##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921378_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2528763 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.453929450881716 33.0 31.0 34.0 29.0 34.0 2 31.58705857369789 34.0 31.0 34.0 29.0 34.0 3 31.653952149726962 34.0 31.0 34.0 28.0 34.0 4 35.160180293685094 37.0 35.0 37.0 33.0 37.0 5 34.90177015402392 37.0 35.0 37.0 32.0 37.0 6 34.85989948445149 37.0 35.0 37.0 32.0 37.0 7 34.730414435832856 37.0 35.0 37.0 32.0 37.0 8 34.68890995320637 37.0 35.0 37.0 32.0 37.0 9 36.30846742063214 39.0 37.0 39.0 32.0 39.0 10-11 36.16577057636481 39.0 37.0 39.0 32.0 39.0 12-13 36.104455221782345 39.0 37.0 39.0 32.0 39.0 14-15 37.33796267186763 40.0 38.0 41.0 31.5 41.0 16-17 37.311425586343994 40.0 38.0 41.0 31.5 41.0 18-19 37.282024254546585 40.0 38.0 41.0 31.0 41.0 20-21 37.245675454757915 40.0 38.0 41.0 31.0 41.0 22-23 37.13371992551299 40.0 37.5 41.0 31.0 41.0 24-25 37.063107732911305 40.0 37.0 41.0 31.0 41.0 26-27 36.92182561196917 40.0 37.0 41.0 30.0 41.0 28-29 36.765605950419236 40.0 37.0 41.0 30.0 41.0 30-31 36.62568477156617 40.0 37.0 41.0 30.0 41.0 32-33 36.573743763254996 40.0 36.5 41.0 30.0 41.0 34-35 36.69921538712802 40.0 37.0 41.0 30.0 41.0 36-37 36.667819008740636 40.0 37.0 41.0 30.0 41.0 38-39 36.574500852788496 40.0 37.0 41.0 30.0 41.0 40-41 36.4485254252771 40.0 37.0 41.0 30.0 41.0 42-43 36.33812302695033 40.0 36.0 41.0 29.5 41.0 44-45 36.19692830051689 40.0 36.0 41.0 29.0 41.0 46-47 36.032542393257096 40.0 36.0 41.0 28.0 41.0 48-49 35.86420455376799 40.0 35.5 41.0 28.0 41.0 50-51 35.711775085288735 39.5 35.0 41.0 27.5 41.0 52-53 35.53926425687184 39.0 35.0 41.0 27.0 41.0 54-55 35.32876687139127 39.0 35.0 41.0 26.5 41.0 56-57 35.05815195018276 39.0 35.0 41.0 26.0 41.0 58-59 34.82868540863655 38.5 35.0 40.5 26.0 41.0 60-61 34.555531301272595 38.0 34.0 40.0 26.0 41.0 62-63 34.26420704510466 37.5 34.0 40.0 25.0 41.0 64-65 33.94727659333832 37.0 34.0 40.0 24.5 41.0 66-67 33.60565620423899 36.5 34.0 39.0 23.5 41.0 68-69 33.23885551947731 36.0 33.5 39.0 23.0 41.0 70-71 32.85858283279216 35.0 33.0 38.5 22.0 40.0 72-73 32.46341393005196 35.0 33.0 37.5 21.5 40.0 74-75 32.058772411649485 35.0 33.0 37.0 20.0 39.0 76-77 29.2913499604352 33.0 28.5 34.5 13.0 36.5 78-79 30.95387468101993 34.5 31.5 36.0 17.5 37.5 80-81 31.155211065647514 35.0 32.0 36.0 18.0 37.0 82-83 30.995533586975135 35.0 32.0 35.0 18.0 37.0 84-85 30.768189031554165 35.0 32.0 35.0 16.0 36.5 86-87 30.523975754153316 35.0 32.0 35.0 11.0 36.0 88-89 30.2400128046796 35.0 31.5 35.0 7.0 36.0 90-91 30.057966286283055 34.0 31.0 35.0 2.0 35.0 92-93 29.919888498843108 34.0 31.0 35.0 2.0 35.0 94-95 29.817183935386588 34.0 31.0 35.0 2.0 35.0 96-97 29.624977508766143 34.0 31.0 35.0 2.0 35.0 98-99 29.352773866115566 34.0 31.0 35.0 2.0 35.0 100-101 28.256083112573222 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 41231.0 3 14566.0 4 8093.0 5 5883.0 6 5189.0 7 5553.0 8 5799.0 9 6167.0 10 6973.0 11 7578.0 12 7922.0 13 8649.0 14 9641.0 15 10963.0 16 11598.0 17 12327.0 18 11601.0 19 9882.0 20 9703.0 21 9440.0 22 9912.0 23 11259.0 24 13290.0 25 16202.0 26 19285.0 27 23182.0 28 27982.0 29 33642.0 30 41203.0 31 50762.0 32 64423.0 33 85480.0 34 120485.0 35 179341.0 36 311263.0 37 597253.0 38 632605.0 39 82428.