##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921385_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3989650 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43808053338012 33.0 31.0 34.0 29.0 34.0 2 31.555292820172195 34.0 31.0 34.0 29.0 34.0 3 31.632040153898213 34.0 31.0 34.0 28.0 34.0 4 35.13290012908401 37.0 35.0 37.0 33.0 37.0 5 34.881719699723035 37.0 35.0 37.0 32.0 37.0 6 34.8437745165616 37.0 35.0 37.0 32.0 37.0 7 34.708802275888864 37.0 35.0 37.0 32.0 37.0 8 34.67214317045355 37.0 35.0 37.0 32.0 37.0 9 36.29291917837404 39.0 37.0 39.0 32.0 39.0 10-11 36.14569410850576 39.0 37.0 39.0 32.0 39.0 12-13 36.07899439800484 39.0 37.0 39.0 32.0 39.0 14-15 37.31716115448724 40.0 38.0 41.0 32.0 41.0 16-17 37.29855651498252 40.0 38.0 41.0 31.5 41.0 18-19 37.26679545824822 40.0 38.0 41.0 31.0 41.0 20-21 37.23392565763915 40.0 38.0 41.0 31.0 41.0 22-23 37.126127730502674 40.0 38.0 41.0 31.0 41.0 24-25 37.05967465817804 40.0 37.0 41.0 31.0 41.0 26-27 36.923729525146314 40.0 37.0 41.0 30.0 41.0 28-29 36.765868559898735 40.0 37.0 41.0 30.0 41.0 30-31 36.62166017069167 40.0 37.0 41.0 30.0 41.0 32-33 36.5584635243693 40.0 36.5 41.0 30.0 41.0 34-35 36.68075257228078 40.0 37.0 41.0 30.0 41.0 36-37 36.65023774015265 40.0 37.0 41.0 30.0 41.0 38-39 36.55741242966175 40.0 37.0 41.0 30.0 41.0 40-41 36.42810609953254 40.0 37.0 41.0 30.0 41.0 42-43 36.31384745529057 40.0 36.0 41.0 29.5 41.0 44-45 36.16246249671023 40.0 36.0 41.0 29.0 41.0 46-47 35.986610855588836 40.0 36.0 41.0 28.0 41.0 48-49 35.813240259170605 40.0 35.5 41.0 27.5 41.0 50-51 35.65115260737157 40.0 35.0 41.0 27.0 41.0 52-53 35.47666599827052 39.0 35.0 41.0 27.0 41.0 54-55 35.26562743599062 39.0 35.0 41.0 26.0 41.0 56-57 35.00064416678155 39.0 35.0 41.0 26.0 41.0 58-59 34.77335894126051 38.5 35.0 40.5 26.0 41.0 60-61 34.49975398844511 38.0 34.0 40.0 25.5 41.0 62-63 34.20063100773251 37.5 34.0 40.0 24.5 41.0 64-65 33.887376336270094 37.0 34.0 40.0 23.5 41.0 66-67 33.5535461757297 36.5 34.0 39.0 23.0 41.0 68-69 33.18953078590854 36.0 34.0 39.0 22.0 41.0 70-71 32.80730903713358 35.0 33.0 39.0 22.0 40.0 72-73 32.414360156906 35.0 33.0 37.5 20.5 40.0 74-75 32.011759427518705 35.0 33.0 37.0 19.5 39.0 76-77 29.260213301918714 33.0 29.0 34.5 12.5 36.5 78-79 30.918362513002393 34.5 31.5 36.0 15.5 37.5 80-81 31.113738423169952 35.0 32.0 36.0 17.5 37.0 82-83 30.953308811549885 35.0 32.0 35.0 16.0 37.0 84-85 30.72279849109571 35.0 32.0 35.0 11.0 36.5 86-87 30.480234105748625 35.0 32.0 35.0 7.0 36.0 88-89 30.20008033286128 35.0 32.0 35.0 2.0 36.0 90-91 30.012658253230235 34.5 31.0 35.0 2.0 35.0 92-93 29.86434536864136 34.0 31.0 35.0 2.0 35.0 94-95 29.761748023009538 34.0 31.0 35.0 2.0 35.0 96-97 29.570001378567042 34.0 31.0 35.0 2.0 35.0 98-99 29.308027521211134 34.0 31.0 35.0 2.0 35.0 100-101 28.23171042572657 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 70815.0 3 23889.0 4 13170.0 5 9258.0 6 8118.0 7 8347.0 8 8815.0 9 9500.0 10 10601.0 11 11588.0 12 12775.0 13 13893.0 14 15407.0 15 17136.0 16 19226.0 17 21580.0 18 19426.0 19 16194.0 20 15239.0 21 14597.0 22 15486.0 23 17532.0 24 20492.0 25 24689.0 26 29535.0 27 35738.0 28 42454.0 29 51407.0 30 62228.0 31 77761.0 32 98638.0 33 130448.0 34 188667.0 35 280776.0 36 489355.0 37 947378.0 38 1000857.0 39 136634.