##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921375_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3188397 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.386519307350998 31.0 31.0 34.0 26.0 34.0 2 30.422498829349042 31.0 31.0 34.0 26.0 34.0 3 30.47024037470867 33.0 31.0 34.0 26.0 34.0 4 33.939351341755746 37.0 35.0 37.0 30.0 37.0 5 33.938772367431035 37.0 35.0 37.0 30.0 37.0 6 33.978852382560895 37.0 35.0 37.0 30.0 37.0 7 33.898905939254114 37.0 35.0 37.0 30.0 37.0 8 33.86428697555543 37.0 35.0 37.0 30.0 37.0 9 35.417216237501165 39.0 37.0 39.0 30.0 39.0 10-11 35.30477587954073 39.0 35.5 39.0 29.0 39.0 12-13 35.18118022943818 39.0 35.0 39.0 28.5 39.0 14-15 36.297848730882635 40.0 36.5 41.0 28.0 41.0 16-17 36.23616757888055 40.0 36.0 41.0 27.0 41.0 18-19 36.18307303011514 40.0 36.5 41.0 27.0 41.0 20-21 36.12091389497606 40.0 36.0 41.0 27.0 41.0 22-23 36.00791573320386 40.0 36.0 41.0 27.0 41.0 24-25 35.9029520163267 40.0 36.0 41.0 27.0 41.0 26-27 35.74850010836166 40.0 36.0 41.0 27.0 41.0 28-29 35.60507835128436 40.0 36.0 41.0 26.0 41.0 30-31 35.45747204629787 40.0 35.5 41.0 25.0 41.0 32-33 35.277306903751324 39.0 35.0 41.0 25.0 41.0 34-35 35.122772979650904 39.0 35.0 41.0 24.5 41.0 36-37 34.957959752188955 39.0 35.0 41.0 24.0 41.0 38-39 35.196842645379476 39.0 35.0 41.0 24.5 41.0 40-41 35.32244980785015 40.0 35.0 41.0 24.5 41.0 42-43 35.16134894744914 40.0 35.0 41.0 24.0 41.0 44-45 35.046430855379676 40.0 35.0 41.0 23.0 41.0 46-47 34.897569687840004 39.5 35.0 41.0 23.0 41.0 48-49 34.755135417578174 39.0 35.0 41.0 22.0 41.0 50-51 33.04043630702199 37.0 32.5 39.5 18.5 40.0 52-53 33.193561059052556 37.5 33.0 39.5 18.5 40.0 54-55 34.04324147839808 38.5 34.0 40.5 19.5 41.0 56-57 34.05643980344982 38.5 34.0 41.0 19.0 41.0 58-59 33.871015905484796 38.0 34.0 40.5 18.0 41.0 60-61 33.61774929533556 37.5 34.0 40.0 17.0 41.0 62-63 33.31629781360351 37.0 33.5 40.0 13.5 41.0 64-65 33.02416355303308 36.5 33.0 40.0 12.5 41.0 66-67 32.683632402113034 36.0 33.0 39.0 8.0 41.0 68-69 32.312191204545734 35.5 33.0 39.0 7.0 41.0 70-71 31.932299992754977 35.0 32.0 38.5 4.0 40.5 72-73 31.577919562714428 35.0 32.0 37.0 2.0 39.5 74-75 31.179926150978062 35.0 32.0 37.0 2.0 39.0 76-77 30.810567661429864 35.0 32.0 36.0 2.0 39.0 78-79 30.476351596115542 35.0 31.0 36.0 2.0 37.5 80-81 30.135813545176465 35.0 31.0 35.5 2.0 37.0 82-83 29.83981809667993 35.0 31.0 35.0 2.0 37.0 84-85 29.614396199720424 35.0 31.0 35.0 2.0 36.0 86-87 29.394910671412624 35.0 31.0 35.0 2.0 36.0 88-89 29.198278790251027 35.0 31.0 35.0 2.0 36.0 90-91 28.940868405032372 34.5 30.0 35.0 2.0 35.0 92-93 28.740938001133486 34.0 30.0 35.0 2.0 35.0 94-95 28.52194315827044 34.0 30.0 35.0 2.0 35.0 96-97 28.25739486017582 34.0 29.5 35.0 2.0 35.0 98-99 28.022523543962684 34.0 29.0 35.0 2.0 35.0 100-101 26.975135467760133 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 111949.0 3 19361.0 4 13387.0 5 10070.0 6 9112.0 7 9359.0 8 9717.0 9 10414.0 10 11292.0 11 11854.0 12 12155.0 13 12004.0 14 12663.0 15 13695.0 16 13716.0 17 14134.0 18 13311.0 19 12884.0 20 13064.0 21 13985.0 22 15507.0 23 17539.0 24 20510.0 25 24344.0 26 29091.0 27 34314.0 28 41138.0 29 48478.0 30 57995.0 31 71237.0 32 88500.0 33 114943.0 34 165132.0 35 234175.0 36 382203.0 37 686271.0 38 696015.0 39 112874.