##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921379_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3681701 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50816130913401 33.0 31.0 34.0 30.0 34.0 2 31.64427529557669 34.0 31.0 34.0 30.0 34.0 3 31.717963245793182 34.0 31.0 34.0 29.0 34.0 4 35.21841100078469 37.0 35.0 37.0 33.0 37.0 5 34.972054493289924 37.0 35.0 37.0 32.0 37.0 6 34.92578321813749 37.0 35.0 37.0 32.0 37.0 7 34.79755526046249 37.0 35.0 37.0 32.0 37.0 8 34.75887069590931 37.0 35.0 37.0 32.0 37.0 9 36.384510040331904 39.0 37.0 39.0 32.0 39.0 10-11 36.24265332790468 39.0 37.0 39.0 32.0 39.0 12-13 36.18028636763279 39.0 37.0 39.0 32.0 39.0 14-15 37.428157935693314 40.0 38.0 41.0 32.0 41.0 16-17 37.40300393758211 40.0 38.0 41.0 32.0 41.0 18-19 37.3693810279542 40.0 38.0 41.0 32.0 41.0 20-21 37.33028659850433 40.0 38.0 41.0 31.0 41.0 22-23 37.22374834349666 40.0 38.0 41.0 31.0 41.0 24-25 37.153395129044966 40.0 37.5 41.0 31.0 41.0 26-27 37.02219599038597 40.0 37.0 41.0 31.0 41.0 28-29 36.87142274725731 40.0 37.0 41.0 30.0 41.0 30-31 36.739394915556694 40.0 37.0 41.0 30.0 41.0 32-33 36.699113127328914 40.0 37.0 41.0 30.0 41.0 34-35 36.83111855090894 40.0 37.0 41.0 30.0 41.0 36-37 36.81149392631286 40.0 37.0 41.0 30.0 41.0 38-39 36.72724591160444 40.0 37.0 41.0 30.0 41.0 40-41 36.6106200639324 40.0 37.0 41.0 30.0 41.0 42-43 36.51661107189313 40.0 37.0 41.0 30.0 41.0 44-45 36.39018336904599 40.0 36.0 41.0 30.0 41.0 46-47 36.246261171127145 40.0 36.0 41.0 29.0 41.0 48-49 36.099100931879036 40.0 36.0 41.0 28.5 41.0 50-51 35.954093637696275 40.0 35.5 41.0 28.0 41.0 52-53 35.78768332898299 39.0 35.0 41.0 28.0 41.0 54-55 35.58645568991072 39.0 35.0 41.0 28.0 41.0 56-57 35.32963323203052 39.0 35.0 41.0 27.0 41.0 58-59 35.109004370534166 39.0 35.0 41.0 26.5 41.0 60-61 34.843219479257 38.0 35.0 40.0 26.0 41.0 62-63 34.549206195723116 37.5 34.0 40.0 26.0 41.0 64-65 34.2396737268996 37.0 34.0 40.0 26.0 41.0 66-67 33.90611798731076 36.5 34.0 39.5 26.0 41.0 68-69 33.53809176790837 36.0 34.0 39.0 25.0 41.0 70-71 33.15383147626599 35.5 33.5 39.0 24.5 40.0 72-73 32.75384611623812 35.0 33.0 37.5 23.0 40.0 74-75 32.33918751142475 35.0 33.0 37.0 22.5 39.0 76-77 29.550756022827493 33.0 29.0 34.5 17.5 36.5 78-79 31.216376071821152 34.5 31.5 36.0 20.0 37.5 80-81 31.410903954449317 35.0 32.0 36.0 20.0 37.0 82-83 31.243814883392215 35.0 32.0 35.0 20.0 37.0 84-85 31.011653173356553 35.0 32.0 35.0 19.5 36.5 86-87 30.766570669372662 35.0 32.0 35.0 18.0 36.0 88-89 30.486717416759266 35.0 32.0 35.0 13.5 36.0 90-91 30.30433527872035 35.0 32.0 35.0 9.0 35.0 92-93 30.15934917039705 34.0 32.0 35.0 7.0 35.0 94-95 30.060915321477765 34.0 32.0 35.0 2.0 35.0 96-97 29.873471528513587 34.0 31.0 35.0 2.0 35.0 98-99 29.60767468623878 34.0 31.0 35.0 2.0 35.0 100-101 28.513405352580236 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57076.0 3 20116.0 4 11208.0 5 8333.0 6 7297.0 7 7375.0 8 7521.0 9 8225.0 10 9397.0 11 10422.0 12 10968.0 13 11735.0 14 12826.0 15 13968.0 16 15224.0 17 16025.0 18 14932.0 19 13869.0 20 13323.0 21 13301.0 22 14163.0 23 15804.0 24 18447.0 25 22582.0 26 27167.0 27 32817.0 28 39901.0 29 47837.0 30 58170.0 31 72647.0 32 91864.0 33 121513.0 34 175464.0 35 259731.0 36 444673.0 37 867117.0 38 961234.0 39 127427.