##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921381_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3431039 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.85992435527547 31.0 31.0 34.0 25.0 34.0 2 29.923541527799596 31.0 31.0 34.0 25.0 34.0 3 29.96412865024268 31.0 31.0 34.0 25.0 34.0 4 33.40801284975193 37.0 35.0 37.0 28.0 37.0 5 33.392132820408044 37.0 35.0 37.0 27.0 37.0 6 33.428737767189475 37.0 35.0 37.0 28.0 37.0 7 33.33260537114268 37.0 35.0 37.0 27.0 37.0 8 33.29609981116507 37.0 35.0 37.0 27.0 37.0 9 34.791379520897316 39.0 35.0 39.0 27.0 39.0 10-11 34.673148133845174 39.0 35.0 39.0 27.0 39.0 12-13 34.55025052178072 39.0 35.0 39.0 27.0 39.0 14-15 35.62162379967118 40.0 36.0 41.0 26.5 41.0 16-17 35.5606782668457 40.0 36.0 41.0 26.0 41.0 18-19 35.50832182321449 40.0 36.0 41.0 25.5 41.0 20-21 35.4442509980213 40.0 36.0 41.0 25.0 41.0 22-23 35.31972355895692 40.0 36.0 41.0 25.0 41.0 24-25 35.21389890933912 40.0 35.5 41.0 24.0 41.0 26-27 35.061280853992045 39.0 35.0 41.0 23.5 41.0 28-29 34.9191511667457 39.0 35.0 41.0 23.0 41.0 30-31 34.77185409434286 39.0 35.0 41.0 22.0 41.0 32-33 34.59404702190794 39.0 34.5 41.0 20.5 41.0 34-35 34.4269789705101 39.0 34.0 41.0 19.0 41.0 36-37 34.25448909207969 39.0 34.0 40.5 18.0 41.0 38-39 34.48965998346274 39.0 34.5 41.0 19.0 41.0 40-41 34.62181761851148 39.0 35.0 41.0 19.0 41.0 42-43 34.46495041297986 39.0 35.0 41.0 16.0 41.0 44-45 34.351752195180524 39.0 34.5 41.0 15.0 41.0 46-47 34.20611496983858 39.0 34.0 41.0 14.0 41.0 48-49 34.06938874783994 39.0 34.0 41.0 10.5 41.0 50-51 32.392768779369746 37.0 32.0 39.5 8.5 40.0 52-53 32.54598461282428 37.5 32.0 39.5 8.0 40.0 54-55 33.39951760968033 38.0 33.0 40.0 7.0 41.0 56-57 33.4244902200179 38.0 33.0 41.0 4.0 41.0 58-59 33.257963841273735 38.0 33.0 40.0 2.0 41.0 60-61 33.018249719691326 37.5 33.0 40.0 2.0 41.0 62-63 32.74071061273276 37.0 33.0 40.0 2.0 41.0 64-65 32.46136010112389 37.0 32.0 40.0 2.0 41.0 66-67 32.12625679859658 36.0 32.0 39.0 2.0 41.0 68-69 31.762213137186723 36.0 32.0 39.0 2.0 41.0 70-71 31.379348792013147 35.0 31.5 39.0 2.0 40.5 72-73 31.025516177461114 35.0 31.0 37.5 2.0 40.0 74-75 30.6246912378437 35.0 31.0 37.0 2.0 39.0 76-77 30.244100547968124 35.0 31.0 36.5 2.0 39.0 78-79 29.895510951638848 35.0 30.5 36.0 2.0 38.5 80-81 29.538981049180727 35.0 30.0 36.0 2.0 37.0 82-83 29.23526138875134 35.0 30.0 35.0 2.0 37.0 84-85 28.996063437343615 34.5 30.0 35.0 2.0 36.5 86-87 28.76420393356065 34.0 30.0 35.0 2.0 36.0 88-89 28.556512764792238 34.0 29.0 35.0 2.0 36.0 90-91 28.300694046322413 34.0 29.0 35.0 2.0 35.5 92-93 28.107912501140326 34.0 29.0 35.0 2.0 35.0 94-95 27.89338827101645 34.0 29.0 35.0 2.0 35.0 96-97 27.632799568876948 34.0 29.0 35.0 2.0 35.0 98-99 27.392072634557636 34.0 29.0 35.0 2.0 35.0 100-101 26.34779275315728 33.0 25.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 153953.0 3 24625.0 4 16496.0 5 12280.0 6 10997.0 7 11248.0 8 11792.0 9 12642.0 10 13715.0 11 14503.0 12 14575.0 13 14239.0 14 15025.0 15 15821.0 16 16308.0 17 16825.0 18 15964.0 19 14968.0 20 15561.0 21 16346.0 22 18014.0 23 20596.0 24 23806.0 25 28384.0 26 33337.0 27 39789.0 28 46721.0 29 55075.0 30 64674.0 31 78760.0 32 97965.0 33 124790.0 34 171805.0 35 245719.0 36 397250.0 37 693979.0 38 726138.0 39 126342.