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.48119804342669 17.101063262286008 12.00390611761782 25.41383257666948 2 16.70034454049708 19.6397497868393 38.479515390092715 25.180390282570908 3 19.68501565037302 23.916845135832688 28.77537988436767 27.62275932942662 4 14.001000421130852 15.372531347888604 35.36181165346265 35.26465657751789 5 14.68721847403395 37.38291422344097 33.42571228913107 14.504155013394007 6 34.034843039438314 33.75857438220688 17.373901254109757 14.832681324245044 7 29.468402793026215 31.620701769794913 20.66353193598374 18.247363501195128 8 27.69824581436356 33.70647043193829 19.875228492098024 18.720055261600123 9 28.4448903189498 14.946374284250643 18.589265194841616 38.01947020195794 10-11 26.480437218262644 24.618733547103027 27.208203661670012 21.692625572964317 12-13 27.023585418417294 22.178519087516193 27.016683547492637 23.781211946573872 14-15 24.41858239501474 23.591282697337146 24.256219416723276 27.733915490924836 16-17 24.549556120894742 26.372649505077227 25.114063925995154 23.963730448032873 18-19 24.546062001593647 26.12540233274565 26.17611351273348 23.152422152927226 20-21 25.009901831866344 25.222102990659103 26.209117591096458 23.55887758637809 22-23 24.99415580849879 24.915208233642147 25.86730155243691 24.223334405422154 24-25 24.686043921219174 25.15529938156363 25.769013545356707 24.389643151860486 26-27 24.337145470103838 25.484880737715525 25.88650807905798 24.291465713122655 28-29 24.35886375892129 25.961065193856836 25.51391440767265 24.16615663954922 30-31 25.04772992508288 25.39206920223545 25.460105812770085 24.100095059911585 32-33 24.659651073048945 25.420075383729152 25.473524339114174 24.44674920410773 34-35 24.863550939283638 25.62395813549442 25.588952899608213 23.923538025613734 36-37 24.806247988774142 25.603618669696026 25.746529400436714 23.843603941093118 38-39 24.76883794873291 25.615244156903668 25.614538426324312 24.001379468039108 40-41 24.814782520601238 25.37560232338512 25.58383378618998 24.225781369823657 42-43 24.507452624035565 25.4383686182806 25.389100915499213 24.665077842184626 44-45 24.28620762361021 25.481342243581345 25.722857853012332 24.509592279796117 46-47 24.39884356734335 25.36633461127522 25.499308654390045 24.735513166991392 48-49 24.265720806181086 25.562005318501235 25.642324899934405 24.529948975383274 50-51 24.395327246265737 25.41156681107387 25.927511072501968 24.265594870158427 52-53 24.633334045631496 25.195085896873472 25.779447977303665 24.392132080191363 54-55 23.84057283316228 25.162685271719287 26.19671248167159 24.800029413446847 56-57 24.090419961859364 25.318708146181475 25.751310220157215 24.83956167180195 58-59 24.294163141895215 25.37543176420638 25.866223256232 24.464181837666402 60-61 24.63243260996065 25.228504400688724 26.059943777663904 