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.101711616162014 20.13630196175656 14.397211544478337 25.364774877603086 2 15.379860816168673 21.262034640149132 37.15816006536056 26.19994447832163 3 17.81746565320214 24.6059510721263 29.480625795888667 28.095957478782896 4 13.613063402951454 17.49497360649073 34.89788234996354 33.99408064059428 5 14.61996446388084 36.93561095702281 33.93588625910356 14.508538319992786 6 33.35536012217947 35.26393985302556 16.894388863382105 14.486311161412862 7 28.553497719437416 31.913600410002996 21.045396917543048 18.487504953016533 8 26.498969241762932 34.456509832440986 19.96867190963337 19.075849016162717 9 26.3786286022059 15.842330815501493 19.85002153226696 37.929019050025644 10-11 25.451207303396806 25.5979909483419 27.70559111887694 21.24521062938436 12-13 25.85208792138753 23.187599134595267 27.483421710016653 23.47689123400055 14-15 23.41695885572096 24.926916484682913 24.800622000827328 26.8555026587688 16-17 23.419196199245402 27.813067348001653 25.741637900932513 23.026098551820436 18-19 23.373301586510685 27.126667370569805 27.142307465683736 22.35772357723577 20-21 23.886469487364792 26.189566178513275 27.095271473328197 22.828692860793733 22-23 23.903073385615905 25.91210271759838 26.6936126957161 23.491211201069614 24-25 23.723426299925418 26.256543819368044 26.583013079334144 23.437016801372394 26-27 23.353080170444997 26.479084896240124 26.74592424886551 23.421910684449365 28-29 23.534920564927 26.557038362919506 26.671589071233615 23.236452000919886 30-31 23.942304687917144 26.18592117945649 26.45888565313914 23.412888479487222 32-33 23.655555039190464 26.274389598781028 26.325015350875024 23.74504001115349 34-35 23.986875100480468 26.35650360998016 26.348297087198556 23.308324202340817 36-37 23.956269972867943 26.210393859716074 26.455713372216948 23.377622795199038 38-39 23.73527415319646 26.299179498880775 26.488402712871668 23.4771436350511 40-41 23.92151899985664 26.142339501015865 26.47103430206979 23.465107197057705 42-43 23.857246983513285 26.145125945167152 26.168499292669512 23.82912777865005 44-45 23.746007815989856 26.16578891844268 26.27375659695369 23.814446668613776 46-47 23.882034059986722 26.15523097698466 26.14482959229538 23.817905370733232 48-49 23.646043298059425 26.301483853450957 26.212773396196603 23.839699452293015 50-51 23.689302803095945 26.29151659991687 26.24550294095896 23.773677656028227 52-53 23.99797841827048 26.16888512061274 26.130683869620636 23.702452591496147 54-55 23.574883143383662 26.061793620538293 26.336297919121776 24.027025316956273 56-57 23.59424409674271 26.198922409361053 