##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921380_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2605413 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.478645420131087 33.0 31.0 34.0 30.0 34.0 2 31.609899083177982 34.0 31.0 34.0 29.0 34.0 3 31.67677677205111 34.0 31.0 34.0 28.0 34.0 4 35.19116124775611 37.0 35.0 37.0 33.0 37.0 5 34.94414167734636 37.0 35.0 37.0 32.0 37.0 6 34.902508738537804 37.0 35.0 37.0 32.0 37.0 7 34.770318179881656 37.0 35.0 37.0 32.0 37.0 8 34.73256063434089 37.0 35.0 37.0 32.0 37.0 9 36.35025195621577 39.0 37.0 39.0 32.0 39.0 10-11 36.2106639139361 39.0 37.0 39.0 32.0 39.0 12-13 36.14461929836076 39.0 37.0 39.0 32.0 39.0 14-15 37.37363308619401 40.0 38.0 41.0 32.0 41.0 16-17 37.34988848217154 40.0 38.0 41.0 32.0 41.0 18-19 37.32201746901547 40.0 38.0 41.0 31.5 41.0 20-21 37.28360167850548 40.0 38.0 41.0 31.0 41.0 22-23 37.17756685792233 40.0 37.5 41.0 31.0 41.0 24-25 37.1036430692562 40.0 37.0 41.0 31.0 41.0 26-27 36.96488119158076 40.0 37.0 41.0 30.5 41.0 28-29 36.809928790560264 40.0 37.0 41.0 30.0 41.0 30-31 36.66214204811291 40.0 37.0 41.0 30.0 41.0 32-33 36.60233828571516 40.0 36.5 41.0 30.0 41.0 34-35 36.720609362124165 40.0 37.0 41.0 30.0 41.0 36-37 36.6891707763798 40.0 37.0 41.0 30.0 41.0 38-39 36.59399277580944 40.0 37.0 41.0 30.0 41.0 40-41 36.46406212757824 40.0 36.5 41.0 30.0 41.0 42-43 36.35357676498889 40.0 36.0 41.0 29.5 41.0 44-45 36.20541004439603 40.0 36.0 41.0 29.0 41.0 46-47 36.03666750722438 40.0 36.0 41.0 28.0 41.0 48-49 35.870073381840044 40.0 35.0 41.0 28.0 41.0 50-51 35.71798252330821 39.5 35.0 41.0 27.5 41.0 52-53 35.547061060952714 39.0 35.0 41.0 27.0 41.0 54-55 35.34239753927688 39.0 35.0 41.0 26.5 41.0 56-57 35.0805317621429 39.0 35.0 41.0 26.0 41.0 58-59 34.85470019532412 38.5 35.0 40.5 26.0 41.0 60-61 34.58298972178308 38.0 34.0 40.0 26.0 41.0 62-63 34.28977977771662 37.5 34.0 40.0 25.0 41.0 64-65 33.98312705125828 37.0 34.0 40.0 25.0 41.0 66-67 33.65197302692509 36.5 34.0 39.5 23.5 41.0 68-69 33.28474621873768 36.0 34.0 39.0 23.0 41.0 70-71 32.90711894812838 35.5 33.0 39.0 22.5 40.0 72-73 32.50722476628465 35.0 33.0 37.5 21.5 40.0 74-75 32.09984578260721 35.0 33.0 37.0 20.5 39.0 76-77 29.320785226756755 33.0 29.0 34.5 13.0 36.5 78-79 30.9871580820392 34.5 31.5 36.0 17.5 38.0 80-81 31.186074722126587 35.0 32.0 36.0 18.0 37.0 82-83 31.019517251199716 35.0 32.0 35.0 18.0 37.0 84-85 30.7884039881585 35.0 32.0 35.0 16.0 36.5 86-87 30.541784738158594 35.0 32.0 35.0 11.0 36.0 88-89 30.25943737134957 35.0 32.0 35.0 7.0 36.0 90-91 30.072078016038148 34.5 31.0 35.0 2.0 35.0 92-93 29.921886856325656 34.0 31.0 35.0 2.0 35.0 94-95 29.82278126346955 34.0 31.0 35.0 2.0 35.0 96-97 29.62771583622251 34.0 31.0 35.0 2.0 35.0 98-99 29.361466493028168 34.0 31.0 35.0 2.0 35.0 100-101 28.26865184137793 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 40735.0 3 14364.0 4 8002.0 5 5965.0 6 5350.0 7 5441.0 8 5765.0 9 6246.0 10 6947.0 11 7917.0 12 8324.0 13 9276.0 14 9910.0 15 11310.0 16 12441.0 17 13461.0 18 12225.0 19 10507.0 20 9982.0 21 9796.0 22 10673.0 23 11744.0 24 13776.0 25 16426.0 26 20041.0 27 23974.0 28 28857.0 29 34609.0 30 42454.0 31 52278.0 32 66430.0 33 87576.0 34 127500.0 35 186677.0 36 315301.0 37 605044.0 38 657474.0 39 90614.