##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921383_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3860672 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.468026550818095 33.0 31.0 34.0 30.0 34.0 2 31.599524383319796 34.0 31.0 34.0 29.0 34.0 3 31.67651149851632 34.0 31.0 34.0 29.0 34.0 4 35.1722948750891 37.0 35.0 37.0 33.0 37.0 5 34.92772993924374 37.0 35.0 37.0 32.0 37.0 6 34.88520210989175 37.0 35.0 37.0 32.0 37.0 7 34.75587851026972 37.0 35.0 37.0 32.0 37.0 8 34.71688892503688 37.0 35.0 37.0 32.0 37.0 9 36.339875026938316 39.0 37.0 39.0 32.0 39.0 10-11 36.19464810789417 39.0 37.0 39.0 32.0 39.0 12-13 36.13106150949886 39.0 37.0 39.0 32.0 39.0 14-15 37.38417353248346 40.0 38.0 41.0 32.0 41.0 16-17 37.364057993012615 40.0 38.0 41.0 32.0 41.0 18-19 37.32612703177064 40.0 38.0 41.0 31.5 41.0 20-21 37.29241593173416 40.0 38.0 41.0 31.0 41.0 22-23 37.18694595137841 40.0 38.0 41.0 31.0 41.0 24-25 37.121841223496844 40.0 37.5 41.0 31.0 41.0 26-27 36.99020882892927 40.0 37.0 41.0 30.5 41.0 28-29 36.8436280005139 40.0 37.0 41.0 30.0 41.0 30-31 36.71521680681498 40.0 37.0 41.0 30.0 41.0 32-33 36.67029211494786 40.0 37.0 41.0 30.0 41.0 34-35 36.80039045015997 40.0 37.0 41.0 30.0 41.0 36-37 36.77823614645326 40.0 37.0 41.0 30.0 41.0 38-39 36.699169211992114 40.0 37.0 41.0 30.0 41.0 40-41 36.58430332853969 40.0 37.0 41.0 30.0 41.0 42-43 36.49358246439998 40.0 37.0 41.0 30.0 41.0 44-45 36.374613927316275 40.0 36.5 41.0 29.5 41.0 46-47 36.23744739257829 40.0 36.0 41.0 29.0 41.0 48-49 36.09537368105863 40.0 36.0 41.0 28.5 41.0 50-51 35.95495253157999 40.0 35.5 41.0 28.0 41.0 52-53 35.796102466099164 39.5 35.0 41.0 28.0 41.0 54-55 35.59930602755168 39.0 35.0 41.0 28.0 41.0 56-57 35.34568165852991 39.0 35.0 41.0 27.0 41.0 58-59 35.130394397659266 39.0 35.0 41.0 26.5 41.0 60-61 34.865808076935835 38.0 35.0 40.0 26.0 41.0 62-63 34.57713993833198 38.0 34.0 40.0 26.0 41.0 64-65 34.273621664829335 37.0 34.0 40.0 26.0 41.0 66-67 33.94576669553902 37.0 34.0 39.5 26.0 41.0 68-69 33.58290447880576 36.0 34.0 39.0 25.0 41.0 70-71 33.20057233559339 36.0 33.5 39.0 24.0 40.5 72-73 32.80347087242843 35.0 33.0 38.0 23.0 40.0 74-75 32.393429434046716 35.0 33.0 37.0 22.0 39.0 76-77 29.61018017070603 33.0 29.0 34.5 17.5 36.5 78-79 31.266599830288612 34.5 31.5 36.0 20.0 38.0 80-81 31.45607642918124 35.0 32.0 36.0 20.0 37.0 82-83 31.28040908422161 35.0 32.0 35.5 20.0 37.0 84-85 31.041078988321203 35.0 32.0 35.0 19.5 36.5 86-87 30.789047347197588 35.0 32.0 35.0 18.0 36.0 88-89 30.503669568406742 35.0 32.0 35.0 13.5 36.0 90-91 30.317059439392935 35.0 32.0 35.0 9.0 35.5 92-93 30.169176376547917 34.0 32.0 35.0 7.0 35.0 94-95 30.069602390464667 34.0 32.0 35.0 2.0 35.0 96-97 29.878906703288962 34.0 31.5 35.0 2.0 35.0 98-99 29.61797920154833 34.0 31.0 35.0 2.0 35.0 100-101 28.543348023349303 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65373.0 3 21853.0 4 12069.0 5 8677.0 6 7481.0 7 7637.0 8 8188.0 9 8437.0 10 9525.0 11 10481.0 12 11337.0 13 12123.0 14 13669.0 15 14366.0 16 15174.0 17 16163.0 18 15291.0 19 14129.0 20 13764.0 21 13507.0 22 14399.0 23 16325.0 24 19405.0 25 23164.0 26 28201.0 27 33847.0 28 40887.0 29 49430.0 30 60030.0 31 75116.0 32 94868.0 33 125218.0 34 181191.0 35 267466.0 36 459299.0 37 902810.0 38 1024001.0 39 145768.