26.127855528188675 24.07897796570756 58-59 23.595393414423235 26.127457252006664 26.322611671970513 23.954537661599588 60-61 23.621298630009132 26.092372052518492 26.48886301554602 23.797466301926356 62-63 23.59660820325625 26.117871205938116 26.417541752256923 23.867978838548712 64-65 23.44378552629653 25.941153875518662 26.34825373504528 24.26680686313952 66-67 23.42979450293573 26.08397664076031 26.2385167942996 24.247712062004364 68-69 23.36782530117265 26.040133674752326 26.32829742296169 24.263743601113337 70-71 23.377265095493623 25.86756460793731 26.28031006746032 24.474860229108742 72-73 23.27773737619861 26.032859174598705 26.222745497937872 24.466657951264818 74-75 23.232514215080347 26.05157972805933 26.20695179233622 24.508954264524103 76-77 23.223841347843297 25.862256570420932 26.27143687593562 24.642465205800153 78-79 23.118092344391385 25.86791753215378 26.29193861330267 24.72205151015217 80-81 23.239962546438598 25.913781236936906 26.181744732177954 24.664511484446543 82-83 23.161815092705996 25.872758242955708 26.338972907774178 24.626453756564114 84-85 23.097382135163123 25.862896953960107 26.238677530857164 24.801043380019607 86-87 23.023059629234073 26.028713076423944 26.138402102198192 24.80982519214379 88-89 22.816163937429152 25.80419034206364 26.234758436609013 25.144887283898193 90-91 22.757549448807872 25.635943237039093 26.374191787527867 25.232315526625165 92-93 22.79594652739655 25.52831149819236 26.461460852534902 25.21428112187619 94-95 22.64318644020877 25.455296842883712 26.490334278830325 25.411182438077194 96-97 22.61502706420286 25.352750190872186 26.523828422465357 25.508394322459598 98-99 22.39087953421687 25.332671868354495 26.434390695252024 25.842057902176606 100-101 22.29171910569355 25.30975523093505 26.464504620005968 25.934021043365433 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 83.0 1 63.5 2 45.5 3 56.5 4 65.5 5 75.0 6 115.5 7 255.0 8 363.0 9 398.5 10 369.0 11 303.0 12 325.0 13 353.5 14 381.5 15 396.0 16 450.0 17 529.0 18 606.0 19 682.5 20 774.5 21 903.5 22 1043.5 23 1299.0 24 1612.5 25 2069.5 26 2846.0 27 4057.0 28 5918.5 29 8880.0 30 12940.5 31 17891.5 32 24515.5 33 30272.5 34 34876.0 35 40513.5 36 47764.5 37 55185.5 38 62073.0 39 68481.0 40 73064.0 41 77683.5 42 83255.5 43 88898.5 44 93946.0 45 99215.0 46 102761.0 47 105346.0 48 108719.0 49 110087.5 50 109083.5 51 107489.5 52 106088.0 53 104748.5 54 102351.5 55 96580.5 56 88836.5 57 80196.5 58 71807.5 59 62798.0 60 51695.0 61 42261.0 62 34620.0 63 26490.5 64 18967.5 65 13534.0 66 10073.0 67 7687.5 68 5726.0 69 4349.0 70 3250.0 71 2292.5 72 1612.0 73 1124.0 74 811.0 75 570.0 76 387.5 77 234.5 78 116.5 79 73.5 80 47.5 81 29.5 82 16.0 83 11.0 84 8.0 85 7.5 86 6.5 87 3.5 88 3.5 89 3.0 90 1.5 91 1.