##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921377_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3208138 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51572625616479 33.0 31.0 34.0 30.0 34.0 2 31.65917769123398 34.0 31.0 34.0 30.0 34.0 3 31.732202604750793 34.0 31.0 34.0 29.0 34.0 4 35.230576116114705 37.0 35.0 37.0 33.0 37.0 5 34.99091529105045 37.0 35.0 37.0 32.0 37.0 6 34.946537524258616 37.0 35.0 37.0 32.0 37.0 7 34.8182659224759 37.0 35.0 37.0 32.0 37.0 8 34.77876169915384 37.0 35.0 37.0 32.0 37.0 9 36.409732062648175 39.0 37.0 39.0 32.0 39.0 10-11 36.26313737127268 39.0 37.0 39.0 32.0 39.0 12-13 36.20558046443139 39.0 37.0 39.0 32.0 39.0 14-15 37.461188701982266 40.0 38.0 41.0 32.0 41.0 16-17 37.43996720215901 40.0 38.0 41.0 32.0 41.0 18-19 37.400552438829 40.0 38.0 41.0 32.0 41.0 20-21 37.36380557818897 40.0 38.0 41.0 31.5 41.0 22-23 37.25655769795439 40.0 38.0 41.0 31.0 41.0 24-25 37.19200296246608 40.0 38.0 41.0 31.0 41.0 26-27 37.058881195260305 40.0 37.0 41.0 31.0 41.0 28-29 36.91084174059844 40.0 37.0 41.0 30.0 41.0 30-31 36.775055343629234 40.0 37.0 41.0 30.0 41.0 32-33 36.73194419940788 40.0 37.0 41.0 30.0 41.0 34-35 36.85980886732429 40.0 37.0 41.0 30.0 41.0 36-37 36.835751298728425 40.0 37.0 41.0 30.0 41.0 38-39 36.749924878543254 40.0 37.0 41.0 30.0 41.0 40-41 36.63045651402776 40.0 37.0 41.0 30.0 41.0 42-43 36.52974513565189 40.0 37.0 41.0 30.0 41.0 44-45 36.39746700422488 40.0 36.0 41.0 30.0 41.0 46-47 36.24341456009685 40.0 36.0 41.0 29.0 41.0 48-49 36.08527547755115 40.0 36.0 41.0 28.5 41.0 50-51 35.93044127154131 40.0 35.0 41.0 28.0 41.0 52-53 35.762533594253114 39.0 35.0 41.0 28.0 41.0 54-55 35.550287892852495 39.0 35.0 41.0 28.0 41.0 56-57 35.27960814029821 39.0 35.0 41.0 27.0 41.0 58-59 35.05020061481146 38.5 35.0 40.5 26.5 41.0 60-61 34.77531717775233 38.0 34.5 40.0 26.0 41.0 62-63 34.474427222270364 37.5 34.0 40.0 26.0 41.0 64-65 34.154354644345105 37.0 34.0 40.0 26.0 41.0 66-67 33.81423757332135 36.5 34.0 39.0 25.5 41.0 68-69 33.44558105044109 36.0 34.0 39.0 25.0 41.0 70-71 33.06677300041332 35.0 33.5 38.5 24.0 40.0 72-73 32.67122923016404 35.0 33.0 37.5 23.0 40.0 74-75 32.26309949883702 35.0 33.0 37.0 22.5 39.0 76-77 29.508819757753564 33.0 29.0 34.5 17.5 36.5 78-79 31.166319528648707 34.5 31.5 36.0 20.0 37.0 80-81 31.36596711238731 35.0 32.0 35.5 20.0 37.0 82-83 31.207860291546062 35.0 32.0 35.0 20.0 37.0 84-85 30.980085021280257 35.0 32.0 35.0 19.5 36.0 86-87 30.74347082326259 35.0 32.0 35.0 18.0 36.0 88-89 30.469001021776496 35.0 32.0 35.0 13.5 36.0 90-91 30.2862965994605 35.0 32.0 35.0 9.0 35.0 92-93 30.146876630618756 34.0 32.0 35.0 7.0 35.0 94-95 30.053407926965736 34.0 31.5 35.0 2.0 35.0 96-97 29.862956487532642 34.0 31.0 35.0 2.0 35.0 98-99 29.59840801736085 34.0 31.0 35.0 2.0 35.0 100-101 28.512329737685846 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 49813.0 3 17350.0 4 9667.0 5 6919.0 6 6155.0 7 6378.0 8 6607.0 9 7338.0 10 8145.0 11 8866.0 12 9665.0 13 10410.0 14 11218.0 15 12425.0 16 13534.0 17 14192.0 18 13385.0 19 11893.0 20 11248.0 21 11439.0 22 11960.0 23 13573.0 24 15984.0 25 19393.0 26 23656.0 27 28533.0 28 34711.0 29 41735.0 30 51039.0 31 63439.0 32 81176.0 33 106203.0 34 152662.0 35 228193.0 36 396960.0 37 773918.0 38 812568.0 39 105784.