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.65228665350651 19.678884480549417 13.884219819471106 25.784609046472973 2 14.686937110785664 20.651846755815452 38.74638598250766 25.91483015089122 3 17.715984415203597 24.75227494146376 29.50630616441852 28.02543447891413 4 12.911057762047056 16.885747234575167 36.03698768665841 34.16620731671937 5 13.776446254546812 37.810711184890145 34.64030865590571 13.772533904657328 6 33.26809349880214 35.960013749062 17.00161657678921 13.770276175346646 7 28.591920975251927 32.305712178008754 20.97947399721913 18.122892849520188 8 26.48622815913091 35.77606560646739 19.587861456588946 18.149844777812746 9 26.5694745809731 15.852347946768838 19.434549071910038 38.14362840034802 10-11 25.590201782387535 25.679052778113792 27.849750152763292 20.880995286735374 12-13 25.984361492360442 22.888001735453436 27.824732154131578 23.302904618054544 14-15 23.02916954575862 24.64259648654722 25.027279868460845 27.300954099233316 16-17 23.319691913460066 27.787441475485398 25.848722831292044 23.044143779762493 18-19 23.338838000255656 27.17440926928752 27.08324618294239 22.403506547514436 20-21 23.894997392924036 26.233530286503793 27.052292012193814 22.81918030837836 22-23 23.725483796686632 26.06451330484598 26.730008151453855 23.47999474701353 24-25 23.502407519220395 26.248396303903032 26.6825631059109 23.566633070965672 26-27 23.311161596204474 26.522443525144308 26.705319235325682 23.461075643325536 28-29 23.411489711627144 26.836263015647464 26.41081504087075 23.34143223185464 30-31 23.853608752459955 26.350486732077222 26.350007467460845 23.445897048001978 32-33 23.549592829530365 26.419565633019644 26.21035871518896 23.820482822261035 34-35 23.841890206987166 26.56477360835254 26.349810151881087 23.243526032779208 36-37 23.841922187573417 26.380553705690996 26.475783956195897 23.30174015053969 38-39 23.798169978251156 26.467334833161495 26.320507777870883 23.413987410716473 40-41 23.969316812613336 26.25419782045548 26.28915456359051 23.48733080334067 42-43 23.711911170771778 26.241318470781543 26.175365918798576 23.871404439648106 44-45 23.616284625669678 26.281360413673355 26.37437034375595 23.727984616901022 46-47 23.76911364991947 26.241721007253975 26.141780523392306 23.847384819434254 48-49 23.566010818630055 26.394120708472347 26.278958072821744 23.76091040007585 50-51 23.718731061908606 26.352407192909723 26.31697082237118 23.611890922810495 52-53 23.97445114474978 26.19027051081521 26.184468309164615 23.650810035270393 54-55 23.300436352747912 26.10190336415898 26.60582266454405 23.99183761854906 56-57 23.484045760169554 26.218532824633723 26.316086686164486 23.981334729032234 58-59 23.600897129326043 26.158591285214438 26.42925586603988 23.811255719419645 60-61 23.66754801272309 26.225040365165842 26.517161639143062 23.59024998296801 62-63 23.609406290722468 26.231835998725376 26.42371572836058 23.73504198219157 64-65 23.296931115973493 25.98869053718977 26.515413473488756 24.198964873347983 66-67 