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.257697926903596 18.52844857501961 13.458854474989575 24.75499902308722 2 15.775499556270786 19.631962852150824 39.560056263056325 25.03248132852206 3 18.894653717575753 23.727525527641237 29.629910440379515 27.74791031440349 4 13.369694010957781 15.997094178762833 36.773453555708564 33.85975825457082 5 14.393909349433228 37.05386824430722 34.44484751211341 14.107374894146135 6 33.34443995515374 35.31873672525482 17.2963625667782 14.04046075281324 7 28.795353201626238 31.770146022828804 21.157583564568455 18.276917210976503 8 26.439348334030555 34.858881987939775 20.053727314202753 18.64804236382691 9 26.675944796487993 15.67658001993418 19.600855787952558 38.046619395625264 10-11 25.505902560954063 25.319747560350603 28.066433910966282 21.107915967729053 12-13 25.921612130629928 22.769202287466893 27.809646952838126 23.499538629065057 14-15 23.310261310559323 24.431986180697184 24.914868639058778 27.34288386968472 16-17 23.573054601369016 27.431241716264605 25.77154995722925 23.224153725137132 18-19 23.58514699702363 26.961433752110125 26.892764056552576 22.560655194313664 20-21 24.065190971956493 26.11739406955389 26.816364389335362 23.00105056915426 22-23 23.989478848709606 25.888301707427136 26.482784664138926 23.63943477972433 24-25 23.77641086351787 26.06932286715693 26.482915677686865 23.671350591638333 26-27 23.64984027273027 26.280566044172016 26.460191801006967 23.60940188209075 28-29 23.752378081594365 26.473550601903167 26.30436645807376 23.469704858428713 30-31 24.090918895851164 26.101338793290406 26.235005328588517 23.57273698226991 32-33 23.816128098555648 26.148966193493926 26.15459191510932 23.88031379284111 34-35 24.111007147271096 26.247391187752868 26.19601653316544 23.445585131810603 36-37 24.144022071776412 26.094582668315947 26.220858248411243 23.540537011496397 38-39 23.925433511606144 26.237976349765457 26.225078447663886 23.61151169096452 40-41 24.098211959173465 26.03788911733519 26.246682363200858 23.617216560290487 42-43 23.896691410708343 26.04107115574666 26.13349980617443 23.928737627370566 44-45 23.879525602123753 26.059407791176152 26.232838706474343 23.82822790022575 46-47 24.051498014398202 26.0129022497451 26.020408312277905 23.91519142357879 48-49 23.765459907373806 26.12511326374078 26.141161850508652 23.96826497837676 50-51 23.86789799567822 26.14584303796877 26.223251347599668 23.763007618753342 52-53 24.075900587847528 26.000387867799002 26.16079223166222 23.76291931269125 54-55 23.65952250602632 25.857809653999336 26.464932124218937 24.01773571575541 56-57 23.690945265697287 26.04033352129725 26.270855852125706 23.997865360879757 58-59 23.79827646738905 25.96655164376432 26.3487589034678 23.88641298537883 60-61 23.887630508210698 25.947924801332206 26.418832937076083 23.745611753381016 62-63 23.847973025766866 25.96987028282081 26.410434624624312 23.771722066788012 