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.463051797199576 19.913231643600348 14.036136622696581 25.587579936503495 2 15.225029550090522 20.89618442248899 37.765826130758526 26.112959896661962 3 17.82929570176546 24.59331441156254 29.209135443406915 28.36825444326508 4 13.27780160697453 16.971579942244677 35.384206313185466 34.366412137595326 5 14.411090044408443 37.28609943712306 34.061023180751995 14.241787337716497 6 33.634436689743744 35.542643753760025 16.77128758856516 14.051631967931074 7 29.162675510849763 31.779678847679417 20.75875859338837 18.298887048082452 8 26.88107119556594 35.0822408051672 19.52910137188018 18.50758662738667 9 26.707392263051027 15.741186943953158 19.29200053114922 38.25942026184659 10-11 25.740439992879132 25.462283037028357 27.53084526294554 21.26643170714697 12-13 26.26126356396807 22.742658344482088 27.515014968212032 23.481063123337815 14-15 23.51636701375624 24.376399155663183 24.602025304854813 27.50520852572576 16-17 23.747816879391372 27.52207901345859 25.41033939635371 23.319764710796328 18-19 23.782217406672927 26.828154505153478 26.7144900169133 22.675138071260292 20-21 24.301997525652883 25.907751551610147 26.692323445607848 23.097927477129122 22-23 24.183092102761293 25.629135191983877 26.378948011523207 23.80882469373162 24-25 23.958538543830468 25.973243252678852 26.29912271733194 23.769095486158733 26-27 23.742905743764208 26.146388479242706 26.407341150535856 23.703364626457233 28-29 23.896099280886595 26.328572027537568 26.226309135687632 23.549019555888208 30-31 24.195722397438967 25.98714714626711 26.113798899462516 23.703331556831408 32-33 23.940373375649138 26.008256881448983 26.015209060278977 24.036160682622903 34-35 24.26180426561065 26.06914989710143 26.12928512186268 23.539760715425246 36-37 24.251905401205754 25.992724080823738 26.135549295739523 23.619821222230986 38-39 24.16550698296095 26.05743438429328 26.114211999792403 23.662846632953364 40-41 24.233064003291812 25.934690582176835 26.08723300789287 23.745012406638484 42-43 24.105406884039336 25.88304334204632 25.970983725885365 24.040566048028982 44-45 24.019839428502756 25.94042217313784 26.10066946614942 23.939068932209988 46-47 24.255201285112317 25.968253136950313 25.830199578342004 23.946345999595366 48-49 23.97922458010065 26.07598575068436 25.92742288712932 24.017366782085666 50-51 23.998902095059492 26.026488125668656 26.02873256507004 23.945877214201815 52-53 24.25566495115539 25.907571238448902 25.928393652093938 23.908370158301775 54-55 23.772150509848636 25.83775987661267 26.206949327469857 24.183140286068834 56-57 23.89576022676298 25.959738535523364 25.968186348147764 24.17631488956589 58-59 23.954258181658915 25.901742626363834 26.09930605747405 24.04469313450321 60-61 23.999261194309014 