##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921373_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2428747 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.348976241658765 33.0 31.0 34.0 28.0 34.0 2 31.469650811714846 34.0 31.0 34.0 28.0 34.0 3 31.54963485286858 34.0 31.0 34.0 28.0 34.0 4 35.04051924716737 37.0 35.0 37.0 32.0 37.0 5 34.7726234968072 37.0 35.0 37.0 32.0 37.0 6 34.72713337371081 37.0 35.0 37.0 32.0 37.0 7 34.588022959987185 37.0 35.0 37.0 32.0 37.0 8 34.55385637120705 37.0 35.0 37.0 32.0 37.0 9 36.17631107727565 39.0 37.0 39.0 32.0 39.0 10-11 36.02150676871655 39.0 37.0 39.0 31.0 39.0 12-13 35.95776217119362 39.0 37.0 39.0 31.0 39.0 14-15 37.19411861342495 40.0 38.0 41.0 31.0 41.0 16-17 37.167246732574455 40.0 38.0 41.0 31.0 41.0 18-19 37.13185708515543 40.0 38.0 41.0 31.0 41.0 20-21 37.09417675039846 40.0 38.0 41.0 31.0 41.0 22-23 36.979754169536804 40.0 37.5 41.0 30.5 41.0 24-25 36.914920121363 40.0 37.0 41.0 30.0 41.0 26-27 36.77643101566363 40.0 37.0 41.0 30.0 41.0 28-29 36.62142845673098 40.0 37.0 41.0 30.0 41.0 30-31 36.48462767015255 40.0 37.0 41.0 30.0 41.0 32-33 36.43230377639169 40.0 36.5 41.0 30.0 41.0 34-35 36.5587304894252 40.0 37.0 41.0 30.0 41.0 36-37 36.53151480989992 40.0 37.0 41.0 30.0 41.0 38-39 36.440862716454205 40.0 37.0 41.0 30.0 41.0 40-41 36.31942787783166 40.0 37.0 41.0 29.0 41.0 42-43 36.214646688189426 40.0 36.0 41.0 29.0 41.0 44-45 36.0828655681304 40.0 36.0 41.0 28.0 41.0 46-47 35.93665210909164 40.0 36.0 41.0 28.0 41.0 48-49 35.78239726080979 40.0 35.5 41.0 27.0 41.0 50-51 35.629289506070414 40.0 35.0 41.0 27.0 41.0 52-53 35.45942908009768 39.0 35.0 41.0 26.5 41.0 54-55 35.255534643995446 39.0 35.0 41.0 26.0 41.0 56-57 34.993297778648824 39.0 35.0 41.0 26.0 41.0 58-59 34.77713302373611 38.5 35.0 40.5 25.5 41.0 60-61 34.5068026846765 38.0 34.5 40.0 24.5 41.0 62-63 34.21124616932105 37.5 34.0 40.0 24.0 41.0 64-65 33.89747676476801 37.0 34.0 40.0 23.0 41.0 66-67 33.56225741092011 36.5 34.0 39.5 22.5 41.0 68-69 33.19710142719683 36.0 34.0 39.0 22.0 41.0 70-71 32.8124996139985 35.5 33.0 39.0 21.5 40.0 72-73 32.40942181297599 35.0 33.0 37.5 20.0 40.0 74-75 31.99238146254015 35.0 33.0 37.0 18.5 39.0 76-77 29.214112873839888 33.0 28.5 34.5 11.0 36.5 78-79 30.86785470038666 34.5 31.5 36.0 12.5 38.0 80-81 31.05200212290535 35.0 32.0 36.0 14.0 37.0 82-83 30.87742156758197 35.0 32.0 35.0 11.0 37.0 84-85 30.63239645792666 35.0 32.0 35.0 7.5 36.5 86-87 30.376088987449084 35.0 32.0 35.0 4.0 36.0 88-89 30.083317241359435 35.0 31.0 35.0 2.0 36.0 90-91 29.889920399284073 34.5 31.0 35.0 2.0 35.0 92-93 29.738129990484808 34.0 31.0 35.0 2.0 35.0 94-95 29.628763308817263 34.0 31.0 35.0 2.0 35.0 96-97 29.428681744125676 34.0 31.0 35.0 2.0 35.0 98-99 29.150860505437578 34.0 31.0 35.0 2.0 35.0 100-101 28.053327703544255 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48468.0 3 15858.0 4 8620.0 5 5919.0 6 5347.0 7 5398.0 8 5639.0 9 6104.0 10 6657.0 11 7337.0 12 7801.0 13 8563.0 14 9096.0 15 9939.0 16 10659.0 17 11645.0 18 10846.0 19 9801.0 20 9493.0 21 9077.0 22 9977.0 23 10932.0 24 12684.0 25 15224.0 26 18203.0 27 21820.0 28 25892.0 29 31448.0 30 38070.0 31 46951.0 32 59928.0 33 78361.0 34 111436.0 35 167030.0 36 289330.0 37 568708.0 38 625121.0 39 85363.