64-65 23.637093080588212 25.779240012057734 26.429767771725544 24.15389913562851 66-67 23.639549536222432 25.91146599624083 26.292070708390902 24.156913759145837 68-69 23.680461761169788 25.840885682830674 26.40183391358684 24.076818642412697 70-71 23.622987426314772 25.6828157299112 26.389744236659425 24.304452607114605 72-73 23.625626374563446 25.868324013095933 26.25201174323629 24.254037869104327 74-75 23.569230400820494 25.902015491741903 26.3400058873759 24.1887482200617 76-77 23.631585272066573 25.64003274794986 26.338284803494048 24.39009717648952 78-79 23.508944579884293 25.65954628917215 26.443661210709546 24.387847920234012 80-81 23.659411880442168 25.716964158036443 26.350308850480843 24.273315111040546 82-83 23.582875804640203 25.787908739549042 26.432468063793685 24.19674739201707 84-85 23.588304902596843 25.76307586518348 26.40074091189651 24.247878320323167 86-87 23.47613454042452 25.84194405704121 26.363736895102534 24.318184507431738 88-89 23.381302110388567 25.629298038846766 26.491798192230764 24.497601658533906 90-91 23.423433030433262 25.50660993729989 26.58276072725233 24.487196305014518 92-93 23.493457653666507 25.44242225389671 26.68823563870652 24.375884453730258 94-95 23.44245740123111 25.356969413975822 26.685951070075465 24.514622114717607 96-97 23.33440085183301 25.207735106582856 26.777498658053272 24.68036538353086 98-99 23.20980346383056 25.150418085289456 26.737167094164803 24.90261135671518 100-101 23.376288294542963 25.07923386734469 26.8662455762643 24.678232261848045 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 35.5 2 42.5 3 64.5 4 71.5 5 87.5 6 147.0 7 264.0 8 413.5 9 479.0 10 434.0 11 443.0 12 506.5 13 570.5 14 659.0 15 746.0 16 854.5 17 980.0 18 1100.0 19 1205.5 20 1300.0 21 1427.0 22 1576.0 23 1772.0 24 2091.5 25 2626.5 26 3489.5 27 4902.0 28 7168.0 29 10578.0 30 15583.0 31 22085.0 32 30289.0 33 37884.0 34 44582.0 35 52431.5 36 62285.0 37 72689.0 38 82112.0 39 91300.5 40 99199.5 41 106780.0 42 114820.0 43 122536.5 44 129872.0 45 137350.5 46 142721.5 47 146859.0 48 151472.5 49 153380.5 50 151706.5 51 148822.0 52 146105.0 53 142210.0 54 137409.5 55 130232.0 56 119835.0 57 107767.0 58 95831.0 59 82912.0 60 68260.5 61 55801.0 62 45467.0 63 34979.5 64 25582.5 65 18949.5 66 14305.0 67 10828.5 68 8153.5 69 6158.0 70 4698.0 71 3433.0 72 2401.0 73 1751.0 74 1314.5 75 1006.0 76 751.0 77 485.0 78 319.5 79 238.5 80 189.0 81 138.5 82 105.5 83 90.0 84 71.5 85 63.5 86 56.5 87 50.0 88 45.0 89 41.5 90 34.0 91 31.0 92 27.5 93 21.0 94 13.5 95 16.5 96 18.0 97 11.5 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05447329511556121 2 0.06254665132048921 3 0.0528994278409543 4 0.06004012195722637 5 0.051966765752298354 6 0.01903213574663535 7 0.015971838268233035 8 0.02197585046395567 9 0.021859267702873678 10-11 0.024278359995325034 12-13 0.030428100642400157 14-15 0.04759491221172362 16-17 0.032788901554310516 18-19 0.02478840957505875 20-21 0.028956243283739996 22-23 0.051194404960130155 24-25 0.046021044937116715 26-27 0.03293463000566301 28-29 0.021946704773685172 30-31 0.014193951161732641 