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.5140815806398 20.064642687315217 14.178221764857613 25.24305396718738 2 15.16670153008841 21.23378131231037 37.902207142459616 25.6973100151416 3 17.75328607465888 24.95869855936276 29.81948660313308 27.468528762845285 4 13.385785366067108 17.19574820721291 35.385546622060176 34.032919804659805 5 14.096149637768793 37.72065005816431 34.1344267456012 14.04877355846569 6 33.12357530543494 35.52901819041577 17.101785035060104 14.24562146908919 7 28.26155125740335 32.65798191378014 20.973520856034504 18.10694597278201 8 26.604917232421677 35.060958758992975 19.880761566120412 18.45336244246494 9 26.861844935908437 15.747867996359885 19.702788003283935 37.68749906444775 10-11 25.46951114437596 25.76439943358395 27.79071422712085 20.975375194919238 12-13 25.965621871289567 23.217471054900646 27.665548543000874 23.151358530808917 14-15 23.28209927164813 24.999620959936713 25.03867648038175 26.67960328803341 16-17 23.26465958729736 27.938912517065447 25.991830079783956 22.804597815853235 18-19 23.2765405321588 27.353178860957012 27.400676247641204 21.969604359242982 20-21 23.806986037060764 26.250759481184634 27.47295325817908 22.469301223575524 22-23 23.785765525309483 25.963275603389413 27.02153636648708 23.229422504814025 24-25 23.52218797875997 26.241194366928074 26.979958842595288 23.256658811716676 26-27 23.180100378607595 26.56563299321086 27.114314621991177 23.139952006190374 28-29 23.30839564237505 26.95819346225751 26.774159559639056 22.95925133572839 30-31 23.909677456504276 26.38482378581937 26.6335188421486 23.07197991552775 32-33 23.54348885511175 26.43957245794455 26.507787861228294 23.509150825715402 34-35 23.804773038638576 26.623734065335913 26.608686606341198 22.962806289684316 36-37 23.784461378940687 26.432194537611043 26.824975142957978 22.958368940490292 38-39 23.731158421253024 26.522487073041916 26.66071878185681 23.08563572384824 40-41 23.891090938785915 26.331889403592594 26.57305401023961 23.203965647381878 42-43 23.642670606481616 26.396261167815045 26.297516292904362 23.663551932798978 44-45 23.486366434975135 26.330710106142053 26.598061253161 23.584862205721812 46-47 23.654571933504172 26.292859237604198 26.36151155631371 23.69105727257792 48-49 23.368838171104194 26.546807769862934 26.483048001010328 23.60130605802254 50-51 23.59650467929333 26.443520201193394 26.52781139040351 23.432163729109767 52-53 23.818850717653763 26.214714636912678 26.4159532349594 23.550481410474156 54-55 23.088848080255303 26.13793620944002 26.79066111329782 23.982554597006853 56-57 23.32479801385892 26.237221490580758 26.46380217199635 23.97417832356397 58-59 23.422264949284433 26.262102633363355 