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.449108218309405 19.306095787139242 13.316098362845166 25.92869763170619 2 15.077884259173388 20.696213541178423 38.11105167937542 26.114850520272764 3 18.064389825227476 24.639634908583012 29.05357931115215 28.242395955037363 4 12.996273701698616 16.359241625855187 35.418633296252494 35.2258513761937 5 13.922452687183451 37.654490765592236 34.220097896280485 14.202958650943826 6 33.79942711221041 35.503778312276985 16.640465288353855 14.05632928715875 7 28.98753096454996 32.046451273961104 20.715061472918755 18.25095628857018 8 26.89012840272742 35.43245528262912 19.341119828592497 18.33629648605096 9 26.882959658115375 15.6191395235171 19.222212474778487 38.27568834358904 10-11 25.851350540961604 25.50806028900967 27.453434445650792 21.187154724377937 12-13 26.2089377008797 22.772925069160394 27.654206307889012 23.363930922070892 14-15 23.333576058766457 24.365856828507717 24.84718010908106 27.45338700364477 16-17 23.526153329431565 27.58364466011387 25.64483807456553 23.24536393588903 18-19 23.542278172111455 26.84316372786878 27.113162924538457 22.501395175481306 20-21 23.85715449447003 25.963129366795123 27.301638625184072 22.878077513550775 22-23 23.733277020887826 25.67712164866799 27.044799725288843 23.544801605155346 24-25 23.540484709380284 25.981853006570983 26.95704178866657 23.520620495382165 26-27 23.284636596733645 26.225603328491104 27.021418802169816 23.468341272605432 28-29 23.389204781876753 26.552478119494783 26.750452950772498 23.307864147855966 30-31 23.833474511581336 26.138824636561065 26.667096176104216 23.360604675753383 32-33 23.512756645804597 26.196046785983057 26.632854172589116 23.658342395623226 34-35 23.79768336787283 26.26700454958734 26.779719905453614 23.155592177086213 36-37 23.832400453477113 26.080811767144567 26.862904384054907 23.223883395323412 38-39 23.722890598397928 26.34541749271144 26.639917416200866 23.29177449268976 40-41 23.85960743411939 26.091908688132925 26.685057578443054 23.36342629930463 42-43 23.636007914615202 26.110559709484942 26.48294067535426 23.77049170054559 44-45 23.51507873035282 26.208716745319936 26.658615218615488 23.617589305711753 46-47 23.733779393992872 26.19613299900509 26.380338571270652 23.689749035731396 48-49 23.520894636973612 26.403996196223623 26.346114822457224 23.72899434434554 50-51 23.6676994388539 26.357197635899617 26.394333318001127 23.580769607245355 52-53 23.91577531578742 26.185644867562225 26.31761329890875 23.580966517741608 54-55 23.273603184271145 26.15942410411043 26.67475016354982 23.89222254806861 56-57 23.472216408237482 26.320410244789787 26.37371369243121 23.833659654541524 