 62 57184.5 63 44186.5 64 31548.5 65 22987.0 66 17004.0 67 12729.0 68 9628.5 69 7285.5 70 5546.5 71 4075.5 72 2897.0 73 2175.5 74 1674.5 75 1245.0 76 908.0 77 584.0 78 396.0 79 282.0 80 200.5 81 149.5 82 112.0 83 97.5 84 84.0 85 65.5 86 61.0 87 64.0 88 53.5 89 42.5 90 44.5 91 40.0 92 29.0 93 23.0 94 22.0 95 16.5 96 11.5 97 11.0 98 8.5 99 8.0 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05263619615755768 2 0.06090759841088818 3 0.0515584073790934 4 0.05857656686676776 5 0.051032045417517824 6 0.01872344691890266 7 0.015389821162257341 8 0.021605905279911772 9 0.021706164701164262 10-11 0.02211973481383079 12-13 0.028110235233667114 14-15 0.0441016129234394 16-17 0.029965034526838196 18-19 0.02399959896231499 20-21 0.027408419284899677 22-23 0.04742270625242816 24-25 0.043211810559823545 26-27 0.03120574486483777 28-29 0.020352662514255635 30-31 0.01260762222250072 32-33 0.00944945045304726 34-35 0.00917373704460291 36-37 0.001102853633777399 38-39 0.006266213828280676 40-41 0.003321093328988758 42-43 0.22506986828418532 44-45 0.19895228904791146 46-47 0.2047798679082125 48-49 0.2025992254959708 50-51 0.2013209178750016 52-53 0.20614590252277767 54-55 0.20449162207211158 56-57 0.21579587181832996 58-59 0.21247477848934118 60-61 0.21796398180291507 62-63 0.2149311343100272 64-65 0.21627210406927927 66-67 0.20534382715275776 68-69 0.20343889814896043 70-71 0.186908626069956 72-73 0.1949544446254684 74-75 0.19439048538092313 76-77 0.19257328337072174 78-79 0.2201822214981264 80-81 0.227964859072851 82-83 0.2271502512751745 84-85 0.2226135124634993 86-87 0.23970774378704898 88-89 0.2381537227576354 90-91 0.23708846640682768 92-93 0.24109884325692732 94-95 0.25116238266514607 96-97 0.25155088792249947 98-99 0.2421891644630481 100-101 0.2504605667163787 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3989650.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.91618660124023 #Duplication Level Percentage of deduplicated Percentage of total 1 76.37243020244514 41.177101979852274 2 12.520318517937945 13.500956590402117 3 4.3276746867135865 6.999951478749408 4 2.072459392593438 4.469564293382431 5 1.11068458941848 2.9941938789104325 6 0.7237468737640793 2.341300289875701 7 0.4980444130977978 1.8796858858600225 8 0.35435461372741434 1.528435958139014 9 0.2846413891842026 1.3812100428322542 >10 1.602541033346716 15.784946126737697 >50 0.09487592636783347 3.4755972609072963 >100 0.0359841448718992 3.1455893982488354 >500 0.0012623718502692268 0.4570759882343963 >1k 9.818446811401106E-4 0.8643908278680014 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.012971062624541E-5 2 0.0 0.0 0.0 0.0 7.519456593936812E-5 3 0.0 0.0 0.0 0.0 7.519456593936812E-5 4 0.0 0.0 0.0 5.012971062624541E-5 7.519456593936812E-5 5 0.0 0.0 0.0 5.012971062624541E-5 7.519456593936812E-5 6 0.0 0.0 0.0 5.012971062624541E-5 1.2532427656561352E-4 7 0.0 0.0 0.0 5.012971062624541E-5 1.5038913187873624E-4 8 0.0 0.0 0.0 5.012971062624541E-5 2.0051884250498164E-4 9 0.0 0.0 0.0 7.519456593936812E-5 2.0051884250498164E-4 10-11 0.0 0.0 0.0 7.519456593936812E-5 2.13051270161543E-4 12-13 0.0 1.2532427656561352E-5 0.0 8.772699359592947E-5 3.7597282969684055E-4 14-15 0.0 2.5064855313122705E-5 0.0 1.1279184890905217E-4 4.135701126665246E-4 16-17 0.0 2.5064855313122705E-5 0.0 1.5038913187873624E-4 4.511673956362087E-4 18-19 0.0 2.5064855313122705E-5 0.0 1.5038913187873624E-4 4.762322509493314E-4 20-21 0.0 3.759728296968406E-5 0.0 1.629215595352976E-4 4.887646786058928E-4 22-23 0.0 5.012971062624541E-5 0.0 2.882458361009111E-4 