24.079119211686727 62-63 24.418389044663975 25.17003788257345 26.117887903535518 24.293685169227057 64-65 24.04254503364186 24.970654316808925 26.183200660988927 24.80359998856029 66-67 24.19714271124257 25.18485173444577 25.867662828927983 24.750342725383675 68-69 24.064837670142715 25.272314757931092 26.000147694009435 24.66269987791676 70-71 24.038170608367633 25.05505436628489 25.991442026943258 24.915332998404217 72-73 23.98169500323486 25.527498814618234 25.755510022092565 24.735296160054347 74-75 23.96950481777815 25.439103507250742 25.93366201256828 24.657729662402822 76-77 23.948177305694355 24.96123823969999 25.9315822920537 25.159002162551953 78-79 23.86036487935623 25.14094382864348 26.104607381314267 24.89408391068602 80-81 24.200769358551984 25.33178332170091 25.71949577578873 24.747951543958376 82-83 24.145919441781523 25.407631500369316 25.891562288821486 24.554886769027675 84-85 24.0702169260734 25.491807323356852 25.70626929206964 24.731706458500106 86-87 23.79839882911078 25.722988257158054 25.68913281017185 24.789480103559317 88-89 23.745210580432545 25.36342063811147 25.91169896181698 24.979669819639003 90-91 24.0655102732691 25.082833227216483 26.035653061862796 24.81600343765162 92-93 24.286587742681824 24.96859596620058 25.959237626999297 24.785578664118297 94-95 24.191611589377686 25.00517565391263 25.932501927606864 24.870710829102816 96-97 23.937800784249614 24.90233820823564 26.070774244104573 25.089086763410172 98-99 23.672118933982585 24.884972694129452 26.007605877540502 25.43530249434746 100-101 24.026010058257917 24.96842352141518 26.024268655745097 24.981297764581807 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 132.0 1 103.0 2 118.0 3 153.0 4 138.5 5 168.0 6 260.5 7 486.5 8 696.5 9 785.5 10 738.0 11 638.5 12 623.0 13 686.5 14 779.5 15 837.5 16 933.5 17 1021.0 18 1136.0 19 1251.5 20 1348.5 21 1446.5 22 1535.0 23 1681.5 24 1886.5 25 2116.5 26 2502.5 27 3172.5 28 4178.0 29 5876.0 30 8689.5 31 13072.5 32 19598.0 33 25263.0 34 30355.5 35 37326.0 36 45905.5 37 54560.5 38 62609.0 39 70763.5 40 78260.0 41 85374.5 42 91956.5 43 99488.0 44 107729.0 45 116293.5 46 124364.5 47 132047.0 48 140286.0 49 146428.5 50 148962.0 51 149528.0 52 148892.5 53 148076.5 54 145364.0 55 137947.5 56 128057.0 57 115770.0 58 103268.0 59 90021.5 60 75094.0 61 62018.0 62 50793.0 63 39600.5 64 29263.0 65 21753.0 66 16487.0 67 12482.5 68 9437.0 69 7192.0 70 5465.0 71 4072.5 72 2968.5 73 2172.0 74 1614.5 75 1185.0 76 855.0 77 567.5 78 362.5 79 256.5 80 193.5 81 156.5 82 120.0 83 95.0 84 84.0 85 70.0 86 56.5 87 55.5 88 56.5 89 47.5 90 34.5 91 29.5 92 32.5 93 26.0 94 17.5 95 14.5 96 15.0 97 10.0 98 4.5 99 7.5 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05021332036129754 2 0.05752106779676433 3 0.04930377239722657 4 0.054541514121359415 5 0.04779831369807461 6 0.017500957377641492 7 0.014333221364842583 8 0.02038641988434941 9 0.020511874775945405 10-11 0.021907560444950864 12-13 0.02683166494009372 14-15 0.04397193950439673 16-17 0.029168262296069152 18-19 0.023115063776562327 