58-59 23.5383835797368 26.239076848376925 26.499474029279142 23.723065542607138 60-61 23.635747905609612 26.29322543263346 26.55389465995312 23.5171320018038 62-63 23.592668579943485 26.221418672699304 26.595901496326867 23.59001125103034 64-65 23.256811350736374 26.070901358039006 26.644656384475795 24.027630906748822 66-67 23.318573536397448 26.255476000003508 26.4459253971436 23.980025066455443 68-69 23.367217360455598 26.143263120815423 26.51883302558162 23.970686493147355 70-71 23.338192050643666 26.032159810592777 26.445949005785074 24.183699132978486 72-73 23.28511139508419 26.351268514764804 26.24862703863296 24.11499305151805 74-75 23.177078142888426 26.41893679882378 26.285597598916638 24.118387459371156 76-77 23.211478997303846 25.999932913384523 26.43938793388174 24.34920015542989 78-79 23.110685208721016 26.07053124174626 26.489272552196248 24.329510997336477 80-81 23.32247438554782 26.27901727776461 26.163443465132875 24.235064871554698 82-83 23.299513911355852 26.266573724990327 26.279685169890353 24.154227193763464 84-85 23.18775245149045 26.334874473158344 26.158387218902867 24.318985856448343 86-87 23.045834797159202 26.49813510361253 26.11559836539828 24.340431733829988 88-89 22.934186692185676 26.288833892566853 26.181351488821026 24.59562792642645 90-91 23.013239933452713 26.12648686963347 26.295910142804107 24.564363054109712 92-93 23.086479848185846 26.04752794164374 26.366423933550458 24.499568276619954 94-95 22.971567395883582 25.98262176937404 26.31655531579618 24.729255518946193 96-97 22.814106832019124 25.796986174727067 26.423224513287824 24.965682479965988 98-99 22.550014600516093 25.865873267520307 26.361363399952626 25.222748732010974 100-101 22.570215632984034 25.973511650156674 26.386748255402853 25.06952446145644 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 102.0 1 94.5 2 135.0 3 194.0 4 175.5 5 182.5 6 320.5 7 683.0 8 1078.0 9 1177.0 10 980.5 11 792.0 12 791.5 13 863.0 14 962.5 15 1066.5 16 1211.0 17 1386.0 18 1496.5 19 1672.0 20 1929.5 21 2281.5 22 2737.0 23 3366.5 24 4241.0 25 5574.0 26 7717.5 27 10746.5 28 14527.5 29 19649.0 30 26320.5 31 34135.0 32 44957.5 33 52900.0 34 58029.0 35 65598.5 36 75572.0 37 85735.0 38 94278.5 39 103001.0 40 109967.0 41 116374.5 42 122726.0 43 130677.0 44 139393.0 45 148581.0 46 155956.5 47 160745.0 48 166341.5 49 170266.5 50 171369.5 51 169921.0 52 167883.5 53 166621.0 54 163189.0 55 154923.5 56 142726.0 57 128351.5 58 115050.5 59 100125.5 60 82574.0 61 67794.5 62 55809.5 63 42710.5 64 30093.0 65 21495.5 66 15769.5 67 11667.0 68 8668.5 69 6555.5 70 4946.0 71 3487.5 72 2395.0 73 1826.0 74 1442.0 75 1000.0 76 653.0 77 394.0 78 215.5 79 110.5 80 71.0 81 48.0 82 32.5 83 21.0 84 17.5 85 12.5 86 9.0 87 9.5 88 8.5 89 6.0 90 4.5 91 1.5 92 0.0 93 0.0 94 0.5 95 1.5 96 1.