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.39549036953856 19.846089981512733 14.05323222464149 25.70518742430722 2 15.234017657118148 21.048850418612332 37.710908691882636 26.006223232386883 3 17.822573131534224 24.7165340706449 29.245578480193984 28.215314317626888 4 13.375301198110467 17.2309086370485 35.30461515227159 34.08917501256944 5 14.437578941734513 37.270034865451635 34.0408305872681 14.251555605545763 6 33.334211562034774 35.31541402734044 17.101367239117863 14.249007171506928 7 28.650961038326095 31.893054693558266 21.12374870813579 18.332235559979846 8 26.479525276391996 34.802317556021954 19.997571732357102 18.720585435228948 9 26.549575861809526 15.773823023651296 19.70771119110433 37.968889923434844 10-11 25.540682791860895 25.580366556171153 27.762225869001707 21.11672478296624 12-13 25.983260683302774 23.046757176694463 27.491521220612864 23.478460919389903 14-15 23.363120096938722 24.787281057373068 24.74513792064704 27.104460925041174 16-17 23.486737230141426 27.68175925395273 25.77922626441013 23.05227725149571 18-19 23.534342362153055 27.098708963161506 26.951317492066146 22.415631182619293 20-21 24.071618469414474 26.173039126745536 26.861855850433336 22.893486553406657 22-23 23.99172446274399 25.960722705265198 26.41097733665843 23.63657549533238 24-25 23.73298312708467 26.234096761225977 26.424745493856 23.60817461783336 26-27 23.48494561036771 26.45453696017801 26.535208757969396 23.525308671484883 28-29 23.5642342011979 26.673878498961006 26.38895000611172 23.372937293729372 30-31 24.0691362384589 26.215456499519508 26.240584601906342 23.47482266011525 32-33 23.743572664209463 26.271110239403317 26.08323427014152 23.902082826245696 34-35 24.050543853174922 26.39001640326859 26.22144724991603 23.337992493640456 36-37 23.944166181946237 26.32983270796136 26.332983447346187 23.393017662746214 38-39 23.887176966044173 26.42573597215413 26.242152052247675 23.444935009554023 40-41 24.026994831889386 26.185845273941915 26.248930638558342 23.538229255610354 42-43 23.870136011911754 26.16891836555359 26.03627880710234 23.924666815432314 44-45 23.81223435623584 26.165083975143066 26.18322931003994 23.839452358581152 46-47 23.91256043292767 26.140870994748127 26.02541075919349 23.921157813130712 48-49 23.620583245003214 26.357304796773718 26.146371927483642 23.875740030739426 50-51 23.745650878950947 26.200390005027852 26.244855684829872 23.809103431191332 52-53 23.97606336204022 26.09152207177433 26.189644197627874 23.74277036855757 54-55 23.475091697667143 25.9644144604179 26.458633922052638 24.101859919862324 56-57 23.593397284873184 26.09096246610234 26.173035314141536 24.142604934882943 58-59 