23.352993099280933 26.183165033592793 26.305676344446976 24.158165522679298 68-69 23.494210960091678 26.098546981685505 26.38589384812654 24.021348210096278 70-71 23.39186340337654 25.895562156742148 26.33984012471397 24.372734315167342 72-73 23.3381787345484 26.20516994507437 26.148209168469823 24.308442151907407 74-75 23.310696453575655 26.322183472853943 26.171744494947735 24.195375578622663 76-77 23.29950188917547 25.884066867282012 26.329764789799203 24.486666453743307 78-79 23.140094633613895 26.034184380930558 26.397811884425632 24.42790910102992 80-81 23.444600475331967 26.12378197965488 26.094366910613047 24.337250634400107 82-83 23.398059296272418 26.16981034555791 26.22317976283512 24.208950595334557 84-85 23.25883856671765 26.20565364597436 26.094872780139816 24.440635007168172 86-87 23.111729240372856 26.39583618220786 25.99353081353487 24.498903763884417 88-89 22.979092633323646 26.162776353273028 26.11679484612362 24.74133616727971 90-91 22.996551036410633 26.10628316842103 26.19481674498133 24.702349050187 92-93 23.126822550331674 25.926824830949226 26.26589823677164 24.680454381947463 94-95 22.95278218642233 25.97548330242605 26.268802433692677 24.80293207745894 96-97 22.81211377347733 25.82575246738114 26.305330693446855 25.056803065694677 98-99 22.54572299084666 25.812199489070707 26.245006459467245 25.397071060615385 100-101 22.604807228676922 25.921123880637413 26.23718681710351 25.236882073582155 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 15.0 2 22.5 3 29.0 4 36.0 5 43.0 6 64.5 7 157.5 8 241.0 9 273.5 10 261.0 11 238.5 12 255.0 13 289.5 14 331.0 15 359.5 16 410.5 17 473.0 18 564.0 19 651.0 20 727.0 21 859.5 22 1079.0 23 1362.0 24 1711.0 25 2269.5 26 3258.5 27 4929.5 28 7593.5 29 11676.0 30 17626.5 31 25972.0 32 37146.0 33 46094.5 34 53461.5 35 63164.0 36 75535.0 37 88032.5 38 98519.5 39 108612.5 40 116913.5 41 124757.5 42 132660.0 43 139986.0 44 147125.0 45 155531.0 46 161136.0 47 164810.0 48 169926.0 49 172594.0 50 171656.5 51 168492.0 52 164539.5 53 160424.5 54 155581.0 55 146553.5 56 133686.0 57 118586.0 58 104544.0 59 89407.0 60 71893.5 61 58916.5 62 48534.5 63 36255.0 64 25115.5 65 17900.5 66 13182.5 67 9844.5 68 7276.0 69 5338.5 70 3945.5 71 2875.5 72 2020.5 73 1416.5 74 1033.0 75 735.5 76 481.0 77 258.5 78 133.0 79 73.5 80 48.5 81 38.0 82 27.0 83 19.0 84 10.0 85 7.0 86 5.5 87 4.5 88 4.5 89 5.0 90 4.0 91 2.5 92 2.5 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15823670076090382 2 2.590222634815908E-4 3 0.006294241002602655 4 0.0037299205941349074 5 0.02846654675662683 6 0.0011656001856671584 7 2.072178107852726E-4 8 0.0019944714288082487 9 2.5902226348159075E-5 10-11 0.1091908351706646 12-13 2.460711503075112E-4 14-15 0.0058150498151617125 16-17 9.065779221855677E-5 18-19 2.2016892395935217E-4 20-21 6.47555658703977E-4 22-23 2.849244898297498E-4 24-25 0.0015282313545413855 26-27 0.0032766316330421234 28-29 0.007006552227177031 30-31 0.015321166884936092 32-33 0.01600757588316231 34-35 0.012458970873464517 36-37 7.511645640966132E-4 38-39 1.9426669761119308E-4 40-41 0.004830765213931668 42-43 0.008314614657759064 44-45 0.008586588034414734 