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1573070319451581 2 3.0077826375747243E-4 3 0.0073440026067449525 4 0.004210895692604614 5 0.02864912962289925 6 9.524645018986628E-4 7 1.7545398719185894E-4 8 0.0023310315441204114 9 0.0 10-11 0.10645044051483213 12-13 2.7571340844434976E-4 14-15 0.005802514004987907 16-17 1.2532427656561352E-4 18-19 2.13051270161543E-4 20-21 6.266213828280676E-4 22-23 1.2532427656561352E-4 24-25 0.001591618312383292 26-27 0.0023686288270900954 28-29 0.006366473249533168 30-31 0.015114107753812993 32-33 0.014838394345368641 34-35 0.012457233090621984 36-37 8.271402253330493E-4 38-39 1.3785670422217488E-4 40-41 0.0044991415287055254 42-43 0.00805835098316895 44-45 0.007657313298158987 46-47 0.008948153346784806 48-49 0.011442106450440515 50-51 0.005652124873109171 52-53 0.001491358891130801 54-55 0.0010025942125249081 56-57 0.005689722156078854 58-59 0.009010815485067613 60-61 0.00759465115987618 62-63 0.017094231323549685 64-65 0.03415086536412969 66-67 0.03638163748699761 68-69 0.026192773802213225 70-71 0.04083064930507689 72-73 0.02529043901094081 74-75 0.02382414497512313 76-77 0.24364292607120924 78-79 0.07070795683831915 80-81 0.05401476319977943 82-83 0.019262341308134798 84-85 0.03158171769453461 86-87 0.08109733936560852 88-89 0.26052410612459737 90-91 0.3165315253217701 92-93 0.05371398493602196 94-95 0.0058526437156141515 96-97 0.010878147205895253 98-99 0.001629215595352976 100-101 0.0011780481997167671 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3989650.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.63484478621928 #Duplication Level Percentage of deduplicated Percentage of total 1 75.30983402075513 39.63921424558383 2 13.059609610845454 13.747810496709361 3 4.482561259317839 7.078167483867423 4 2.159266762165424 4.546106835144774 5 1.2072991131924753 3.1773000716713065 6 0.7388860325530748 2.333469098288188 7 0.517179762316766 1.9055173561281735 8 0.3909400755477026 1.6461656157732933 9 0.28462947342594674 1.3483285339822229 >10 1.7095619083717724 16.406085125938475 >50 0.10042244392917483 3.598595264437428 >100 0.037467672110921675 3.246293338331198 >500 0.00133820890908669 0.46309428188183666 >1k 0.0010036565592472918 0.8638522522624457 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 2.5064855313122705E-5 6 0.0 0.0 0.0 0.0 5.012971062624541E-5 7 0.0 0.0 0.0 0.0 5.012971062624541E-5 8 0.0 0.0 0.0 0.0 7.519456593936812E-5 9 0.0 0.0 0.0 2.5064855313122705E-5 7.519456593936812E-5 10-11 0.0 0.0 0.0 8.772699359592947E-5 7.519456593936812E-5 12-13 0.0 0.0 0.0 1.1279184890905217E-4 1.1279184890905217E-4 14-15 0.0 0.0 0.0 1.629215595352976E-4 1.629215595352976E-4 16-17 0.0 0.0 0.0 2.2558369781810434E-4 1.7545398719185894E-4 18-19 0.0 0.0 0.0 2.2558369781810434E-4 2.0051884250498164E-4 20-21 0.0 2.5064855313122705E-5 0.0 2.631809807877884E-4 2.3811612547466567E-4 22-23 0.0 2.5064855313122705E-5 0.0 3.7597282969684055E-4 2.8824583610091107E-4 24-25 0.0 2.5064855313122705E-5 0.0 5.263619615755768E-4 3.509079743837179E-4 26-27 0.0 2.5064855313122705E-5 0.0 6.892835211108743E-4 3.7597282969684055E-4 28-29 0.0 2.5064855313122705E-5 0.0 