##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921374_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2814984 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48137857977168 33.0 31.0 34.0 30.0 34.0 2 31.599954031710304 34.0 31.0 34.0 29.0 34.0 3 31.685650788778904 34.0 31.0 34.0 29.0 34.0 4 35.163696845168566 37.0 35.0 37.0 33.0 37.0 5 34.90469928070639 37.0 35.0 37.0 32.0 37.0 6 34.86186635519065 37.0 35.0 37.0 32.0 37.0 7 34.724893640603284 37.0 35.0 37.0 32.0 37.0 8 34.68953358171841 37.0 35.0 37.0 32.0 37.0 9 36.32989246120049 39.0 37.0 39.0 32.0 39.0 10-11 36.18023086454488 39.0 37.0 39.0 32.0 39.0 12-13 36.11196244809918 39.0 37.0 39.0 32.0 39.0 14-15 37.37741724286887 40.0 38.0 41.0 32.0 41.0 16-17 37.3511391183751 40.0 38.0 41.0 32.0 41.0 18-19 37.30420457096737 40.0 38.0 41.0 31.5 41.0 20-21 37.261324220670524 40.0 38.0 41.0 31.0 41.0 22-23 37.15387778403003 40.0 38.0 41.0 31.0 41.0 24-25 37.08795076632762 40.0 38.0 41.0 31.0 41.0 26-27 36.95167734523535 40.0 37.0 41.0 30.5 41.0 28-29 36.800545047502936 40.0 37.0 41.0 30.0 41.0 30-31 36.66773860881625 40.0 37.0 41.0 30.0 41.0 32-33 36.62635489224806 40.0 37.0 41.0 30.0 41.0 34-35 36.766601337698546 40.0 37.0 41.0 30.0 41.0 36-37 36.74873977969324 40.0 37.0 41.0 30.0 41.0 38-39 36.658536602694724 40.0 37.0 41.0 30.0 41.0 40-41 36.53830341486844 40.0 37.0 41.0 30.0 41.0 42-43 36.4403989507578 40.0 37.0 41.0 30.0 41.0 44-45 36.31123658251698 40.0 36.5 41.0 29.0 41.0 46-47 36.16476878731815 40.0 36.0 41.0 28.5 41.0 48-49 36.007409811210294 40.0 36.0 41.0 28.0 41.0 50-51 35.847363786081914 40.0 35.0 41.0 28.0 41.0 52-53 35.668637015343606 39.0 35.0 41.0 28.0 41.0 54-55 35.45175905085073 39.0 35.0 41.0 27.0 41.0 56-57 35.17787898616831 39.0 35.0 41.0 26.0 41.0 58-59 34.94491300838655 38.5 35.0 40.5 26.0 41.0 60-61 34.659497887021736 38.0 34.5 40.0 26.0 41.0 62-63 34.350797375757736 37.0 34.0 40.0 26.0 41.0 64-65 34.02782538017978 37.0 34.0 40.0 26.0 41.0 66-67 33.67871380441238 36.0 34.0 39.0 25.0 41.0 68-69 33.310433203172735 36.0 34.0 39.0 24.0 41.0 70-71 32.928476502885985 35.0 33.5 38.5 23.5 40.0 72-73 32.53154209757498 35.0 33.0 37.0 22.0 39.5 74-75 32.12979736296903 35.0 33.0 37.0 21.5 39.0 76-77 29.384658314221323 33.0 29.0 34.5 15.0 36.5 78-79 31.047717145106333 34.5 31.5 36.0 19.0 37.0 80-81 31.252163422598493 35.0 32.0 35.5 20.0 37.0 82-83 31.09965438524695 35.0 32.0 35.0 19.0 37.0 84-85 30.878101793829025 35.0 32.0 35.0 18.0 36.0 86-87 30.641936153100694 35.0 32.0 35.0 16.0 36.0 88-89 30.370523953244493 35.0 32.0 35.0 8.0 36.0 90-91 30.1983602748719 35.0 32.0 35.0 4.5 35.0 92-93 30.061746709750395 34.5 32.0 35.0 2.0 35.0 94-95 29.974147277568896 34.0 32.0 35.0 2.0 35.0 96-97 29.787911760777327 34.0 31.0 35.0 2.0 35.0 98-99 29.527973160771072 34.0 31.0 35.0 2.0 35.0 100-101 28.433494826258336 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 50809.0 3 17645.0 4 9852.0 5 6784.0 6 6040.0 7 5935.0 8 6061.0 9 6642.0 10 7436.0 11 7802.0 12 8485.0 13 9013.0 14 9738.0 15 10274.0 16 10865.0 17 11822.0 18 11321.0 19 10491.0 20 9951.0 21 9771.0 22 10508.0 23 11852.0 24 13894.0 25 16601.0 26 20002.0 27 23941.0 28 29126.0 29 35453.0 30 42638.0 31 53521.0 32 67861.0 33 90025.0 34 129593.0 35 196362.0 36 353575.0 37 691243.0 38 713230.0 39 88820.