##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921376_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1972762 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43540325695649 33.0 31.0 34.0 29.0 34.0 2 31.566033814519947 34.0 31.0 34.0 29.0 34.0 3 31.631926709861606 34.0 31.0 34.0 28.0 34.0 4 35.14229542134328 37.0 35.0 37.0 33.0 37.0 5 34.89195300801617 37.0 35.0 37.0 32.0 37.0 6 34.849937802938214 37.0 35.0 37.0 32.0 37.0 7 34.72134854584588 37.0 35.0 37.0 32.0 37.0 8 34.67950264654327 37.0 35.0 37.0 32.0 37.0 9 36.29528194480632 39.0 37.0 39.0 32.0 39.0 10-11 36.14894270064002 39.0 37.0 39.0 32.0 39.0 12-13 36.083518691053456 39.0 37.0 39.0 32.0 39.0 14-15 37.298324379727504 40.0 38.0 41.0 31.5 41.0 16-17 37.27434758982584 40.0 38.0 41.0 31.0 41.0 18-19 37.248320628641466 40.0 38.0 41.0 31.0 41.0 20-21 37.21083131163313 40.0 38.0 41.0 31.0 41.0 22-23 37.10424369488058 40.0 37.0 41.0 31.0 41.0 24-25 37.02725341424865 40.0 37.0 41.0 31.0 41.0 26-27 36.88341396478643 40.0 37.0 41.0 30.0 41.0 28-29 36.7190791387912 40.0 37.0 41.0 30.0 41.0 30-31 36.56713937109494 40.0 36.5 41.0 30.0 41.0 32-33 36.49148173981453 40.0 36.0 41.0 30.0 41.0 34-35 36.60753324526729 40.0 37.0 41.0 30.0 41.0 36-37 36.56909272380551 40.0 37.0 41.0 30.0 41.0 38-39 36.467873215319436 40.0 36.0 41.0 30.0 41.0 40-41 36.33354530348821 40.0 36.0 41.0 29.5 41.0 42-43 36.214380143169834 40.0 36.0 41.0 29.0 41.0 44-45 36.04874536310006 40.0 36.0 41.0 28.0 41.0 46-47 35.85843477317589 40.0 35.0 41.0 27.5 41.0 48-49 35.6792182736691 40.0 35.0 41.0 27.0 41.0 50-51 35.516928549921374 39.5 35.0 41.0 26.5 41.0 52-53 35.34399081085301 39.0 35.0 41.0 26.0 41.0 54-55 35.13462216932402 39.0 35.0 41.0 26.0 41.0 56-57 34.861593035551174 39.0 35.0 41.0 25.0 41.0 58-59 34.6344031870038 38.0 34.5 40.0 25.0 41.0 60-61 34.361490387588574 38.0 34.0 40.0 24.0 41.0 62-63 34.06292269417193 37.0 34.0 40.0 23.0 41.0 64-65 33.747685225080374 37.0 34.0 40.0 23.0 41.0 66-67 33.40910713000352 36.0 34.0 39.0 22.0 41.0 68-69 33.03954481077798 36.0 33.0 39.0 22.0 41.0 70-71 32.65532461594455 35.0 33.0 38.5 20.5 40.0 72-73 32.257279134533206 35.0 33.0 37.5 19.5 40.0 74-75 31.84981918751476 35.0 32.5 37.0 18.0 39.0 76-77 29.085116450945428 33.0 28.5 34.5 10.5 36.5 78-79 30.741276190437567 34.5 31.5 36.0 12.0 37.0 80-81 30.942784279097022 35.0 32.0 35.5 12.5 37.0 82-83 30.780440570124526 35.0 32.0 35.0 9.5 37.0 84-85 30.549898061702322 35.0 32.0 35.0 7.0 36.0 86-87 30.305690955117747 35.0 32.0 35.0 2.0 36.0 88-89 30.02967286474496 35.0 31.0 35.0 2.0 36.0 90-91 29.838232386876875 34.0 31.0 35.0 2.0 35.0 92-93 29.686024467219056 34.0 31.0 35.0 2.0 35.0 94-95 29.580934496913464 34.0 31.0 35.0 2.0 35.0 96-97 29.385844820611915 34.0 31.0 35.0 2.0 35.0 98-99 29.1172062316691 34.0 31.0 35.0 2.0 35.0 100-101 28.01120003325287 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 32726.0 3 11312.0 4 6443.0 5 4647.0 6 4142.0 7 4303.0 8 4530.0 9 4951.0 10 5471.0 11 6057.0 12 6693.0 13 7324.0 14 8120.0 15 8983.0 16 10325.0 17 11523.0 18 10516.0 19 8661.0 20 8094.0 21 7940.0 22 8235.0 23 9198.0 24 10758.0 25 12834.0 26 15413.0 27 18474.0 28 22067.0 29 26625.0 30 32179.0 31 40341.0 32 50537.0 33 66899.0 34 97787.0 35 142687.0 36 239541.0 37 457112.0 38 485191.0 39 64123.