25.953885432123396 26.148920782572915 23.897932590994674 62-63 23.967004759234726 25.87758863570008 26.157318965996986 23.99808763906822 64-65 23.742034942031697 25.750591391571298 26.154825245408208 24.352548420988793 66-67 23.77384195123229 25.968805216498957 26.00022108037207 24.257131751896686 68-69 23.76598528568785 25.8386881991017 26.051391433659397 24.34393508155105 70-71 23.74431566057146 25.72948048185798 26.04884501457355 24.47735884299701 72-73 23.80065123038331 25.93187413703088 25.84232879012295 24.425145842462857 74-75 23.676974712887368 25.988030673153816 25.922603133725037 24.412391480233776 76-77 23.708972339920255 25.665098053920282 26.05739185321284 24.568537752946618 78-79 23.614608835179514 25.724155603443638 26.05445755570005 24.6067780056768 80-81 23.76298408258915 25.8685838999559 25.84591068061449 24.52252133684046 82-83 23.703143209354614 25.9349222412818 25.906317284003734 24.455617265359848 84-85 23.650350095163024 25.97171051482822 25.8757212060136 24.50221818399515 86-87 23.52846028101525 26.03473071451746 25.83036449624398 24.606444508223316 88-89 23.428692064617167 25.894120930447695 25.87213454231903 24.80505246261611 90-91 23.361617829395552 25.826621824248363 25.939040578636057 24.872719767720024 92-93 23.449824491368034 25.755342058604757 25.99370944627845 24.801124003748757 94-95 23.3536092409136 25.73370995492667 26.001478493806644 24.91120231035309 96-97 23.21282165905714 25.648025358015502 26.03030966182039 25.10884332110697 98-99 23.043356557908492 25.684112944251048 25.9399032946645 25.332627203175967 100-101 23.05379641533868 25.682202048542656 25.961698963447205 25.302302572671458 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 34.5 2 38.0 3 52.5 4 49.5 5 53.5 6 95.0 7 249.0 8 394.0 9 420.5 10 378.5 11 306.0 12 283.5 13 316.0 14 364.0 15 399.5 16 441.0 17 485.5 18 592.0 19 695.5 20 761.0 21 881.0 22 1064.0 23 1321.0 24 1640.5 25 2176.0 26 3101.0 27 4637.0 28 6816.5 29 10020.0 30 14758.5 31 20541.5 32 28240.0 33 35120.5 34 41018.5 35 48389.0 36 57368.0 37 65968.5 38 73887.0 39 81935.5 40 88176.5 41 94389.5 42 100977.0 43 108021.5 44 115209.5 45 123185.5 46 129361.5 47 133512.0 48 139249.5 49 142273.0 50 141060.5 51 139091.0 52 137291.0 53 136378.0 54 134480.0 55 128198.0 56 118123.0 57 106470.0 58 96274.5 59 85001.0 60 70722.5 61 57953.5 62 47216.5 63 35754.5 64 25125.0 65 17894.0 66 13352.0 67 10168.5 68 7554.5 69 5585.5 70 4119.0 71 3020.0 72 2192.0 73 1648.0 74 1300.5 75 952.0 76 657.5 77 377.5 78 190.0 79 102.0 80 61.5 81 44.5 82 28.0 83 21.0 84 16.5 85 13.5 86 9.5 87 5.5 88 3.5 89 2.0 90 3.0 91 2.5 92 1.0 93 0.0 94 0.0 95 0.0 96 1.0 97 2.0 98 1.