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.50038957074641 18.576796668262897 11.988995249015757 26.933818511974945 2 15.787974186654388 20.800269131765862 36.3842275143891 27.02752916719065 3 18.4016955890456 24.122887574502645 28.764939163353564 28.71047767309819 4 13.292535320797644 16.063844413347386 34.707086682987295 35.936533582867675 5 14.339110560898963 36.973131201434974 34.24499727815546 14.44276095951061 6 34.52805133739688 34.84702726091371 16.505822847045735 14.119098554643678 7 29.42930738835723 31.256849508505024 20.883039080520202 18.430804022617544 8 27.246225753863413 34.383056364041344 19.641675308080156 18.729042574015082 9 26.97866133519764 14.937385079275762 18.698010361692997 39.3859432238336 10-11 26.023209958199317 24.821178064509247 27.672034436224173 21.48357754106726 12-13 26.457276042654687 22.32994360879552 27.347247474047755 23.865532874502037 14-15 23.622484605261075 23.850739020296523 24.288578948406155 28.238197426036244 16-17 24.141520821832355 26.872625647518383 25.12255868429522 23.863294846354037 18-19 24.12583990577531 26.310318729465838 26.233017824146483 23.33082354061237 20-21 24.433651324600476 25.59327621474109 26.26523910447104 23.7078333561874 22-23 24.288253762551605 25.46559866542474 26.012636688457246 24.23351088356641 24-25 24.124693177460347 25.69936178069775 25.981889854549372 24.194055187292523 26-27 24.01498521976037 25.84463714076522 26.02419902327146 24.11617861620295 28-29 24.15072722234459 25.93913642790658 25.863323409667405 24.046812940081427 30-31 24.335016639128714 25.693397695338998 25.749657899939976 24.221927765592312 32-33 24.035276054274842 25.8470251817265 25.727505555406534 24.390193208592127 34-35 24.343452879086826 25.80580981383776 25.84002343437602 24.010713872699398 36-37 24.359596719603392 25.69066146304865 25.89117908946987 24.058562727878098 38-39 24.230522542179276 25.8250285037701 25.870250874029765 24.07419808002086 40-41 24.33642906219381 25.62857790443953 25.926462762083606 24.108530271283048 42-43 24.197993905617 25.59738560419622 25.793657137842697 24.410963352344083 44-45 24.083927924644065 25.713789349208287 25.90471226825416 24.297570457893485 46-47 24.257629320122447 25.729607554775303 25.74287694162482 24.26988618347743 48-49 24.05769147757138 25.800987779677133 25.788499754769294 24.352820987982184 50-51 24.07886974888657 25.813300099987796 25.91106752471319 24.196762626412447 52-53 24.33150031714691 25.564865202349672 25.811175827277406 24.29245865322601 54-55 23.800522566080097 25.586412571426543 26.05233476201218 24.56073010048118 56-57 23.879039426350126 25.761807690586036 25.859291790801393 24.49986109226245 58-59 23.964008325557213 25.644183505456077 25.880851165121477 24.510957003865233 60-61 23.940738745962573 25.708067465160838 25.982638285052367 24.368555503824222 