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.634354577320345 20.163036193710067 14.240687562702323 24.961921666267266 2 15.53015172682278 21.386730036557992 37.465961325171484 25.61715691144774 3 17.931236556768646 25.07960116533774 29.678092431134413 27.3110698467592 4 13.696653130083506 17.34808349457768 35.02972353839626 33.925539836942555 5 14.391831320707265 37.5116620086238 33.79822494087868 14.298281729790247 6 33.19665337716419 35.196415129249495 17.050389433958436 14.556542059627878 7 28.36572701913714 32.66822488887402 20.823404355621385 18.142643736367457 8 26.81097746121751 34.67772881581035 19.88708051216257 18.62421321080957 9 27.034077095970016 15.593011219802491 19.643626549984237 37.729285134243256 10-11 25.61648996969278 25.67626712472138 27.52283824773774 21.1844046578481 12-13 26.119937316104302 23.19022808452441 27.498465978171144 23.19136862120014 14-15 23.60468756138579 24.90087660490174 25.02454164221796 26.469894191494515 16-17 23.375837344221658 27.807026214608506 25.961079809707744 22.856056631462092 18-19 23.44258609620735 27.085293900720796 27.508763783744467 21.96335621932739 20-21 23.885415296428853 26.047127816797083 27.573810354777855 22.49364653199621 22-23 23.926242290926428 25.709229699661364 27.163134426372437 23.201393583039774 24-25 23.62361568248558 26.041162393301036 27.08826834786232 23.246953576351064 26-27 23.2749548588687 26.338494106053524 27.24423151596136 23.14231951911642 28-29 23.332441122988662 26.78301393723807 26.936337243343782 22.948207696429485 30-31 24.050802332204544 26.190887205549796 26.738754002915638 23.019556459330023 32-33 23.691111387694047 26.22869786809478 26.60763620702723 23.472554537183942 34-35 23.93363205011182 26.384927924459145 26.761293828770246 22.920146196658788 36-37 23.80253453301229 26.38291724749715 26.89646432644785 22.918083893042706 38-39 23.796246521048086 26.37646866199655 26.77167709243386 23.0556077245215 40-41 23.964803824282725 26.184804001708358 26.679111807295484 23.171280366713432 42-43 23.765203346662663 26.251703342607087 26.346198301524087 23.63689500920616 44-45 23.595597039818877 26.247299225076574 26.62920983766454 23.527893897440006 46-47 23.736815703618312 26.17321258696484 26.33972171759149 23.750249991825363 48-49 23.428940642489433 26.45545911710871 26.47036382960872 23.645236410793142 50-51 23.663620429852696 26.337608879414898 26.57345883271382 23.42531185801858 52-53 23.952260934626434 26.149476561343604 26.344511447115764 23.553751056914194 54-55 23.189997052320923 26.041946258969446 26.77306191367989 23.99499477502974 56-57 23.404437061199122 26.213624470219905 26.353969780007397 24.02796868857358 58-59 23.445608069059077 26.225202426071135 26.580905538555754 23.74828396631403 60-61 23.691738665587884 26.10092066355098 26.68697489961214 23.520365771248997 62-63 23.556637721131676 26.120998335769052 