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15981232727519826 2 8.104389524390784E-4 3 0.0060159506854131585 4 0.0038028289306756757 5 0.026962680533069338 6 0.0014961949891182985 7 9.351218681989366E-5 8 0.0018390730074579085 9 0.0 10-11 0.1082403562440269 12-13 1.870243736397873E-4 14-15 0.005501633657903743 16-17 3.117072893996456E-5 18-19 3.740487472795746E-4 20-21 5.922438498593265E-4 22-23 1.2468291575985823E-4 24-25 0.0015585364469982274 26-27 0.002649511959896987 28-29 0.007153682291721865 30-31 0.016317876600071442 32-33 0.015912657123851905 34-35 0.011455242885436975 36-37 6.545853077392556E-4 38-39 2.3378046704973415E-4 40-41 0.00554838975131369 42-43 0.008821316290009968 44-45 0.00883690165447995 46-47 0.01013048690548848 48-49 0.012624145220685643 50-51 0.006545853077392557 52-53 0.0017611461851079972 54-55 9.03951139258972E-4 56-57 0.0064523408905726625 58-59 0.009584999149039099 60-61 0.008042048066510855 62-63 0.01821929106540928 64-65 0.03377348480645159 66-67 0.0361424602058889 68-69 0.02657304642131978 70-71 0.04055311835089388 72-73 0.025700266011000773 74-75 0.0240949734705926 76-77 0.24493958801024146 78-79 0.07117835953440906 80-81 0.05336428794521931 82-83 0.02032331526885689 84-85 0.0314824362293642 86-87 0.0816049683648272 88-89 0.2628004156928411 90-91 0.3202168984002558 92-93 0.05433058054235821 94-95 0.004472999602884913 96-97 0.009849950345028799 98-99 0.0013091706154785112 100-101 0.0016364632693481392 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3208138.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.61817783135762 #Duplication Level Percentage of deduplicated Percentage of total 1 76.56504452313814 42.584082619537114 2 12.570357362436793 13.982807423754501 3 4.282579712055205 7.145678400061521 4 1.9961077777021368 4.440795094031741 5 1.111455168318742 3.090855560156665 6 0.7048313909880702 2.352086258705859 7 0.5111687228099628 1.9901191048950724 8 0.3676764487630144 1.635959528936271 9 0.26886889584300255 1.34585982560852 >10 1.511436411294441 15.130103807910022 >50 0.08176187943563022 3.104797689905393 >100 0.02708185624372622 2.4619698558338694 >500 0.0011240351534756482 0.4109853578427927 >1k 5.058158176433519E-4 0.3238994728206919 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.117072893996455E-5 5 0.0 0.0 0.0 0.0 3.117072893996455E-5 6 0.0 0.0 0.0 0.0 3.117072893996455E-5 7 0.0 0.0 0.0 0.0 3.117072893996455E-5 8 0.0 0.0 0.0 0.0 3.117072893996455E-5 9 0.0 0.0 0.0 0.0 3.117072893996455E-5 10-11 3.117072893996455E-5 0.0 0.0 0.0 3.117072893996455E-5 12-13 3.117072893996455E-5 0.0 0.0 0.0 1.7143900916980503E-4 14-15 4.675609340994682E-5 0.0 0.0 0.0 2.026097381097696E-4 16-17 6.23414578799291E-5 0.0 0.0 0.0 2.1819510257975187E-4 18-19 6.23414578799291E-5 0.0 0.0 1.5585364469982275E-5 2.1819510257975187E-4 20-21 6.23414578799291E-5 0.0 0.0 3.117072893996455E-5 2.1819510257975187E-4 22-23 6.23414578799291E-5 0.0 0.0 6.23414578799291E-5 2.493658315197164E-4 24-25 7.792682234991138E-5 0.0 0.0 2.1819510257975187E-4 2.8053656045968096E-4 26-27 9.351218681989366E-5 0.0 0.0 4.6756093409946824E-4 2.8053656045968096E-4 28-29 9.351218681989366E-5 0.0 0.0 0.001994926652157731 2.8053656045968096E-4 30-31 1.246829157598582E-4 0.0 0.0 0.008603121187430217 3.117072893996455E-4 32-33 1.246829157598582E-4 0.0 0.0 0.025778192833350685 4.052194762195392E-4 34-35 1.5585364469982276E-4 0.0 0.0 0.04907831271597419 