26.541643307635038 23.77398910971717 60-61 23.584042008049238 26.230656586884383 26.694917693933128 23.490383711133248 62-63 23.475181102984884 26.186605797713998 26.694179771092656 23.644033328208454 64-65 23.129780737581 25.99402386805284 26.70031320460237 24.175882189763787 66-67 23.189289453748778 26.258292982693927 26.467875694817465 24.084541868739826 68-69 23.14919520711964 26.1640467939488 26.546829940894256 24.139928058037306 70-71 23.123810525794394 25.983809039821576 26.510004686381983 24.382375748002048 72-73 23.089581900454572 26.29328605561262 26.33739776612002 24.27973427781279 74-75 23.01067091166414 26.346388952820217 26.38936744073374 24.253572694781905 76-77 22.967736052643577 25.851228839390885 26.53445496095919 24.646580147006343 78-79 22.812979199213405 25.94735614061535 26.66510474328605 24.574559916885192 80-81 23.1533386417709 26.109544415858416 26.309215656268236 24.427901286102447 82-83 23.028077028278574 26.132030653914995 26.484656247150788 24.355236070655643 84-85 22.977389020760405 26.145325717313327 26.356893915470625 24.520391346455643 86-87 22.735602006255384 26.363302005199056 26.278046714675185 24.623049273870375 88-89 22.624668502126994 26.021257809188448 26.43145606237769 24.92261762630687 90-91 22.70520733748415 25.792293277592087 26.546324770265656 24.956174614658106 92-93 22.827699398365098 25.677160876181947 26.552405829180543 24.94273389627241 94-95 22.6257641018791 25.718501902589928 26.57071863528636 25.08501536024461 96-97 22.404104353073244 25.525956125523557 26.69161481557684 25.378324705826355 98-99 22.144197775372497 25.538788967444287 26.61625175598185 25.70076150120136 100-101 22.129915380881986 25.624702418706214 26.614711363656863 25.630670836754938 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 137.0 1 101.5 2 81.5 3 102.5 4 100.0 5 116.0 6 163.0 7 362.5 8 560.0 9 578.0 10 491.5 11 392.5 12 390.0 13 434.5 14 465.0 15 529.0 16 607.5 17 677.0 18 751.5 19 873.0 20 1048.5 21 1194.5 22 1360.5 23 1638.0 24 2088.0 25 2714.0 26 3755.5 27 5472.0 28 8023.5 29 11728.5 30 16392.0 31 22056.5 32 29612.0 33 35013.0 34 38656.0 35 44087.5 36 51271.0 37 58397.0 38 64557.0 39 70288.0 40 75468.0 41 80289.5 42 84891.5 43 89786.0 44 94621.5 45 100638.0 46 105527.0 47 109208.0 48 112641.5 49 113975.0 50 114020.5 51 112975.0 52 110123.0 53 107438.5 54 104911.0 55 98555.0 56 89606.0 57 80319.5 58 71006.0 59 60577.5 60 49045.0 61 40079.0 62 32931.5 63 24798.0 64 17424.5 65 12438.0 66 9142.5 67 6976.5 68 5219.0 69 3898.0 70 2915.5 71 2083.0 72 1458.5 73 1060.5 74 771.0 75 526.0 76 355.0 77 213.5 78 108.0 79 61.5 80 41.5 81 30.0 82 18.5 83 11.5 84 6.5 85 5.0 86 4.0 87 3.5 88 3.5 89 3.0 90 1.5 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 1.