46-47 0.009700383767385573 48-49 0.012407166420768197 50-51 0.005996365399598826 52-53 0.0017743025048488968 54-55 8.806756958374087E-4 56-57 0.006229485436732259 58-59 0.009298899258989109 60-61 0.007485743414617973 62-63 0.018183362896407672 64-65 0.03464422774066277 66-67 0.037208548149130515 68-69 0.02722323989191519 70-71 0.04148241549657676 72-73 0.02586337300863684 74-75 0.025060403991843908 76-77 0.24661509706082255 78-79 0.07098505130712994 80-81 0.05453713757604894 82-83 0.020294394343782638 84-85 0.032403685161547006 86-87 0.08170857301526781 88-89 0.2644876332410523 90-91 0.3215631889992209 92-93 0.05356580408799297 94-95 0.005206347495979975 96-97 0.010490401671004426 98-99 0.0015411824677154652 100-101 0.0012562579778857153 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3860672.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.4743971669298 #Duplication Level Percentage of deduplicated Percentage of total 1 74.19303590796123 40.416209050705646 2 13.745004989922204 14.975017217649084 3 4.850548998130202 7.926921978053944 4 2.3480763194805956 5.116401680225949 5 1.2472180646189575 3.3970726102911297 6 0.80583630306132 2.6338468094695653 7 0.5286952881687967 2.0160249975594007 8 0.389801683739174 1.6987369389076583 9 0.28336754377243933 1.3892648511309504 >10 1.5078274951786863 14.383628852935699 >50 0.07467158589519153 2.743844595987209 >100 0.023909371264925608 2.1774216784486486 >500 0.0010987696059618246 0.4328283566028521 >1k 9.076792002964246E-4 0.6927803820323584 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.1804452696318156E-5 2 0.0 0.0 0.0 2.5902226348159078E-5 5.1804452696318156E-5 3 0.0 0.0 0.0 2.5902226348159078E-5 5.1804452696318156E-5 4 0.0 0.0 0.0 2.5902226348159078E-5 1.0360890539263631E-4 5 0.0 0.0 0.0 2.5902226348159078E-5 1.0360890539263631E-4 6 2.5902226348159078E-5 0.0 0.0 2.5902226348159078E-5 1.0360890539263631E-4 7 2.5902226348159078E-5 0.0 0.0 2.5902226348159078E-5 1.0360890539263631E-4 8 2.5902226348159078E-5 0.0 0.0 2.5902226348159078E-5 1.0360890539263631E-4 9 2.5902226348159078E-5 0.0 0.0 5.1804452696318156E-5 1.0360890539263631E-4 10-11 2.5902226348159078E-5 0.0 0.0 1.0360890539263631E-4 1.0360890539263631E-4 12-13 2.5902226348159078E-5 0.0 0.0 1.295111317407954E-4 1.0360890539263631E-4 14-15 2.5902226348159078E-5 0.0 0.0 1.295111317407954E-4 1.0360890539263631E-4 16-17 5.1804452696318156E-5 0.0 0.0 1.5541335808895446E-4 1.0360890539263631E-4 18-19 5.1804452696318156E-5 0.0 0.0 1.5541335808895446E-4 1.0360890539263631E-4 20-21 5.1804452696318156E-5 0.0 0.0 1.68364471263034E-4 1.0360890539263631E-4 22-23 5.1804452696318156E-5 0.0 0.0 2.0721781078527262E-4 1.4246224491487494E-4 24-25 5.1804452696318156E-5 0.0 0.0 3.496800557001475E-4 2.0721781078527262E-4 26-27 6.475556587039769E-5 0.0 0.0 5.30995640137261E-4 2.3312003713343168E-4 28-29 7.770667904447723E-5 0.0 0.0 0.002020373655156408 2.3312003713343168E-4 30-31 7.770667904447723E-5 0.0 0.0 0.009169388127248313 2.3312003713343168E-4 32-33 7.770667904447723E-5 0.0 0.0 0.026964217628433595 2.3312003713343168E-4 34-35 1.0360890539263631E-4 0.0 0.0 0.05227069277058502 2.849244898297498E-4 