4.3639020515950374E-4 36-37 1.870243736397873E-4 0.0 0.0 0.08610913869665207 4.51975569629486E-4 38-39 1.870243736397873E-4 0.0 0.0 0.1434944506751268 4.831462985694506E-4 40-41 1.870243736397873E-4 0.0 0.0 0.20468259158427723 4.987316630394328E-4 42-43 1.870243736397873E-4 0.0 0.0 0.27314909770090934 4.987316630394328E-4 44-45 1.870243736397873E-4 0.0 0.0 0.3608167728445597 4.987316630394328E-4 46-47 1.870243736397873E-4 0.0 0.0 0.45992410550917695 4.987316630394328E-4 48-49 1.870243736397873E-4 0.0 0.0 0.5689904860701129 5.299023919793974E-4 50-51 1.870243736397873E-4 0.0 0.0 0.6799426957319168 5.922438498593265E-4 52-53 2.8053656045968096E-4 1.5585364469982275E-5 0.0 0.7980641730499125 6.701706722092378E-4 54-55 2.8053656045968096E-4 3.117072893996455E-5 0.0 0.936462209543355 7.792682234991138E-4 56-57 2.8053656045968096E-4 3.117072893996455E-5 0.0 1.1014177070936473 7.792682234991138E-4 58-59 2.8053656045968096E-4 3.117072893996455E-5 0.0 1.2753192038497096 7.792682234991138E-4 60-61 2.8053656045968096E-4 3.117072893996455E-5 0.0 1.4564367243553737 7.792682234991138E-4 62-63 2.8053656045968096E-4 3.117072893996455E-5 0.0 1.646219707506348 7.792682234991138E-4 64-65 2.8053656045968096E-4 3.117072893996455E-5 0.0 1.8588975910637262 7.94853587969096E-4 66-67 2.8053656045968096E-4 3.117072893996455E-5 0.0 2.1062684959312845 8.260243169090607E-4 68-69 2.8053656045968096E-4 3.117072893996455E-5 0.0 2.3734172283112507 8.416096813790429E-4 70-71 2.8053656045968096E-4 3.117072893996455E-5 0.0 2.6533459595566025 8.416096813790429E-4 72-73 2.8053656045968096E-4 3.117072893996455E-5 0.0 2.948454835795717 9.818779616088834E-4 74-75 2.8053656045968096E-4 3.117072893996455E-5 0.0 3.2733785142659073 9.974633260788656E-4 76-77 2.8053656045968096E-4 3.117072893996455E-5 0.0 3.6418477010652284 9.974633260788656E-4 78-79 2.8053656045968096E-4 3.117072893996455E-5 0.0 4.043653982465841 9.974633260788656E-4 80-81 2.8053656045968096E-4 3.117072893996455E-5 0.0 4.465955018144481 0.0010286340550188303 82-83 2.8053656045968096E-4 3.117072893996455E-5 0.0 4.897856638336631 0.0010598047839587947 84-85 2.8053656045968096E-4 3.117072893996455E-5 0.0 5.360726377730634 0.0010909755128987594 86-87 2.8053656045968096E-4 3.117072893996455E-5 0.0 5.8688716009099355 0.0011221462418387238 88-89 2.8053656045968096E-4 3.117072893996455E-5 0.0 6.4223390639679465 0.0011221462418387238 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2900 0.0 52.283226 1 GTATCAA 5095 0.0 43.565468 1 TCAACGC 6735 0.0 31.990213 4 CAACGCA 6890 0.0 31.26113 5 TATCAAC 7110 0.0 30.636698 2 ATCAACG 7130 0.0 30.417643 3 AACGCAG 7365 0.0 29.049932 6 GTACATG 9820 0.0 25.604355 1 ACGCAGA 8565 0.0 24.5358 7 TACATGG 10295 0.0 24.29311 2 CGCAGAG 8965 0.0 23.069824 8 ACATGGG 10855 0.0 22.34035 3 CATGGGG 8915 0.0 20.920404 4 GCAGAGT 10150 0.0 19.533289 9 AGAGTAC 8560 0.0 19.27352 10-11 ATGGGGG 5495 0.0 18.084408 5 GTATATG 1085 0.0 17.522655 1 CAGAGTA 9135 0.0 17.279646 10-11 TAAGTAC 1985 0.0 16.521835 1 TACACCG 440 9.458745E-11 16.209301 5 >>END_MODULE