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1549082621450035 2 3.0705304686819325E-4 3 0.006793548661958776 4 0.004298742656154706 5 0.027749919110712964 6 0.0011514489257557247 7 1.5352652343409662E-4 8 0.0017271733886335872 9 0.0 10-11 0.10487780632091727 12-13 2.49480600580407E-4 14-15 0.005661290551632313 16-17 7.676326171704831E-5 18-19 2.49480600580407E-4 20-21 6.141060937363865E-4 22-23 2.3028978515114495E-4 24-25 0.0018998907274969457 26-27 0.00295538557610636 28-29 0.007158174155114756 30-31 0.015947567621716785 32-33 0.016484910453736124 34-35 0.012358885136444779 36-37 5.565336474486003E-4 38-39 1.9190815429262077E-4 40-41 0.005315855873905596 42-43 0.008232859819153431 44-45 0.008635866943167935 46-47 0.009864079130640708 48-49 0.012358885136444779 50-51 0.006083488491076079 52-53 0.0018423182812091596 54-55 0.0010554948486094144 56-57 0.006141060937363865 58-59 0.009461072006626204 60-61 0.007599562909987783 62-63 0.018135320580652665 64-65 0.03398693412522314 66-67 0.036539312577315 68-69 0.025888410014074544 70-71 0.04062695626374782 72-73 0.02542783044377225 74-75 0.023854183578572764 76-77 0.24078716119095128 78-79 0.06853040189789487 80-81 0.053062604661909644 82-83 0.020169547016154442 84-85 0.03130021996512645 86-87 0.07889344222969641 88-89 0.2606688459756668 90-91 0.31373145063757646 92-93 0.05150814861213941 94-95 0.005699672182490837 96-97 0.010612520932381929 98-99 0.0012665938183312971 100-101 0.0012474030029020352 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2605413.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.695926619871365 #Duplication Level Percentage of deduplicated Percentage of total 1 77.46249937074761 45.46733178857234 2 12.564519519549714 14.74972231466863 3 3.987524762771118 7.021543826116005 4 1.833646777863861 4.305103868810431 5 1.0381103767145907 3.046642524748332 6 0.6748713238785097 2.3767318622537066 7 0.45354453218192065 1.8634851605855731 8 0.34013956492583086 1.597184555472123 9 0.25245201742993506 1.3336114581095362 >10 1.322943106648337 13.495537329645297 >50 0.05139803656148173 2.0210819617240925 >100 0.016514822544228522 1.751974369773648 >500 0.001180149546201886 0.4860442976695466 >1k 6.556386367769166E-4 0.4840046818507625 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.8381630858524156E-5 0.0 5 0.0 0.0 0.0 3.8381630858524156E-5 0.0 6 0.0 0.0 0.0 3.8381630858524156E-5 0.0 7 0.0 0.0 0.0 3.8381630858524156E-5 3.8381630858524156E-5 8 0.0 0.0 0.0 3.8381630858524156E-5 3.8381630858524156E-5 9 0.0 0.0 0.0 3.8381630858524156E-5 3.8381630858524156E-5 10-11 0.0 0.0 0.0 7.676326171704831E-5 7.676326171704831E-5 12-13 0.0 0.0 0.0 7.676326171704831E-5 1.1514489257557247E-4 14-15 0.0 3.8381630858524156E-5 0.0 7.676326171704831E-5 1.727173388633587E-4 16-17 0.0 7.676326171704831E-5 0.0 7.676326171704831E-5 1.9190815429262077E-4 18-19 0.0 7.676326171704831E-5 0.0 7.676326171704831E-5 1.9190815429262077E-4 20-21 0.0 7.676326171704831E-5 0.0 9.59540771463104E-5 1.9190815429262077E-4 22-23 0.0 7.676326171704831E-5 0.0 1.919081542926208E-4 1.9190815429262077E-4 24-25 0.0 9.59540771463104E-5 0.0 5.373428320193382E-4 2.878622314389312E-4 26-27 0.0 1.5352652343409662E-4 0.0 0.0014009295263361318 3.0705304686819325E-4 28-29 0.0 