23.590849781325 26.116223102961623 26.314599987260202 23.978327128453174 60-61 23.73096522537499 26.046566270623835 26.415445670420652 23.807022833580522 62-63 23.633505503739023 26.009652698976893 26.49943236196915 23.857409435314935 64-65 23.379299870042395 25.796054864226498 26.45698289140592 24.36766237432518 66-67 23.433319023139042 26.10679390059668 26.16307915530002 24.296807920964252 68-69 23.50214958643826 26.010593614054688 26.233390423798898 24.253866375708153 70-71 23.379076865219844 25.859134775808418 26.265218104884685 24.496570254087054 72-73 23.372176408045046 26.01152944216132 26.157776790358376 24.458517359435255 74-75 23.328830251473008 26.04283700949179 26.13368651622434 24.49464622281086 76-77 23.23508538149493 25.70481885966411 26.34647851620493 24.713617242636033 78-79 23.19638312390861 25.70695198386882 26.36765947199121 24.729005420231353 80-81 23.289400272686088 25.929202168987654 26.151680209930785 24.629717348395474 82-83 23.209152162774664 25.913252119144815 26.23352130935195 24.644074408728578 84-85 23.15207574606549 25.866551573858825 26.21783460326672 24.763538076808963 86-87 23.024005286635084 26.02876741727842 26.13695750182027 24.810269794266222 88-89 22.95057547186896 25.747646391064883 26.239779786542943 25.06199835052321 90-91 22.930308328522802 25.5927510841234 26.357989814710237 25.11895077264356 92-93 22.941934112813623 25.51083841212992 26.438385443396506 25.10884203165995 94-95 22.72183402258575 25.47933261352293 26.440578292962837 25.358255070928486 96-97 22.636619657095203 25.376136558877636 26.505412088117307 25.481831695909847 98-99 22.439332179320832 25.27155645285928 26.421218547025283 25.86789282079461 100-101 22.4251382666595 25.304238258130717 26.438728354158215 25.831895121051573 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 29.0 2 35.0 3 54.0 4 53.0 5 58.0 6 90.5 7 199.5 8 302.5 9 323.0 10 299.5 11 268.0 12 275.5 13 308.5 14 344.0 15 388.0 16 419.0 17 453.0 18 525.0 19 599.0 20 691.5 21 802.0 22 951.5 23 1155.5 24 1421.0 25 1872.0 26 2708.0 27 4051.5 28 6059.5 29 9556.0 30 15076.0 31 22021.0 32 31663.0 33 40768.0 34 48656.5 35 57928.0 36 69297.0 37 80550.0 38 90961.0 39 101398.5 40 109821.0 41 117492.5 42 124920.0 43 133312.5 44 141275.0 45 149546.5 46 154860.5 47 158335.5 48 163469.0 49 165537.5 50 164356.5 51 161320.5 52 157745.5 53 153805.0 54 148295.0 55 139517.0 56 127715.5 57 113983.5 58 101315.0 59 88086.5 60 72033.0 61 58142.0 62 47345.0 63 36089.0 64 25708.5 65 18826.5 66 14178.5 67 10884.5 68 8495.5 69 6496.0 70 4779.5 71 3382.5 72 2376.0 73 1739.5 74 1288.0 75 943.0 76 669.5 77 412.0 78 219.0 79 126.5 80 73.5 81 45.0 82 33.5 83 20.5 84 11.0 85 8.5 86 7.0 87 5.0 88 3.5 89 4.