0.002844861078039427 3.7597282969684055E-4 30-31 0.0 2.5064855313122705E-5 0.0 0.011354379456844586 3.7597282969684055E-4 32-33 0.0 2.5064855313122705E-5 0.0 0.027884651535849007 4.26102540323086E-4 34-35 0.0 2.5064855313122705E-5 0.0 0.04956575138170015 5.012971062624541E-4 36-37 0.0 2.5064855313122705E-5 0.0 0.0840173950095873 5.138295339190155E-4 38-39 0.0 2.5064855313122705E-5 0.0 0.14040078703645684 5.263619615755768E-4 40-41 0.0 2.5064855313122705E-5 0.0 0.20579499454839395 5.263619615755768E-4 42-43 0.0 2.5064855313122705E-5 0.0 0.2754000977529357 5.388943892321381E-4 44-45 0.0 2.5064855313122705E-5 0.0 0.3590540523604827 5.639592445452609E-4 46-47 0.0 2.5064855313122705E-5 0.0 0.45659393681149973 5.890240998583836E-4 48-49 0.0 2.5064855313122705E-5 0.0 0.55969821914203 6.266213828280676E-4 50-51 0.0 2.5064855313122705E-5 0.0 0.6748837617334854 6.266213828280676E-4 52-53 0.0 2.5064855313122705E-5 0.0 0.7959595453235246 7.268808040805585E-4 54-55 0.0 3.759728296968406E-5 0.0 0.9354705299963656 7.770105147068038E-4 56-57 0.0 5.012971062624541E-5 0.0 1.0979283897083705 8.020753700199266E-4 58-59 0.0 5.012971062624541E-5 0.0 1.2725677691025528 8.271402253330493E-4 60-61 0.0 5.012971062624541E-5 0.0 1.4609802864912962 8.271402253330493E-4 62-63 0.0 5.012971062624541E-5 0.0 1.657952451969471 8.772699359592946E-4 64-65 0.0 5.012971062624541E-5 0.0 1.8772824683869511 9.148672189289787E-4 66-67 0.0 5.012971062624541E-5 0.0 2.1328312007318937 9.399320742421015E-4 68-69 0.0 5.012971062624541E-5 0.0 2.413946085496222 9.524645018986628E-4 70-71 0.0 5.012971062624541E-5 0.0 2.705901520183475 9.90061784868347E-4 72-73 0.0 5.012971062624541E-5 0.0 3.016630531500257 0.001140450916747083 74-75 0.0 5.012971062624541E-5 0.0 3.3460077951700025 0.0011780481997167671 76-77 0.0 5.012971062624541E-5 0.0 3.7193112177759957 0.0011780481997167671 78-79 0.0 6.266213828280676E-5 0.0 4.129447445264622 0.0011905806273733285 80-81 0.0 7.519456593936812E-5 0.0 4.566816638050957 0.001240710337999574 82-83 0.0 7.519456593936812E-5 0.0 5.022082137530861 0.0014036318975348715 84-85 0.0 7.519456593936812E-5 0.0 5.494003233366335 0.0014036318975348715 86-87 0.0 7.519456593936812E-5 0.0 6.009775293572117 0.001416164325191433 88-89 0.0 7.519456593936812E-5 0.0 6.576165829082751 0.001453761608161117 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3355 0.0 52.281796 1 GTATCAA 6625 0.0 46.4232 1 TCAACGC 8535 0.0 34.643803 4 CAACGCA 8650 0.0 34.08442 5 TATCAAC 8905 0.0 33.310955 2 ATCAACG 9000 0.0 32.85387 3 AACGCAG 9205 0.0 32.181103 6 GTACATG 12030 0.0 28.805708 1 TACATGG 12450 0.0 27.218855 2 ACATGGG 13040 0.0 25.586962 3 ACGCAGA 11450 0.0 25.248133 7 CGCAGAG 11825 0.0 24.367035 8 CATGGGG 10570 0.0 23.887882 4 ATGGGGG 6445 0.0 21.10199 5 GCAGAGT 13115 0.0 21.100166 9 AGAGTAC 11260 0.0 19.382307 10-11 CGTATAC 245 1.7738239E-7 19.37202 3 GAGTACA 9090 0.0 19.035057 1 ACCGTAT 365 1.1641532E-10 18.237545 8 TATACCG 425 3.6379788E-12 17.902403 5 >>END_MODULE