1.9190815429262077E-4 0.0 0.004548223256735113 3.0705304686819325E-4 30-31 0.0 1.9190815429262077E-4 0.0 0.015621323759419332 3.0705304686819325E-4 32-33 0.0 1.9190815429262077E-4 0.0 0.04488731728904401 3.454346777267174E-4 34-35 0.0 2.3028978515114495E-4 0.0 0.08664653166311828 3.454346777267174E-4 36-37 0.0 2.3028978515114495E-4 0.0 0.1474622257584498 3.454346777267174E-4 38-39 0.0 2.3028978515114495E-4 0.0 0.23499153493131414 3.6462549315597947E-4 40-41 0.0 2.3028978515114495E-4 0.0 0.33144457327878535 3.8381630858524155E-4 42-43 0.0 2.686714160096691E-4 0.0 0.4397959171923991 4.413887548730278E-4 44-45 0.0 2.686714160096691E-4 0.0 0.5813281809832069 4.98961201160814E-4 46-47 0.0 2.686714160096691E-4 0.0 0.7453712712725391 5.373428320193382E-4 48-49 0.0 2.878622314389312E-4 0.0 0.9053650995062971 5.373428320193382E-4 50-51 0.0 3.0705304686819325E-4 0.0 1.0659538430183622 5.373428320193382E-4 52-53 0.0 3.0705304686819325E-4 0.0 1.2384217012811405 5.757244628778623E-4 54-55 0.0 3.0705304686819325E-4 0.0 1.4606513439519953 6.141060937363865E-4 56-57 0.0 3.0705304686819325E-4 0.0 1.7134327647862353 6.141060937363865E-4 58-59 0.0 3.0705304686819325E-4 0.0 1.9665788111136315 6.141060937363865E-4 60-61 0.0 3.262438622974553E-4 0.0 2.2218550379536754 6.141060937363865E-4 62-63 0.0 3.454346777267174E-4 0.0 2.4967442781624256 6.141060937363865E-4 64-65 0.0 3.454346777267174E-4 0.0 2.8085566472570758 6.141060937363865E-4 66-67 0.0 3.454346777267174E-4 0.0 3.186116750012378 6.332969091656486E-4 68-69 0.0 3.454346777267174E-4 0.0 3.5851705660484536 6.524877245949106E-4 70-71 0.0 3.454346777267174E-4 0.0 3.99980732421309 7.676326171704831E-4 72-73 0.0 3.454346777267174E-4 0.0 4.423060758505466 8.827775097460556E-4 74-75 0.0 3.454346777267174E-4 0.0 4.894060941585845 8.827775097460556E-4 76-77 0.0 3.454346777267174E-4 0.0 5.43798622329742 8.827775097460556E-4 78-79 0.0 3.454346777267174E-4 0.0 6.037545678938425 8.827775097460556E-4 80-81 0.0 3.454346777267174E-4 0.0 6.634360847973047 8.827775097460556E-4 82-83 0.0 3.454346777267174E-4 0.0 7.247641736645975 9.211591406045798E-4 84-85 0.0 3.454346777267174E-4 0.0 7.910262211787536 9.211591406045798E-4 86-87 0.0 3.454346777267174E-4 0.0 8.64456038255739 9.211591406045798E-4 88-89 0.0 3.454346777267174E-4 0.0 9.442265007505528 9.211591406045798E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2800 0.0 57.206783 1 GTATCAA 4870 0.0 40.11331 1 TCAACGC 6345 0.0 29.843475 4 TATCAAC 6570 0.0 29.038143 2 CAACGCA 6550 0.0 29.035412 5 ATCAACG 6585 0.0 28.683718 3 AACGCAG 6900 0.0 27.491049 6 GTACATG 8885 0.0 27.336262 1 TACATGG 8890 0.0 26.211258 2 ACATGGG 9210 0.0 24.424566 3 ACCGTAT 195 1.5577825E-8 24.379488 8 TACCGTA 180 1.9371873E-7 23.77 7 ACGCAGA 8265 0.0 22.892826 7 CATGGGG 7505 0.0 22.19548 4 CGCAGAG 8480 0.0 21.919977 8 TACACCG 340 4.1836756E-11 19.577553 5 GTACCGT 275 2.8134309E-8 19.016367 6 ATGGGGG 5090 0.0 18.68192 5 GCAGAGT 9350 0.0 18.660086 9 AGAGTAC 8000 0.0 18.600025 10-11 >>END_MODULE