5.764916722018221E-4 24-25 0.0 5.012971062624541E-5 0.0 4.26102540323086E-4 7.394132317371198E-4 26-27 0.0 5.012971062624541E-5 0.0 5.639592445452608E-4 7.895429423633651E-4 28-29 0.0 5.012971062624541E-5 0.0 0.0026067449525647613 8.020753700199266E-4 30-31 0.0 5.012971062624541E-5 0.0 0.010965874199491183 8.14607797676488E-4 32-33 0.0 5.012971062624541E-5 0.0 0.0268820573233241 9.273996465855401E-4 34-35 0.0 5.012971062624541E-5 0.0 0.04774854937149875 9.273996465855401E-4 36-37 0.0 5.012971062624541E-5 0.0 0.08136052034639629 9.273996465855401E-4 38-39 0.0 5.012971062624541E-5 0.0 0.1367789154437106 9.775293572117855E-4 40-41 0.0 5.012971062624541E-5 0.0 0.20110786660484004 9.775293572117855E-4 42-43 0.0 5.012971062624541E-5 0.0 0.26974797287982655 9.775293572117855E-4 44-45 0.0 5.012971062624541E-5 0.0 0.35217374957703057 9.90061784868347E-4 46-47 1.2532427656561352E-5 5.012971062624541E-5 0.0 0.44808441843269464 0.0010025942125249081 48-49 2.5064855313122705E-5 5.012971062624541E-5 0.0 0.5501359768400736 0.0010527239231511536 50-51 2.5064855313122705E-5 5.012971062624541E-5 0.0 0.6636296416978933 0.0010527239231511536 52-53 2.5064855313122705E-5 5.012971062624541E-5 0.0 0.7841038687604176 0.001140450916747083 54-55 2.5064855313122705E-5 5.012971062624541E-5 0.0 0.9224493376611984 0.0012281779103430126 56-57 2.5064855313122705E-5 5.012971062624541E-5 0.0 1.083541162758638 0.001240710337999574 58-59 2.5064855313122705E-5 5.012971062624541E-5 0.0 1.2570024939531037 0.001278307620969258 60-61 2.5064855313122705E-5 5.012971062624541E-5 0.0 1.4432844986402316 0.0013284373315955035 62-63 2.5064855313122705E-5 5.012971062624541E-5 0.0 1.6382514756933566 0.001353502186908626 64-65 2.5064855313122705E-5 5.012971062624541E-5 0.0 1.8546489040392014 0.0013785670422217487 66-67 2.5064855313122705E-5 5.012971062624541E-5 0.0 2.109257704309902 0.0013910994698783101 68-69 2.5064855313122705E-5 5.012971062624541E-5 0.0 2.387590390134473 0.0014036318975348715 70-71 2.5064855313122705E-5 6.266213828280676E-5 0.0 2.6772649229882317 0.0014788264634742396 72-73 2.5064855313122705E-5 7.519456593936812E-5 0.0 2.983971025027258 0.0015790858847267303 74-75 2.5064855313122705E-5 7.519456593936812E-5 0.0 3.3071447370070057 0.0016166831676964143 76-77 2.5064855313122705E-5 7.519456593936812E-5 0.0 3.6745453861867583 0.0016292155953529757 78-79 2.5064855313122705E-5 7.519456593936812E-5 0.0 4.078039427017408 0.0016417480230095371 80-81 5.012971062624541E-5 7.519456593936812E-5 0.0 4.508327798177785 0.001742007444262028 82-83 5.012971062624541E-5 8.772699359592947E-5 0.0 4.95601117892547 0.0019049290037973256 84-85 5.012971062624541E-5 1.0025942125249082E-4 0.0 5.419924053488401 0.0019049290037973256 86-87 5.012971062624541E-5 1.0025942125249082E-4 0.0 5.92655997393255 0.0019299938591104482 88-89 5.012971062624541E-5 1.0025942125249082E-4 0.0 6.482924567317935 0.0019299938591104482 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3470 0.0 54.016125 1 GTATCAA 6835 0.0 44.987545 1 TCAACGC 8090 0.0 37.188396 4 CAACGCA 8355 0.0 35.66675 5 ATCAACG 8645 0.0 34.910282 3 TATCAAC 8710 0.0 34.65193 2 AACGCAG 8795 0.0 34.08496 6 GTACATG 11405 0.0 31.163221 1 TACATGG 11880 0.0 29.52001 2 ACGCAGA 10575 0.0 27.59109 7 ACATGGG 12570 0.0 26.954058 3 CGCAGAG 10750 0.0 26.660145 8 CATGGGG 10750 0.0 23.837023 4 GCAGAGT 12380 0.0 22.153442 9 ATGGGGG 7040 0.0 22.108107 5 AGAGTAC 10325 0.0 19.370775 10-11 GAGTACA 8705 0.0 18.969954 1 CAGAGTA 11645 0.0 18.254839 10-11 GAGTACT 5835 0.0 17.768694 12-13 AGTACAT 9085 0.0 17.080923 2 >>END_MODULE