26.748310735873996 23.57405320722527 64-65 23.195374170219218 25.874099987982092 26.751305869962177 24.179219971836513 66-67 23.34429769236289 26.127189438312616 26.35624675614118 24.172266113183323 68-69 23.1846084458537 26.135553799478096 26.5366797510494 24.143158003618804 70-71 23.159850386774682 25.933821174617478 26.473406530656334 24.432921907951506 72-73 23.139338256731644 26.204977652030838 26.30562590792586 24.350058183311656 74-75 23.062187856509063 26.237799467613133 26.28097350741539 24.419039168462415 76-77 22.98319160121259 25.83982919477573 26.436544756462048 24.74043444754963 78-79 22.8809881615908 25.889453226553037 26.57901044341722 24.65054816843894 80-81 23.120690398480434 26.068020379232255 26.31380873040629 24.49748049188102 82-83 23.001065996732294 26.084141492370073 26.42077337365784 24.494019137239793 84-85 22.962439173173497 26.13954351578994 26.26671794886097 24.631299362175596 86-87 22.68019819385161 26.324609019174822 26.214822633346195 24.780370153627377 88-89 22.588564880828795 25.990984111268638 26.322999969758985 25.097451038143575 90-91 22.661765958555875 25.74593193338529 26.453296853486037 25.1390052545728 92-93 22.798074228670764 25.677804813413957 26.426000195265196 25.098120762650076 94-95 22.556835204141375 25.717514828834116 26.46898098370894 25.256668983315567 96-97 22.304700134138912 25.55589577518197 26.60814607453581 25.531258016143312 98-99 22.023024268981615 25.552219255965486 26.484169642850354 25.94058683220255 100-101 22.044197634749814 25.579298738296675 26.489940336488015 25.886563290465496 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 140.0 1 109.0 2 89.5 3 107.0 4 106.5 5 107.5 6 171.5 7 397.5 8 587.0 9 611.0 10 539.5 11 424.5 12 422.0 13 485.0 14 505.0 15 545.5 16 611.5 17 683.0 18 799.0 19 896.5 20 1003.0 21 1141.0 22 1318.5 23 1632.0 24 1960.0 25 2503.0 26 3362.0 27 4526.0 28 6346.0 29 8868.5 30 12044.0 31 15942.5 32 21392.0 33 25482.5 34 28395.5 35 32331.0 36 37224.5 37 42592.5 38 47341.5 39 51648.0 40 55364.5 41 58687.0 42 62496.0 43 66506.5 44 70609.5 45 76289.0 46 79965.0 47 82081.5 48 85132.5 49 87170.0 50 87132.5 51 85523.5 52 84008.0 53 82642.0 54 80166.5 55 74891.5 56 68328.5 57 61314.5 58 53881.0 59 46071.0 60 37799.0 61 31244.0 62 25794.5 63 19521.5 64 13752.5 65 10160.5 66 7828.5 67 5937.0 68 4546.0 69 3481.0 70 2556.0 71 1867.5 72 1329.0 73 1022.0 74 805.0 75 567.5 76 384.5 77 231.5 78 121.5 79 82.5 80 51.5 81 31.0 82 23.5 83 11.5 84 8.0 85 5.5 86 3.0 87 3.0 88 3.5 89 3.5 90 1.0 91 0.0 92 1.0 93 1.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15906632427023634 2 3.0414211141536584E-4 3 0.005829390468794512 4 0.004207299207912561 5 0.027676932138798297 6 0.0013686395013691463 7 5.0690351902560976E-5 8 0.0014700202051742685 9 0.0 10-11 0.10693129733845239 12-13 3.294872873666464E-4 14-15 0.004790238254792013 16-17 3.5483246331792685E-4 18-19 6.336293987820122E-4 20-21 0.0010391522140025002 22-23 2.787969354640854E-4 24-25 0.0019769237241998782 26-27 0.0030414211141536586 28-29 0.00674181680304061 30-31 0.014877618283401646 32-33 