62-63 23.902151310337107 25.677863950206927 25.969342117769116 24.45064262168685 64-65 23.7591768867011 25.51628483165772 25.920105159952083 24.804433121689097 66-67 23.703546680493133 25.737910045285467 25.79011466893064 24.768428605290755 68-69 23.79102144547433 25.576281717236988 25.84662656148755 24.786070275801134 70-71 23.66695293551736 25.379892625191978 25.89023659738463 25.062917841906028 72-73 23.686280376382246 25.557993378967158 25.76478294912593 24.990943295524666 74-75 23.527105208407917 25.657085059013507 25.794387342747754 25.021422389830818 76-77 23.62971059378065 25.336731374616782 25.90268186859273 25.130876163009834 78-79 23.537085064038383 25.335602290689486 25.890873555099386 25.236439090172745 80-81 23.566170479080874 25.481758224025324 25.753900459529927 25.19817083736387 82-83 23.49069038253438 25.419449330570608 25.86494796623548 25.224912320659527 84-85 23.43381283063201 25.43822039865694 25.80875746062533 25.319209310085718 86-87 23.309582129196524 25.54430361295261 25.765123505017158 25.38099075283371 88-89 23.208201155636164 25.318116958472753 25.800866833982912 25.672815051908167 90-91 23.196912908627812 25.23644809154075 25.890081528663327 25.676557471168103 92-93 23.183039881031505 25.098559881258982 25.984301504379925 25.734098733329592 94-95 23.062002250557978 24.971335138634903 26.05943640130984 25.907226209497285 96-97 22.964546702208427 24.868858929689914 26.083332711601205 26.083261656500454 98-99 22.84141814241816 24.86930496101174 25.997264605055154 26.29201229151495 100-101 22.75087972583425 24.867479389876763 26.0535972442747 26.328043640014286 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 95.0 1 71.5 2 85.5 3 122.5 4 101.5 5 114.5 6 198.0 7 331.0 8 461.5 9 513.5 10 453.0 11 378.0 12 377.5 13 401.5 14 423.0 15 444.5 16 482.0 17 553.0 18 624.0 19 668.5 20 742.0 21 851.5 22 977.5 23 1162.0 24 1411.0 25 1772.0 26 2326.5 27 3170.5 28 4459.0 29 6444.0 30 9429.0 31 13743.5 32 19941.0 33 25016.0 34 29106.0 35 34962.0 36 42934.0 37 50958.0 38 58194.0 39 65634.5 40 72534.0 41 79216.5 42 85383.0 43 92266.0 44 99412.0 45 106822.0 46 112974.0 47 117221.0 48 121893.5 49 125031.0 50 125504.0 51 125854.5 52 126251.5 53 125687.5 54 123957.0 55 118999.5 56 110837.5 57 100918.5 58 91087.0 59 79533.0 60 66180.5 61 54333.5 62 44055.5 63 33794.5 64 24167.0 65 17486.0 66 13245.5 67 10277.5 68 7863.0 69 5934.5 70 4461.5 71 3289.0 72 2379.5 73 1787.0 74 1404.5 75 1060.0 76 731.5 77 420.5 78 242.0 79 147.0 80 86.5 81 51.0 82 29.0 83 19.5 84 17.0 85 15.0 86 11.5 87 7.0 88 5.0 89 5.0 90 3.5 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 0.5 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14913051015565276 2 2.1314508359550176E-4 3 0.0053641512704867955 4 0.005008909464494292 5 0.025435313309063214 6 0.0013499188627715112 7 3.55241805992503E-5 8 0.0018117332105617651 9 0.0 10-11 0.1004979069152791 12-13 2.1314508359550176E-4 14-15 0.005062195735393168 16-17 2.1314508359550176E-4 18-19 3.7300389629212814E-4 20-21 7.815319731835066E-4 22-23 2.1314508359550176E-4 