20-21 0.02683166494009372 22-23 0.04616740010732666 24-25 0.041619660286971796 26-27 0.031034403808559596 28-29 0.0206373296675414 30-31 0.012780717081342128 32-33 0.009675708514341219 34-35 0.009487526176947224 36-37 0.0013486400846569608 38-39 0.006633427393138307 40-41 0.0037009193020818925 42-43 0.2132576338517443 44-45 0.18799415505660053 46-47 0.19436099080509736 48-49 0.19161666505143493 50-51 0.19058166219576797 52-53 0.19473735547988535 54-55 0.19379644379291538 56-57 0.2035191978916051 58-59 0.20053964421620019 60-61 0.20591852269337854 62-63 0.20257828620463514 64-65 0.20380147139769608 66-67 0.19396894426885988 68-69 0.1926359860456524 70-71 0.17670321481296086 72-73 0.18435596320031664 74-75 0.18383846177248314 76-77 0.1823643667962302 78-79 0.20803557398906097 80-81 0.21689582570802818 82-83 0.21474741068944675 84-85 0.2105760355438799 86-87 0.22660289794526842 88-89 0.22475243829422745 90-91 0.22442311920378796 92-93 0.22823381153601638 94-95 0.23960316108690352 96-97 0.23991679831589355 98-99 0.22909631391573884 100-101 0.23922679641211558 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3188397.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.06431882576188 #Duplication Level Percentage of deduplicated Percentage of total 1 75.97460751654943 42.59464618469952 2 12.794717839470293 14.346542804754517 3 4.472553158611766 7.522519387487353 4 2.0567248933528757 4.61235520631267 5 1.2044594214404551 3.376359850816519 6 0.7607691652526385 2.5591203020119595 7 0.5079969952860932 1.993635385437401 8 0.3851433193567216 1.7274238280021974 9 0.2741004725673569 1.383053065587747 >10 1.482487054293087 14.625873623629419 >50 0.06448881179248123 2.4265328194281217 >100 0.020213268364475498 1.9314248439084236 >500 0.0011213442992294037 0.4400403961732614 >1k 6.16739363123741E-4 0.460472301750833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 3.136372289899909E-5 0.0 0.0 0.0 3 0.0 6.272744579799818E-5 0.0 0.0 0.0 4 0.0 6.272744579799818E-5 0.0 3.136372289899909E-5 6.272744579799818E-5 5 0.0 6.272744579799818E-5 0.0 3.136372289899909E-5 6.272744579799818E-5 6 0.0 6.272744579799818E-5 0.0 3.136372289899909E-5 9.409116869699727E-5 7 0.0 6.272744579799818E-5 0.0 3.136372289899909E-5 9.409116869699727E-5 8 0.0 6.272744579799818E-5 0.0 3.136372289899909E-5 1.2545489159599636E-4 9 0.0 6.272744579799818E-5 0.0 3.136372289899909E-5 1.8818233739399453E-4 10-11 0.0 6.272744579799818E-5 0.0 6.272744579799818E-5 2.1954606029299362E-4 12-13 0.0 7.840930724749772E-5 0.0 6.272744579799818E-5 2.822735060909918E-4 14-15 0.0 1.0977303014649681E-4 0.0 6.272744579799818E-5 3.920465362374886E-4 16-17 0.0 1.2545489159599636E-4 0.0 6.272744579799818E-5 4.3909212058598724E-4 18-19 0.0 1.2545489159599636E-4 0.0 9.409116869699727E-5 4.3909212058598724E-4 20-21 0.0 1.2545489159599636E-4 0.0 1.0977303014649681E-4 4.861377049344859E-4 22-23 0.0 1.2545489159599636E-4 0.0 1.8818233739399453E-4 5.331832892829845E-4 24-25 0.0 1.2545489159599636E-4 0.0 3.606828133384895E-4 5.645470121819836E-4 26-27 0.0 