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.149519745424937 2 8.304455577687589E-4 3 0.005654938798139644 4 0.004389497948206297 5 0.02495291175962318 6 9.490806374500102E-4 7 3.954502656041709E-5 8 0.0016608911155375178 9 0.0 10-11 0.10265888895084276 12-13 1.5818010624166836E-4 14-15 0.0058922089575021465 16-17 7.909005312083418E-5 18-19 2.3727015936250256E-4 20-21 6.129479116864649E-4 22-23 1.779526195218769E-4 24-25 0.0016213460889771007 26-27 0.003479962337316704 28-29 0.0074542375066386215 30-31 0.01629255094289184 32-33 0.01603550827024913 34-35 0.011329650109559495 36-37 7.909005312083418E-4 38-39 1.384075929614598E-4 40-41 0.004962900833332345 42-43 0.009569896427620935 44-45 0.009036038569055304 46-47 0.010024664233065732 48-49 0.01235782080013034 50-51 0.0065644744090292365 52-53 0.0019772513280208546 54-55 9.09535610889593E-4 56-57 0.0062876592231063165 58-59 0.009985119206505315 60-61 0.00814627547144592 62-63 0.019238655421642912 64-65 0.03487871342628787 66-67 0.037211869993352485 68-69 0.02714766073372633 70-71 0.04172000302124003 72-73 0.026554485335320076 74-75 0.025229726945546104 76-77 0.23871355283195778 78-79 0.06983651690569657 80-81 0.05403827879480995 82-83 0.02089954653718043 84-85 0.032624646912344096 86-87 0.08203615759958525 88-89 0.26218352609556533 90-91 0.3163404399700565 92-93 0.05142830704182243 94-95 0.004369725434926089 96-97 0.009431488834659477 98-99 0.0012852133632135555 100-101 0.0012852133632135555 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2528763.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.72678776355668 #Duplication Level Percentage of deduplicated Percentage of total 1 78.59351061762013 47.72731438869055 2 12.010429062049104 14.587095532006177 3 3.8036434860198463 6.929491521112861 4 1.7577594823488196 4.2697234809590405 5 0.9845738730939047 2.989500431445827 6 0.6058523987183042 2.2074882019804902 7 0.42738597868544825 1.816764433452582 8 0.31741235775911675 1.5420346306534403 9 0.23151627104348324 1.2653315509920902 >10 1.2059679657522484 12.729447896439241 >50 0.04786661110764219 1.9399906672366223 >100 0.012840968806992786 1.404697089877468 >500 9.143672594412757E-4 0.3633421849587879 >1k 3.2655973550621054E-4 0.22777799019489883 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.954502656041709E-5 2 0.0 0.0 0.0 0.0 3.954502656041709E-5 3 0.0 0.0 0.0 0.0 3.954502656041709E-5 4 0.0 0.0 0.0 0.0 3.954502656041709E-5 5 0.0 0.0 0.0 0.0 7.909005312083418E-5 6 0.0 0.0 0.0 0.0 1.5818010624166836E-4 7 0.0 0.0 0.0 0.0 1.9772513280208546E-4 8 0.0 0.0 0.0 0.0 1.9772513280208546E-4 9 0.0 0.0 0.0 0.0 1.9772513280208546E-4 10-11 0.0 0.0 0.0 0.0 2.3727015936250253E-4 12-13 0.0 0.0 0.0 0.0 2.3727015936250253E-4 14-15 0.0 0.0 0.0 0.0 2.768151859229196E-4 16-17 0.0 0.0 0.0 0.0 2.768151859229196E-4 18-19 0.0 0.0 0.0 0.0 2.768151859229196E-4 20-21 0.0 1.9772513280208544E-5 0.0 0.0 2.768151859229196E-4 22-23 0.0 3.954502656041709E-5 0.0 1.9772513280208544E-5 2.768151859229196E-4 24-25 0.0 3.954502656041709E-5 0.0 2.3727015936250253E-4 3.163602124833367E-4 26-27 0.0 3.954502656041709E-5 0.0 0.0012456683366531384 3.163602124833367E-4 28-29 0.0 