36-37 1.295111317407954E-4 0.0 0.0 0.09236733915753527 2.849244898297498E-4 38-39 1.295111317407954E-4 2.5902226348159078E-5 0.0 0.1604513411136714 2.9787560300382934E-4 40-41 1.295111317407954E-4 2.5902226348159078E-5 0.0 0.2366038865772591 3.108267161779089E-4 42-43 1.295111317407954E-4 2.5902226348159078E-5 0.0 0.3170562016146412 3.108267161779089E-4 44-45 1.295111317407954E-4 2.5902226348159078E-5 0.0 0.41798422658024303 3.237778293519885E-4 46-47 1.295111317407954E-4 2.5902226348159078E-5 0.0 0.534065053959518 3.36728942526068E-4 48-49 1.295111317407954E-4 2.5902226348159078E-5 0.0 0.6601829940487045 3.626311688742271E-4 50-51 1.8131558443711354E-4 2.5902226348159078E-5 0.0 0.7943176731926462 3.626311688742271E-4 52-53 1.8131558443711354E-4 2.5902226348159078E-5 0.0 0.933658699832568 4.4033784791870433E-4 54-55 1.8131558443711354E-4 2.5902226348159078E-5 0.0 1.0949389121893804 5.309956401372612E-4 56-57 1.8131558443711354E-4 2.5902226348159078E-5 0.0 1.2787929148086137 5.568978664854201E-4 58-59 1.8131558443711354E-4 2.5902226348159078E-5 0.0 1.4744842348689553 5.828000928335792E-4 60-61 1.8131558443711354E-4 2.5902226348159078E-5 0.0 1.6857039396250189 5.957512060076588E-4 62-63 2.0721781078527262E-4 2.5902226348159078E-5 0.0 1.9133456558858146 5.957512060076588E-4 64-65 2.0721781078527262E-4 2.5902226348159078E-5 0.0 2.161566690980223 5.957512060076588E-4 66-67 2.0721781078527262E-4 2.5902226348159078E-5 0.0 2.4496383013112744 6.087023191817384E-4 68-69 2.0721781078527262E-4 2.5902226348159078E-5 0.0 2.7656584138719893 6.216534323558178E-4 70-71 2.0721781078527262E-4 2.5902226348159078E-5 0.0 3.097336422260166 6.605067718780564E-4 72-73 2.460711503075112E-4 2.5902226348159078E-5 0.0 3.4515493675712414 7.511645640966132E-4 74-75 2.719733766556703E-4 2.5902226348159078E-5 0.0 3.822676466687665 7.511645640966132E-4 76-77 2.9787560300382934E-4 2.5902226348159078E-5 0.0 4.238148177312136 7.511645640966132E-4 78-79 3.108267161779089E-4 2.5902226348159078E-5 0.0 4.709154261227061 7.511645640966132E-4 80-81 4.1443562157054525E-4 2.5902226348159078E-5 0.0 5.19706154783416 7.770667904447722E-4 82-83 4.5328896109278385E-4 2.5902226348159078E-5 0.0 5.7046027220131625 9.065779221855677E-4 84-85 4.6624007426686337E-4 2.5902226348159078E-5 0.0 6.240584540722444 9.065779221855677E-4 86-87 5.05093413789102E-4 5.1804452696318156E-5 0.0 6.818696330587007 9.065779221855677E-4 88-89 5.439467533113406E-4 5.1804452696318156E-5 0.0 7.438070367024187 9.065779221855677E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3145 0.0 49.119797 1 GTATCAA 5720 0.0 42.463787 1 TCAACGC 6940 0.0 34.192326 4 ATCAACG 7190 0.0 33.135456 3 CAACGCA 7160 0.0 33.07472 5 TATCAAC 7485 0.0 32.083138 2 AACGCAG 7685 0.0 30.750153 6 GTACATG 11555 0.0 25.463293 1 ACGCAGA 9255 0.0 25.019674 7 TACATGG 11720 0.0 24.417871 2 ACATGGG 11835 0.0 23.819702 3 CGCAGAG 9685 0.0 23.319708 8 CATGGGG 9930 0.0 21.507074 4 TAAGGTG 1855 0.0 19.482718 5 GCAGAGT 11115 0.0 19.335619 9 ATGGGGG 6450 0.0 18.652657 5 AGAGTAC 9200 0.0 18.217987 10-11 TAAGGCG 1320 0.0 18.01258 5 GTACACT 3775 0.0 16.846354 4 GAGTACA 8755 0.0 16.722008 1 >>END_MODULE