24-25 0.0015097776754681375 26-27 0.002735361906142273 28-29 0.005825965618277048 30-31 0.013623523259812488 32-33 0.013623523259812488 34-35 0.011207878979063468 36-37 6.927215216853808E-4 38-39 1.9538299329587664E-4 40-41 0.004902336922696541 42-43 0.009271811136404327 44-45 0.008365944531123446 46-47 0.008330420350524195 48-49 0.01021320192228446 50-51 0.004991147374194667 52-53 0.0015097776754681375 54-55 0.0010302012373782587 56-57 0.00589701397947555 58-59 0.009857960116291958 60-61 0.008081751086329442 62-63 0.019058722891497785 64-65 0.03499131789026154 66-67 0.037549058893407566 68-69 0.028437106569699864 70-71 0.04246915790640373 72-73 0.027371381151722357 74-75 0.0268385184427336 76-77 0.23799424792467738 78-79 0.0690767691752422 80-81 0.05561310472812634 82-83 0.02165198807524306 84-85 0.034120975465579906 86-87 0.08115499057898731 88-89 0.2673549831899577 90-91 0.3189005692394699 92-93 0.05207844875850094 94-95 0.004493808845805163 96-97 0.00948495621999983 98-99 0.00120782214037451 100-101 0.0015808260366666383 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2814984.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.88363434790528 #Duplication Level Percentage of deduplicated Percentage of total 1 77.6532389339977 45.72504927320043 2 12.225871399934034 14.39807482196457 3 4.069680265940524 7.1891269407758305 4 1.87192099729333 4.409020461311465 5 1.0550766043996362 3.106337249124885 6 0.6732807643825401 2.3787131006027797 7 0.4551869653168268 1.876214397795407 8 0.3340275722963261 1.5735005943372293 9 0.25382013607767706 1.3451266874640146 >10 1.3354946272599788 13.657952304150253 >50 0.05607946998997357 2.2050828766904966 >100 0.01505013968745949 1.4601735628250463 >500 7.875049767400394E-4 0.3467848998881264 >1k 4.84618447209116E-4 0.3288428298694672 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 3.55241805992503E-5 0.0 0.0 0.0 8 0.0 3.55241805992503E-5 0.0 0.0 0.0 9 0.0 3.55241805992503E-5 0.0 0.0 3.55241805992503E-5 10-11 0.0 3.55241805992503E-5 0.0 0.0 3.55241805992503E-5 12-13 0.0 7.10483611985006E-5 0.0 1.776209029962515E-5 3.55241805992503E-5 14-15 0.0 1.0657254179775089E-4 0.0 3.55241805992503E-5 3.55241805992503E-5 16-17 0.0 1.0657254179775089E-4 0.0 3.55241805992503E-5 3.55241805992503E-5 18-19 0.0 1.0657254179775089E-4 0.0 3.55241805992503E-5 3.55241805992503E-5 20-21 0.0 1.0657254179775089E-4 0.0 8.881045149812574E-5 3.55241805992503E-5 22-23 0.0 1.0657254179775089E-4 0.0 2.6643135449437724E-4 7.10483611985006E-5 24-25 0.0 1.2433463209737605E-4 0.0 5.328627089887545E-4 1.0657254179775089E-4 26-27 0.0 1.420967223970012E-4 0.0 0.0014920155851685124 1.2433463209737605E-4 28-29 0.0 1.420967223970012E-4 0.0 0.006927215216853808 1.420967223970012E-4 30-31 0.0 1.776209029962515E-4 0.0 0.02859696538239649 1.420967223970012E-4 32-33 1.776209029962515E-5 1.776209029962515E-4 0.0 0.07117269583059797 1.420967223970012E-4 34-35 3.55241805992503E-5 1.776209029962515E-4 0.0 0.12637727248183295 1.420967223970012E-4 36-37 3.55241805992503E-5 1.776209029962515E-4 