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.56643124796653 19.534020249554544 12.224576821587759 26.67497168089117 2 15.490039053252003 21.517497792060475 36.86532289442858 26.12714026025894 3 17.91688901625952 24.842914130234277 29.443697789021527 27.796499064484674 4 12.98454192768445 16.73323357904073 35.69109219421288 34.59113229906195 5 13.75032227189122 37.52159118708903 34.800380878012774 13.927705663006975 6 33.361029780817894 35.80878910664958 16.98468858583833 13.8454925266942 7 28.351197161989898 31.938977512656745 21.570902491164155 18.138922834189195 8 26.40219672442991 34.89741660891989 20.222118188814047 18.47826847783615 9 26.5934656841573 15.059946548570105 19.45859325816975 38.88799450910284 10-11 25.34429238273389 25.311793597059157 28.402764024812832 20.941149995394113 12-13 25.919421264296233 22.93061121135732 27.87133671025232 23.278630814094125 14-15 23.10519981207334 24.561281425936762 25.021771739931577 27.311747022058324 16-17 23.362598152705456 27.425526229433274 25.932427541676944 23.279448076184327 18-19 23.286094789184666 26.927287721972366 27.13457653092945 22.652040957913517 20-21 23.731855191509947 26.269750589300973 27.048739564998098 22.949654654190983 22-23 23.597802318155786 26.143256938471417 26.670320137058667 23.588620606314137 24-25 23.35910773720031 26.28678328728335 26.76354010569022 23.59056886982612 26-27 23.311217130902417 26.479492828841263 26.793407301970156 23.41588273828616 28-29 23.369878513970235 26.647888982587443 26.597221764709754 23.385010738732568 30-31 23.69021950399937 26.385736358005985 26.500606988021662 23.423437149972987 32-33 23.416794066021176 26.432395982931062 26.475922808859785 23.674887142187977 34-35 23.65585221101829 26.4626075140135 26.597590038964984 23.283950236003232 36-37 23.66044132548341 26.32934757233104 26.60467676714858 23.40553433503697 38-39 23.554762553245105 26.399750982452048 26.61998822848595 23.4254982358169 40-41 23.66887160894906 26.204596409094 26.680419247849102 23.446112734107842 42-43 23.440592163615833 26.24092141791825 26.485494445583686 23.83299197288223 44-45 23.38820373800643 26.326491157960923 26.601203480032552 23.684101624000096 46-47 23.531968389029714 26.29527235473069 26.41699237890999 23.755766877329602 48-49 23.31478458310402 26.36366462690123 26.51810371611209 23.803447073882662 50-51 23.40539116076925 26.357373883361024 26.518392245754253 23.718842710115478 52-53 23.558248157871333 26.259062416622474 26.463924088158663 23.718765337347534 54-55 23.106473281009517 26.171439135479485 26.69819765292199 24.02388993058901 56-57 23.187437862850587 26.325728058496267 26.500149571800534 23.98668450685261 58-59 23.200218076149177 26.19355617097648 26.554950680654123 24.051275072220225 60-61 23.307894976859654 26.193834552750705 26.60743517583843 23.890835294551216 62-63 23.224748356091187 26.154185108198902 26.619287500527637 24.001779035182274 64-65 23.007333266471942 26.008064142450177 