0.014066572652960671 34-35 0.010822390131196768 36-37 6.082842228307317E-4 38-39 2.787969354640854E-4 40-41 0.005297141773817622 42-43 0.008617359823435367 44-45 0.009124263342460977 46-47 0.010011344500755793 48-49 0.011734816465442867 50-51 0.005550593533330427 52-53 0.0019262333722973172 54-55 0.001191223269710183 56-57 0.006463019867576525 58-59 0.009631166861486585 60-61 0.00826252736011744 62-63 0.019236988547021893 64-65 0.03573669809130549 66-67 0.03885415473331299 68-69 0.028564013297093113 70-71 0.04448078379449726 72-73 0.027727622490700855 74-75 0.02595346017411122 76-77 0.2487122116099154 78-79 0.07220840628519812 80-81 0.05814183363223745 82-83 0.02177150614214994 84-85 0.033835809894959455 86-87 0.08422201968610507 88-89 0.265389337385858 90-91 0.32337909996238773 92-93 0.054973686638327385 94-95 0.004308679911717683 96-97 0.009124263342460977 98-99 8.870811582948171E-4 100-101 0.0016220912608819512 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1972762.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.10318224057077 #Duplication Level Percentage of deduplicated Percentage of total 1 80.15946435545507 50.58317287528817 2 11.37470421321784 14.355600657985468 3 3.417815221799976 6.470250504175221 4 1.6277894659580805 4.1087478127853645 5 0.8941730266182559 2.8212581726647272 6 0.5688918568912054 2.153933191234946 7 0.3712698751083716 1.6399817412578264 8 0.281014768486006 1.4186340918451392 9 0.21156401810052605 1.2015326510770414 >10 1.0395036937245359 11.092858458493575 >50 0.03753015191377032 1.5878687697688774 >100 0.014990598455518738 1.8124863102158915 >500 0.0010471128451759284 0.49613025112426756 >1k 2.4164142580982903E-4 0.25754451208346063 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1973 0.10001206430375281 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 5.0690351902560976E-5 10-11 0.0 0.0 0.0 2.5345175951280488E-5 5.0690351902560976E-5 12-13 0.0 5.0690351902560976E-5 0.0 5.0690351902560976E-5 5.0690351902560976E-5 14-15 0.0 5.0690351902560976E-5 0.0 5.0690351902560976E-5 5.0690351902560976E-5 16-17 0.0 5.0690351902560976E-5 0.0 5.0690351902560976E-5 5.0690351902560976E-5 18-19 0.0 5.0690351902560976E-5 0.0 7.603552785384146E-5 5.0690351902560976E-5 20-21 0.0 5.0690351902560976E-5 0.0 1.774162316589634E-4 5.0690351902560976E-5 22-23 0.0 5.0690351902560976E-5 0.0 2.534517595128049E-4 5.0690351902560976E-5 24-25 0.0 5.0690351902560976E-5 5.0690351902560976E-5 4.562131671230488E-4 1.2672587975640244E-4 26-27 0.0 5.0690351902560976E-5 5.0690351902560976E-5 0.0015714009089793902 1.774162316589634E-4 28-29 0.0 5.0690351902560976E-5 5.0690351902560976E-5 0.004714202726938171 2.027614076102439E-4 30-31 0.0 5.0690351902560976E-5 5.0690351902560976E-5 0.016575745072137438 2.027614076102439E-4 32-33 0.0 5.0690351902560976E-5 5.0690351902560976E-5 0.04516510354518183 2.027614076102439E-4 34-35 0.0 7.603552785384146E-5 5.0690351902560976E-5 0.09045693297012006 2.027614076102439E-4 36-37 0.0 1.2672587975640244E-4 5.0690351902560976E-5 0.1527807206343188 2.534517595128049E-4 38-39 