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1536518038808692 2 3.530976578489128E-4 3 0.0059211761085433065 4 0.004182849177594813 5 0.02661813113014881 6 0.0013037451982113703 7 1.629681497764213E-4 8 0.0017383269309484935 9 0.0 10-11 0.10523668271812404 12-13 2.58032903812667E-4 14-15 0.005432271659214043 16-17 1.0864543318428085E-4 18-19 2.4445222466463193E-4 20-21 6.790339574017554E-4 22-23 1.765488289244564E-4 24-25 0.001656842856060283 26-27 0.0031778789206402145 28-29 0.006817500932313624 30-31 0.015305425399835565 32-33 0.014911585704542547 34-35 0.011475673880089665 36-37 6.926146365497905E-4 38-39 1.629681497764213E-4 40-41 0.004929786530736744 42-43 0.008026181376488747 44-45 0.008528666504966047 46-47 0.009424991328736363 48-49 0.011815190858790542 50-51 0.005703885242174744 52-53 0.0017519076100965289 54-55 0.0010049702569545978 56-57 0.005853272712803131 58-59 0.008813860767074784 60-61 0.00763234168119573 62-63 0.0178721737588142 64-65 0.03449492503600917 66-67 0.03642338147503016 68-69 0.02697122878799772 70-71 0.041964298567428476 72-73 0.025816871060414737 74-75 0.024132866846058382 76-77 0.24547077560073458 78-79 0.07101337126507558 80-81 0.054648652891693274 82-83 0.019963598347611605 84-85 0.03240350044721176 86-87 0.08122604198439798 88-89 0.261495976995416 90-91 0.32051760857277656 92-93 0.05273377713182032 94-95 0.004780399060108357 96-97 0.009737346949141171 98-99 0.0014667133479877915 100-101 0.0012765838399153 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3681701.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.361035622505916 #Duplication Level Percentage of deduplicated Percentage of total 1 74.5623977880635 40.53289162256376 2 13.594440257856055 14.78015702250683 3 4.8089847162125245 7.842641683983466 4 2.1961189410083795 4.775331999336659 5 1.2431564316063977 3.378963553145136 6 0.7957907869121204 2.5956006789235073 7 0.5034907619926324 1.9159195473798896 8 0.3746558093598742 1.6293342239032722 9 0.3014384102431555 1.4747853741497754 >10 1.5072002910592255 14.479766450240572 >50 0.08051131100011767 2.980641033252846 >100 0.02986196782350163 2.72164438144511 >500 0.0015019437501085145 0.5761844111322676 >1k 4.505831123365165E-4 0.31613801803686575 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7161358296070215E-5 2 0.0 0.0 0.0 0.0 2.7161358296070215E-5 3 0.0 0.0 0.0 0.0 2.7161358296070215E-5 4 0.0 0.0 0.0 0.0 2.7161358296070215E-5 5 0.0 0.0 0.0 0.0 2.7161358296070215E-5 6 0.0 0.0 0.0 0.0 2.7161358296070215E-5 7 0.0 0.0 0.0 0.0 2.7161358296070215E-5 8 0.0 0.0 0.0 2.7161358296070215E-5 2.7161358296070215E-5 9 0.0 0.0 0.0 5.432271659214043E-5 2.7161358296070215E-5 10-11 0.0 0.0 0.0 1.0864543318428086E-4 4.074203744410532E-5 12-13 0.0 0.0 0.0 1.4938747062838618E-4 8.148407488821064E-5 14-15 0.0 0.0 0.0 1.629681497764213E-4 1.629681497764213E-4 16-17 0.0 0.0 0.0 1.901295080724915E-4 1.629681497764213E-4 18-19 0.0 0.0 0.0 2.1729086636856172E-4 1.629681497764213E-4 20-21 0.0 0.0 0.0 2.1729086636856172E-4 1.901295080724915E-4 22-23 0.0 0.0 0.0 3.395169787008777E-4 2.037101872205266E-4 24-25 0.0 0.0 0.0 4.210010535890883E-4 2.1729086636856172E-4 26-27 0.0 0.0 0.0 6.926146365497905E-4 2.1729086636856172E-4 28-29 0.0 0.0 0.0 0.003028491450011829 2.1729086636856172E-4 