26.56006188042095 24.42454071065693 66-67 23.0201586097306 26.218693442664815 26.360856495840345 24.40029145176424 68-69 23.042345229919555 26.14873289670532 26.381015432991738 24.42790644038339 70-71 22.96863875261021 25.91357630835941 26.435855289240894 24.681929649789485 72-73 23.000092252746164 26.082569502560016 26.277721126537823 24.639617118156 74-75 22.923051483995767 26.186332779201717 26.188186062199886 24.70242967460263 76-77 22.89168262762871 25.980023018455416 26.30348659227596 24.82480776163991 78-79 22.843479538145324 25.98232291550141 26.297871831969843 24.876325714383423 80-81 22.91090780409472 26.106051780121923 26.116103612974772 24.86693680280858 82-83 22.88788939975262 26.083392481098965 26.1811999264488 24.84751819269961 84-85 22.899284869068396 25.97398131013568 26.12499366748945 25.00174015330648 86-87 22.761688052405397 26.11599848852777 26.07594529855079 25.046368160516042 88-89 22.689184907521987 25.90358672890695 26.119989720651482 25.287238642919586 90-91 22.652357256654458 25.798161151042287 26.197422439178332 25.352059153124923 92-93 22.677557810022506 25.71661853026826 26.24080475324792 25.365018906461316 94-95 22.60867434835743 25.607790723337253 26.25134231946215 25.532192608843168 96-97 22.553864436706714 25.512125983733196 26.24782582198753 25.68618375757256 98-99 22.3755747632238 25.533681871193338 26.149994801783244 25.94074856379962 100-101 22.32327975675921 25.560067105734763 26.126871342314388 25.989781795191636 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 162.0 1 135.5 2 132.0 3 157.5 4 141.0 5 146.0 6 230.0 7 401.5 8 551.5 9 592.0 10 504.0 11 409.0 12 407.0 13 432.5 14 462.5 15 510.0 16 553.5 17 575.0 18 649.5 19 732.5 20 823.0 21 936.5 22 1116.0 23 1372.5 24 1666.0 25 2155.5 26 2958.0 27 4179.0 28 5882.0 29 8572.0 30 12433.5 31 17142.0 32 23351.5 33 28894.5 34 33550.0 35 39027.0 36 46107.0 37 53367.5 38 59372.5 39 65241.0 40 70548.5 41 75687.5 42 80634.0 43 86080.5 44 91468.5 45 96488.0 46 100259.0 47 102889.0 48 106316.5 49 108358.0 50 107154.5 51 105059.0 52 103166.5 53 100538.5 54 96895.0 55 91005.0 56 83480.5 57 74660.0 58 66240.0 59 57732.5 60 47706.5 61 38909.0 62 31485.0 63 23918.5 64 17039.0 65 12294.0 66 9212.0 67 7039.0 68 5350.5 69 4085.5 70 3146.0 71 2324.0 72 1650.5 73 1215.5 74 911.5 75 657.5 76 476.5 77 295.0 78 162.5 79 96.5 80 60.0 81 36.0 82 20.0 83 11.0 84 6.0 85 6.5 86 6.5 87 3.5 88 1.5 89 1.5 90 2.5 91 2.0 92 1.5 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15258896871514407 2 4.940819278418049E-4 3 0.0057231156641675725 4 0.004652604820510329 5 0.027709761453127892 6 0.0014822457835254146 7 1.235204819604512E-4 8 0.0016469397594726827 9 0.0 10-11 0.10303666870200973 12-13 1.8528072294067682E-4 14-15 0.00576428915815439 16-17 2.470409639209024E-4 18-19 4.117349398681707E-4 20-21 9.058168677099755E-4 22-23 2.470409639209024E-4 24-25 0.0018733939764001767 26-27 0.002470409639209024 28-29 0.006381891567956647 30-31 0.014945978317214595 32-33 0.014801871088260737 34-35 0.011713859039249456 36-37 7.411228917627073E-4 38-39 1.0293373496704267E-4 40-41 0.004611431326523512 