0.0 0.20314502675681284 1.420967223970012E-4 38-39 3.55241805992503E-5 1.776209029962515E-4 0.0 0.3112451083203315 1.420967223970012E-4 40-41 3.55241805992503E-5 1.776209029962515E-4 0.0 0.43362591048474874 1.420967223970012E-4 42-43 3.55241805992503E-5 1.776209029962515E-4 0.0 0.565349572146769 1.5985881269662633E-4 44-45 3.55241805992503E-5 1.776209029962515E-4 0.0 0.734551244340998 1.776209029962515E-4 46-47 3.55241805992503E-5 1.776209029962515E-4 0.0 0.9246233726372868 1.776209029962515E-4 48-49 3.55241805992503E-5 1.776209029962515E-4 0.0 1.110450361351965 1.776209029962515E-4 50-51 3.55241805992503E-5 1.776209029962515E-4 0.0 1.3041814802499765 1.776209029962515E-4 52-53 3.55241805992503E-5 1.776209029962515E-4 0.0 1.5066515475754036 1.9538299329587664E-4 54-55 3.55241805992503E-5 2.3090717389512695E-4 0.0 1.743047207373115 2.1314508359550178E-4 56-57 3.55241805992503E-5 2.841934447940024E-4 0.0 2.013421745914009 2.3090717389512695E-4 58-59 3.55241805992503E-5 2.841934447940024E-4 0.0 2.29480878044067 2.486692641947521E-4 60-61 3.55241805992503E-5 2.841934447940024E-4 0.0 2.5834249857192795 2.486692641947521E-4 62-63 3.55241805992503E-5 2.841934447940024E-4 0.0 2.8878494513645547 2.841934447940024E-4 64-65 3.55241805992503E-5 3.019555350936275E-4 0.0 3.216057355921028 2.841934447940024E-4 66-67 3.55241805992503E-5 3.1971762539325266E-4 0.0 3.59883040187795 2.841934447940024E-4 68-69 3.55241805992503E-5 3.1971762539325266E-4 0.0 4.000004973385284 2.841934447940024E-4 70-71 3.55241805992503E-5 3.374797156928778E-4 0.0 4.420504699138609 3.1971762539325266E-4 72-73 3.55241805992503E-5 3.7300389629212814E-4 0.0 4.858624418469164 3.374797156928778E-4 74-75 3.55241805992503E-5 3.907659865917533E-4 0.0 5.326673259954585 3.55241805992503E-4 76-77 3.55241805992503E-5 4.2629016719100357E-4 0.0 5.849678008827048 3.55241805992503E-4 78-79 3.55241805992503E-5 4.2629016719100357E-4 0.0 6.425471690069997 3.55241805992503E-4 80-81 3.55241805992503E-5 4.2629016719100357E-4 0.0 7.012935064639799 3.7300389629212814E-4 82-83 3.55241805992503E-5 4.2629016719100357E-4 0.0 7.616881659007653 4.2629016719100357E-4 84-85 3.55241805992503E-5 4.2629016719100357E-4 0.0 8.245162317085995 4.440522574906287E-4 86-87 5.3286270898875446E-5 4.2629016719100357E-4 0.0 8.932235494056094 4.973385283895042E-4 88-89 7.10483611985006E-5 4.2629016719100357E-4 0.0 9.665774299250014 4.973385283895042E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2175 0.0 45.67101 1 GTATCAA 3535 0.0 40.066414 1 TCAACGC 4200 0.0 31.980164 4 CAACGCA 4440 0.0 30.626066 5 GTACATG 6845 0.0 29.440556 1 TATCAAC 4615 0.0 29.4129 2 ATCAACG 4575 0.0 29.358837 3 AACGCAG 4725 0.0 28.576002 6 TACATGG 7220 0.0 26.491795 2 ACATGGG 7395 0.0 25.800697 3 ACGCAGA 5890 0.0 22.601002 7 CATGGGG 6615 0.0 22.24208 4 CGCAGAG 6150 0.0 21.336292 8 ATGGGGG 3870 0.0 19.779854 5 AGAGTAC 5695 0.0 17.531155 10-11 GTATAGA 625 0.0 17.490467 1 GCAGAGT 7140 0.0 17.046167 9 GAGTACA 5295 0.0 16.875065 1 TAAGGTG 1150 0.0 16.537518 5 ACCGTCG 230 4.2415857E-5 16.536634 8 >>END_MODULE