30-31 0.0 0.0 0.0 0.010837381960132016 2.1729086636856172E-4 32-33 0.0 0.0 0.0 0.03286524353824496 2.1729086636856172E-4 34-35 0.0 0.0 0.0 0.06530948602290082 2.1729086636856172E-4 36-37 0.0 0.0 0.0 0.11381967193968223 2.1729086636856172E-4 38-39 0.0 0.0 0.0 0.18696520983099932 2.1729086636856172E-4 40-41 0.0 1.3580679148035107E-5 0.0 0.26911473799746366 2.1729086636856172E-4 42-43 0.0 2.7161358296070215E-5 0.0 0.3614633562041024 2.3087154551659683E-4 44-45 0.0 2.7161358296070215E-5 0.0 0.4825079494505393 2.4445222466463193E-4 46-47 0.0 2.7161358296070215E-5 0.0 0.6276446675055904 2.4445222466463193E-4 48-49 0.0 2.7161358296070215E-5 0.0 0.7652984313500744 2.4445222466463193E-4 50-51 0.0 2.7161358296070215E-5 0.0 0.9004126081938756 2.58032903812667E-4 52-53 0.0 2.7161358296070215E-5 0.0 1.0511853080953615 2.851942621087373E-4 54-55 0.0 2.7161358296070215E-5 0.0 1.2383406474344332 2.9877494125677236E-4 56-57 0.0 2.7161358296070215E-5 0.0 1.4557673205944752 2.9877494125677236E-4 58-59 0.0 2.7161358296070215E-5 0.0 1.6782052643601422 2.9877494125677236E-4 60-61 0.0 5.432271659214043E-5 0.0 1.9073656443040865 2.9877494125677236E-4 62-63 0.0 5.432271659214043E-5 0.0 2.1502017681501027 2.9877494125677236E-4 64-65 0.0 5.432271659214043E-5 0.0 2.432856443258157 2.9877494125677236E-4 66-67 0.0 5.432271659214043E-5 0.0 2.7725635514671074 3.259362995528426E-4 68-69 0.0 5.432271659214043E-5 0.0 3.134950393853276 3.259362995528426E-4 70-71 0.0 5.432271659214043E-5 0.0 3.503204089631396 3.395169787008777E-4 72-73 0.0 5.432271659214043E-5 0.0 3.881928489032651 3.9383969529301814E-4 74-75 2.7161358296070215E-5 5.432271659214043E-5 0.0 4.303432027750216 4.074203744410532E-4 76-77 2.7161358296070215E-5 5.432271659214043E-5 0.0 4.801829371803957 4.210010535890883E-4 78-79 2.7161358296070215E-5 5.432271659214043E-5 0.0 5.342612015478715 4.3458173273712344E-4 80-81 2.7161358296070215E-5 5.432271659214043E-5 0.0 5.883937886319394 4.7532377018122873E-4 82-83 2.7161358296070215E-5 5.432271659214043E-5 0.0 6.441574152816864 5.703885242174745E-4 84-85 2.7161358296070215E-5 5.432271659214043E-5 0.0 7.040332715774584 5.703885242174745E-4 86-87 2.7161358296070215E-5 8.148407488821064E-5 0.0 7.715808535239554 5.839692033655096E-4 88-89 2.7161358296070215E-5 8.148407488821064E-5 0.0 8.452750508528531 5.975498825135447E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3265 0.0 48.764538 1 GTATCAA 5615 0.0 41.475235 1 TCAACGC 7050 0.0 32.312805 4 CAACGCA 7170 0.0 31.696032 5 ATCAACG 7385 0.0 30.847027 3 TATCAAC 7535 0.0 30.485306 2 AACGCAG 7690 0.0 29.550322 6 GTACATG 11170 0.0 24.593319 1 TACATGG 11760 0.0 23.205395 2 ACGCAGA 9530 0.0 23.095695 7 CGCAGAG 9605 0.0 22.519407 8 ACATGGG 12185 0.0 21.65568 3 CATGGGG 10315 0.0 19.968391 4 GCAGAGT 11120 0.0 18.724588 9 ATGGGGG 6180 0.0 17.38666 5 AGAGTAC 9440 0.0 17.34843 10-11 GAGTACA 8825 0.0 16.695118 1 ACCGCTC 770 0.0 16.669247 8 CAGAGTA 10295 0.0 16.16161 10-11 AGTACAT 9065 0.0 15.235392 2 >>END_MODULE