3.954502656041709E-5 0.0 0.0038951851162010833 3.163602124833367E-4 30-31 0.0 3.954502656041709E-5 0.0 0.012674181012613677 3.163602124833367E-4 32-33 0.0 3.954502656041709E-5 0.0 0.03549166133797434 3.163602124833367E-4 34-35 0.0 3.954502656041709E-5 0.0 0.07141831796811327 3.559052390437538E-4 36-37 0.0 3.954502656041709E-5 0.0 0.12670226509957636 3.559052390437538E-4 38-39 0.0 3.954502656041709E-5 0.0 0.2024705359893355 3.756777523239624E-4 40-41 0.0 3.954502656041709E-5 0.0 0.28177808675625193 4.3499529216458797E-4 42-43 0.0 3.954502656041709E-5 0.0 0.3718023397210415 4.3499529216458797E-4 44-45 0.0 3.954502656041709E-5 0.0 0.49729848151052514 4.3499529216458797E-4 46-47 0.0 3.954502656041709E-5 0.0 0.6431603119786236 4.3499529216458797E-4 48-49 0.0 3.954502656041709E-5 0.0 0.786649440853097 4.7454031872500507E-4 50-51 0.0 3.954502656041709E-5 0.0 0.9261445220449682 5.140853452854222E-4 52-53 0.0 3.954502656041709E-5 0.0 1.0767715282135968 5.734028851260477E-4 54-55 0.0 3.954502656041709E-5 0.0 1.2650453996677427 6.52492938246882E-4 56-57 0.0 3.954502656041709E-5 0.0 1.4920733971510973 6.722654515270905E-4 58-59 0.0 3.954502656041709E-5 0.0 1.724815650972432 6.920379648072991E-4 60-61 0.0 3.954502656041709E-5 0.0 1.9535243120846042 7.118104780875076E-4 62-63 0.0 3.954502656041709E-5 0.0 2.1906560638541452 7.118104780875076E-4 64-65 0.0 3.954502656041709E-5 0.0 2.4727505108228804 7.118104780875076E-4 66-67 0.0 3.954502656041709E-5 0.0 2.8189079008194913 7.315829913677162E-4 68-69 0.0 3.954502656041709E-5 0.0 3.1867755103977715 7.711280179281332E-4 70-71 0.0 3.954502656041709E-5 0.0 3.555038570241656 9.490806374500101E-4 72-73 0.0 3.954502656041709E-5 0.0 3.9316060856632276 0.0011863507968125128 74-75 0.0 3.954502656041709E-5 0.0 4.349458608813874 0.0011863507968125128 76-77 0.0 3.954502656041709E-5 0.0 4.851502493511649 0.0012061233100927214 78-79 0.0 3.954502656041709E-5 0.0 5.403511519268513 0.0012258958233729298 80-81 0.0 3.954502656041709E-5 0.0 5.961966384354723 0.0012654408499333468 82-83 0.0 3.954502656041709E-5 0.0 6.517534462502022 0.001304985876493764 84-85 0.0 3.954502656041709E-5 0.0 7.116087984520495 0.001304985876493764 86-87 0.0 3.954502656041709E-5 0.0 7.7909436352872925 0.001304985876493764 88-89 0.0 3.954502656041709E-5 0.0 8.53794918701357 0.001304985876493764 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2610 0.0 53.902046 1 GTATCAA 4340 0.0 37.781864 1 TCAACGC 5510 0.0 29.285004 4 CAACGCA 5595 0.0 28.807123 5 ATCAACG 5655 0.0 28.618029 3 TATCAAC 5840 0.0 27.6302 2 AACGCAG 5990 0.0 26.904823 6 GTACATG 7030 0.0 22.851538 1 ACGCAGA 7185 0.0 22.033056 7 TACATGG 7320 0.0 21.784426 2 GTGGTAT 1460 0.0 20.834406 1 ACATGGG 7525 0.0 20.56028 3 CGCAGAG 7660 0.0 20.418528 8 CATGGGG 6355 0.0 18.29652 4 TGGTATC 1650 0.0 17.833054 2 GCAGAGT 8485 0.0 17.76089 9 GTATAGG 700 0.0 17.65344 1 GAGTACT 3490 0.0 17.403042 12-13 AGAGTAC 7095 0.0 17.18669 10-11 CAGAGTA 7780 0.0 16.895569 10-11 >>END_MODULE