0.0 1.5207105570768292E-4 5.0690351902560976E-5 0.2392838061560391 2.534517595128049E-4 40-41 0.0 1.5207105570768292E-4 5.0690351902560976E-5 0.33480977431641523 2.7879693546408536E-4 42-43 0.0 1.5207105570768292E-4 5.0690351902560976E-5 0.4438700664347752 3.294872873666464E-4 44-45 0.0 1.5207105570768292E-4 5.0690351902560976E-5 0.5851187320112614 3.5483246331792685E-4 46-47 0.0 1.5207105570768292E-4 5.0690351902560976E-5 0.7462887058854539 3.8017763926920733E-4 48-49 0.0 1.5207105570768292E-4 5.0690351902560976E-5 0.9009703147161188 4.055228152204878E-4 50-51 0.0 1.5207105570768292E-4 5.0690351902560976E-5 1.0578316086785937 4.055228152204878E-4 52-53 0.0 1.5207105570768292E-4 5.0690351902560976E-5 1.2214600646200606 4.562131671230488E-4 54-55 0.0 1.5207105570768292E-4 5.0690351902560976E-5 1.4288596394293889 5.069035190256098E-4 56-57 0.0 1.5207105570768292E-4 5.0690351902560976E-5 1.6720466026819252 5.322486949768902E-4 58-59 0.0 2.027614076102439E-4 5.0690351902560976E-5 1.9211136467551584 6.082842228307317E-4 60-61 0.0 2.027614076102439E-4 5.0690351902560976E-5 2.169318954846048 6.082842228307317E-4 62-63 0.0 2.027614076102439E-4 5.0690351902560976E-5 2.431971013229168 7.096649266358537E-4 64-65 0.0 2.027614076102439E-4 5.0690351902560976E-5 2.7339080943367726 7.603552785384147E-4 66-67 0.0 2.027614076102439E-4 5.0690351902560976E-5 3.0999938157770677 8.110456304409756E-4 68-69 0.0 2.027614076102439E-4 5.0690351902560976E-5 3.4901321091951285 8.110456304409756E-4 70-71 0.0 2.027614076102439E-4 5.0690351902560976E-5 3.8905098536975062 9.124263342460976E-4 72-73 0.0 2.027614076102439E-4 5.0690351902560976E-5 4.302774485721034 0.0011151877418563415 74-75 0.0 2.027614076102439E-4 5.0690351902560976E-5 4.752499287800555 0.0011151877418563415 76-77 0.0 2.027614076102439E-4 5.0690351902560976E-5 5.283810211267249 0.0011151877418563415 78-79 0.0 2.027614076102439E-4 5.0690351902560976E-5 5.8707031055951 0.0011151877418563415 80-81 0.0 2.027614076102439E-4 5.0690351902560976E-5 6.464540578133601 0.0011151877418563415 82-83 0.0 2.027614076102439E-4 5.0690351902560976E-5 7.060456355100108 0.0011658780937589025 84-85 0.0 2.027614076102439E-4 5.0690351902560976E-5 7.705415047532343 0.001191223269710183 86-87 0.0 3.0414211141536584E-4 5.0690351902560976E-5 8.42088401946104 0.0012672587975640244 88-89 0.0 3.0414211141536584E-4 5.0690351902560976E-5 9.190591667925478 0.0013179491494665855 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2290 0.0 60.81629 1 GTATCAA 4395 0.0 41.421677 1 TATCAAC 5745 0.0 31.472303 2 TCAACGC 5735 0.0 31.278933 4 CAACGCA 5815 0.0 30.907383 5 ATCAACG 5855 0.0 30.799969 3 AACGCAG 6180 0.0 29.232105 6 ACGCAGA 7250 0.0 24.589361 7 GTGGTAT 1245 0.0 23.670645 1 CGCAGAG 7500 0.0 23.452785 8 GTACATG 6820 0.0 23.347921 1 TACATGG 7055 0.0 22.399628 2 TGGTATC 1185 0.0 21.62564 2 ACATGGG 7235 0.0 21.317604 3 GCAGAGT 8135 0.0 20.453352 9 CATGGGG 6135 0.0 20.189219 4 TAAGGTG 825 0.0 19.018671 5 ATGGGGG 4175 0.0 19.01867 5 CAGAGTA 7460 0.0 18.703514 10-11 AGAGTAC 7090 0.0 18.606758 10-11 >>END_MODULE