1.2545489159599636E-4 0.0 0.0011918214701619654 5.645470121819836E-4 28-29 0.0 1.2545489159599636E-4 0.0 0.003998874669622384 5.645470121819836E-4 30-31 0.0 1.2545489159599636E-4 0.0 0.015352542359060056 6.115925965304822E-4 32-33 0.0 1.2545489159599636E-4 0.0 0.04375239344410373 8.154567953739763E-4 34-35 0.0 1.8818233739399453E-4 0.0 0.08192204421218563 8.468205182729754E-4 36-37 0.0 2.0386419884349408E-4 0.0 0.13713787837587352 8.468205182729754E-4 38-39 0.0 2.509097831919927E-4 0.0 0.22261970513709556 8.93866102621474E-4 40-41 0.0 2.822735060909918E-4 0.0 0.32550839810726206 9.565935484194722E-4 42-43 0.0 3.136372289899909E-4 0.0 0.4345286989041829 9.722754098689718E-4 44-45 0.0 3.136372289899909E-4 0.0 0.5747872677085069 0.0010036391327679708 46-47 0.0 3.4500095188899E-4 0.0 0.7294417853234714 0.0010506847171164696 48-49 0.0 3.606828133384895E-4 0.0 0.8842217578300318 0.0010977303014649681 50-51 0.0 3.7636467478798907E-4 0.0 1.047564026688019 0.0010977303014649681 52-53 0.0 3.7636467478798907E-4 0.0 1.2219620078679037 0.0011447758858134666 54-55 0.0 3.7636467478798907E-4 0.0 1.4296055353207269 0.0011918214701619654 56-57 0.0 3.7636467478798907E-4 0.0 1.6665741436841146 0.0011918214701619654 58-59 0.0 3.7636467478798907E-4 0.0 1.9161666505143495 0.0011918214701619654 60-61 0.0 4.0772839768698815E-4 0.0 2.1821310206978612 0.0011918214701619654 62-63 0.0 4.0772839768698815E-4 0.0 2.459025648311675 0.0012545489159599636 64-65 0.0 4.0772839768698815E-4 0.0 2.769212867782776 0.0012545489159599636 66-67 0.0 4.3909212058598724E-4 0.0 3.132530233844782 0.0013015945003084623 68-69 0.0 4.3909212058598724E-4 0.0 3.521863808051507 0.0013643219461064605 70-71 0.0 4.7045584348498633E-4 0.0 3.9220805941041847 0.0013956856690054593 72-73 0.0 5.018195663839854E-4 0.0 4.341539024155399 0.0015054586991519563 74-75 0.0 5.018195663839854E-4 0.0 4.788989576893969 0.0015054586991519563 76-77 0.0 5.331832892829845E-4 0.0 5.299794849888517 0.0015211405606014557 78-79 0.0 5.331832892829845E-4 0.0 5.859260938960864 0.0015368224220509554 80-81 0.0 5.331832892829845E-4 0.0 6.426348412697666 0.0015995498678489535 82-83 0.0 5.331832892829845E-4 0.0 7.012363893204014 0.0017250047594449499 84-85 0.0 5.331832892829845E-4 0.0 7.630574235266185 0.0017250047594449499 86-87 0.0 5.331832892829845E-4 0.0 8.306086099064828 0.0017406866208944495 88-89 0.0 5.331832892829845E-4 0.0 9.040357897714745 0.0017720503437934484 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3035 0.0 52.069427 1 GTATCAA 5530 0.0 43.509098 1 TCAACGC 6800 0.0 34.759396 4 TATCAAC 6945 0.0 34.306503 2 ATCAACG 7025 0.0 33.91529 3 CAACGCA 6905 0.0 33.745438 5 AACGCAG 7450 0.0 31.202337 6 GTACATG 12210 0.0 30.3163 1 TACATGG 12755 0.0 28.5776 2 ACATGGG 13075 0.0 27.151764 3 ACGCAGA 8775 0.0 26.11694 7 CGCAGAG 9195 0.0 24.92478 8 CATGGGG 11055 0.0 24.600712 4 ATGGGGG 7565 0.0 24.151775 5 GTGGTAT 1600 0.0 21.652105 1 GCAGAGT 10095 0.0 21.245218 9 GAGTACA 9165 0.0 20.66035 1 GTATTAC 575 0.0 20.633335 1 AGTACAT 9470 0.0 18.89454 2 GTAAGTA 2080 0.0 18.482752 2 >>END_MODULE