32-33 0.010725614019543351 34-35 0.010463302807108867 36-37 0.0014864302037954102 38-39 0.007242704032218813 40-41 0.0038763768059762657 42-43 0.22902683414557515 44-45 0.20136757407887232 46-47 0.20810022853135743 48-49 0.20581229184512329 50-51 0.20367008361024166 52-53 0.20961580442542335 54-55 0.20694897376567273 56-57 0.2188695610863065 58-59 0.2148911743643835 60-61 0.21997709731658546 62-63 0.2178786076171096 64-65 0.21891327962171225 66-67 0.20826052982784513 68-69 0.20706555652675473 70-71 0.18962186089986152 72-73 0.19731632313127306 74-75 0.19711230329937957 76-77 0.19534898903801443 78-79 0.22223588831254906 80-81 0.23148964497343225 82-83 0.22872080439773493 84-85 0.2241303581801314 86-87 0.2425067158956806 88-89 0.24065596456350394 90-91 0.24010219644836445 92-93 0.24410972886055796 94-95 0.25522880969875306 96-97 0.2556659950528105 98-99 0.24517354655543117 100-101 0.25454388597739636 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3431039.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.37384667059126 #Duplication Level Percentage of deduplicated Percentage of total 1 79.62711974710466 49.66649757926716 2 11.47376418957174 14.31325616589737 3 3.709813513358326 6.94186017776099 4 1.6656472712224208 4.155713100100641 5 0.9140636405077526 2.8506832680096506 6 0.5817785457063188 2.17726594836753 7 0.39734413175651695 1.734871736474814 8 0.27730063149086526 1.3837045656215488 9 0.2071972050908198 1.163131803081886 >10 1.0846992923533727 11.761620188871696 >50 0.04748752553371753 1.9895039585821919 >100 0.012611863133104253 1.2904553264605567 >500 0.0010317499913310834 0.47508037040703666 >1k 1.4069317910596184E-4 0.09635581109706319 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 2.9145690270498237E-5 6 0.0 0.0 0.0 0.0 5.8291380540996475E-5 7 0.0 0.0 0.0 2.9145690270498237E-5 5.8291380540996475E-5 8 0.0 0.0 0.0 2.9145690270498237E-5 5.8291380540996475E-5 9 0.0 0.0 0.0 2.9145690270498237E-5 5.8291380540996475E-5 10-11 0.0 0.0 0.0 5.8291380540996475E-5 5.8291380540996475E-5 12-13 0.0 1.4572845135249119E-5 0.0 5.8291380540996475E-5 1.0200991594674383E-4 14-15 0.0 2.9145690270498237E-5 0.0 5.8291380540996475E-5 1.8944698675823853E-4 16-17 0.0 2.9145690270498237E-5 0.0 1.0200991594674383E-4 2.623112124344841E-4 18-19 0.0 2.9145690270498237E-5 0.0 1.457284513524912E-4 2.623112124344841E-4 20-21 0.0 2.9145690270498237E-5 0.0 1.603012964877403E-4 3.4974828324597885E-4 22-23 0.0 2.9145690270498237E-5 0.0 2.7688405756973324E-4 3.64321128381228E-4 24-25 0.0 2.9145690270498237E-5 0.0 4.8090388946322093E-4 4.226125089222244E-4 26-27 0.0 4.3718535405747356E-5 0.0 6.849237213567086E-4 4.663310443279718E-4 28-29 0.0 5.8291380540996475E-5 0.0 0.0019964797835291294 4.663310443279718E-4 30-31 0.0 5.8291380540996475E-5 0.0 0.00973466055034641 4.8090388946322093E-4 32-33 0.0 5.8291380540996475E-5 0.0 0.028154736801301296 5.246224248689682E-4 34-35 1.4572845135249119E-5 5.8291380540996475E-5 0.0 0.0512672691858064 5.537681151394665E-4 36-37 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.08937525921448283 5.537681151394665E-4 38-39 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.15202392045091878 5.974866505452139E-4 40-41 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.22367859998093872 6.12059495680463E-4 42-43 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.29922422916207014 6.12059495680463E-4 44-45 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.39638138767877606 6.412051859509612E-4 46-47 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.5062897856888249 6.994965664919577E-4 48-49 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.620948931212965 7.28642256762456E-4 50-51 2.9145690270498237E-5 5.8291380540996475E-5 0.0 0.7403151057157905 7.28642256762456E-4 52-53 2.9145690270498237E-5 7.28642256762456E-5 0.0 0.8669968484765112 8.306521727091998E-4 54-55 2.9145690270498237E-5 8.743707081149471E-5 0.0 1.0153338391082118 8.452250178444489E-4 56-57 2.9145690270498237E-5 8.743707081149471E-5 0.0 1.1856612530490036 8.452250178444489E-4 58-59 2.9145690270498237E-5 1.1658276108199295E-4 0.0 1.3636831292212068 8.452250178444489E-4 60-61 2.9145690270498237E-5 1.1658276108199295E-4 0.0 1.553523582798097 8.597978629796979E-4 62-63 2.9145690270498237E-5 1.1658276108199295E-4 0.0 1.7504318662655831 9.035163983854453E-4 64-65 2.9145690270498237E-5 1.1658276108199295E-4 0.0 1.9684124837986392 9.035163983854453E-4 66-67 2.9145690270498237E-5 1.457284513524912E-4 0.0 2.22349556504604 9.035163983854453E-4 68-69 2.9145690270498237E-5 1.7487414162298942E-4 0.0 2.503294191642823 9.326620886559436E-4 70-71 2.9145690270498237E-5 2.1859267702873677E-4 0.0 2.790466677878042 9.472349337911927E-4 72-73 5.8291380540996475E-5 2.623112124344841E-4 0.0 3.0930572342663547 0.001122109075414182 74-75 5.8291380540996475E-5 2.623112124344841E-4 0.0 3.422520117084067 0.0011658276108199295 76-77 5.8291380540996475E-5 2.7688405756973324E-4 0.0 3.7942296779488665 0.0011658276108199295 78-79 5.8291380540996475E-5 2.914569027049824E-4 0.0 4.208856267736974 0.0011949733010904278 80-81 5.8291380540996475E-5 2.914569027049824E-4 0.0 4.636408971160048 0.001224118991360926 82-83 5.8291380540996475E-5 2.914569027049824E-4 0.0 5.073317441159952 0.0012969832170371715 84-85 5.8291380540996475E-5 2.914569027049824E-4 0.0 5.542781647192003 0.0013115560621724206 86-87 5.8291380540996475E-5 2.914569027049824E-4 0.0 6.056168408461693 0.001355274597578168 88-89 5.8291380540996475E-5 2.914569027049824E-4 0.0 6.611772702088201 0.0013989931329839154 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2620 0.0 47.275635 1 GTATCAA 4770 0.0 41.089397 1 TCAACGC 5430 0.0 35.134247 4 CAACGCA 5490 0.0 34.400482 5 ATCAACG 5680 0.0 33.420258 3 TATCAAC 5870 0.0 32.824547 2 AACGCAG 6070 0.0 31.571907 6 ACGCAGA 6855 0.0 27.200415 7 GTACATG 8345 0.0 26.55759 1 CGCAGAG 7020 0.0 26.157867 8 TACATGG 8675 0.0 25.165127 2 ACATGGG 9200 0.0 23.006214 3 CATGGGG 7925 0.0 21.617844 4 GCAGAGT 8290 0.0 20.49041 9 GTATATA 1200 0.0 18.982704 1 GAGTACA 6490 0.0 18.938831 1 AGAGTAC 6580 0.0 18.496515 10-11 GTGTAGC 1885 0.0 18.37848 1 TAGCCCT 2195 0.0 17.512774 4 CAGAGTA 7495 0.0 17.09309 10-11 >>END_MODULE