42-43 0.00942873012298111 44-45 0.008502326508277725 46-47 0.009181689159060206 48-49 0.011590338557289005 50-51 0.005846636146128023 52-53 0.0014410722895385976 54-55 0.0010293373496704267 56-57 0.006073090363055518 58-59 0.009778704821869055 60-61 0.008090591568409555 62-63 0.019125087956876532 64-65 0.03452397470794611 66-67 0.03709731808212218 68-69 0.02756565422417403 70-71 0.04205872410753364 72-73 0.02614516868162884 74-75 0.025671673500780444 76-77 0.24327358922110867 78-79 0.07026256748850333 80-81 0.05471957350847989 82-83 0.020854374704322845 84-85 0.032938795189453654 86-87 0.08127647712997689 88-89 0.26410737717843813 90-91 0.3201650892414895 92-93 0.05229033736325768 94-95 0.004734951808483963 96-97 0.010005159038796547 98-99 0.0012146180726111035 100-101 0.0017498734944397256 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2428747.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.90252077426622 #Duplication Level Percentage of deduplicated Percentage of total 1 81.25796725814534 53.551048753045684 2 11.172343307773067 14.725711738754976 3 3.2165743777793554 6.359410792607294 4 1.3821794651026291 3.643564436507608 5 0.7845821030199256 2.5852969171694062 6 0.4941051591317815 1.953766530861261 7 0.3188968898513971 1.4711276235796407 8 0.24052691528912706 1.2681064025289495 9 0.1822042541956244 1.080694768255814 >10 0.9048747039521599 10.319680340974129 >50 0.035316014836950994 1.5606598428377072 >100 0.009552467017178459 1.0429162489443182 >500 7.517862046359715E-4 0.33161856261690176 >1k 1.2529770077081317E-4 0.10639704131649012 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.117349398681707E-5 2 0.0 0.0 0.0 0.0 4.117349398681707E-5 3 0.0 0.0 0.0 0.0 4.117349398681707E-5 4 0.0 0.0 0.0 4.117349398681707E-5 4.117349398681707E-5 5 0.0 0.0 0.0 4.117349398681707E-5 4.117349398681707E-5 6 0.0 0.0 0.0 4.117349398681707E-5 4.117349398681707E-5 7 0.0 0.0 0.0 4.117349398681707E-5 4.117349398681707E-5 8 0.0 0.0 0.0 4.117349398681707E-5 4.117349398681707E-5 9 0.0 0.0 0.0 1.235204819604512E-4 8.234698797363414E-5 10-11 0.0 0.0 0.0 1.235204819604512E-4 8.234698797363414E-5 12-13 0.0 0.0 0.0 1.235204819604512E-4 8.234698797363414E-5 14-15 0.0 0.0 0.0 1.646939759472683E-4 1.646939759472683E-4 16-17 0.0 0.0 0.0 2.2645421692749388E-4 2.0586746993408536E-4 18-19 0.0 0.0 0.0 2.470409639209024E-4 2.0586746993408536E-4 20-21 0.0 0.0 0.0 2.882144579077195E-4 2.0586746993408536E-4 22-23 0.0 0.0 0.0 4.5290843385498776E-4 2.0586746993408536E-4 24-25 0.0 0.0 0.0 0.0013587253015649634 2.2645421692749388E-4 26-27 0.0 0.0 0.0 0.0026351036151562924 2.470409639209024E-4 28-29 0.0 0.0 0.0 0.009099342171086572 2.470409639209024E-4 30-31 0.0 0.0 0.0 0.03621208796140561 3.08801204901128E-4 32-33 0.0 0.0 0.0 0.08893474701152487 3.2938795189453655E-4 34-35 0.0 0.0 0.0 0.1581885638973512 3.2938795189453655E-4 36-37 0.0 0.0 0.0 0.2577872458514617 3.2938795189453655E-4 38-39 0.0 0.0 0.0 0.40216210251623574 3.2938795189453655E-4 40-41 0.0 0.0 0.0 0.5638915868964531 3.2938795189453655E-4 42-43 0.0 0.0 0.0 0.7372937568219333 3.2938795189453655E-4 44-45 0.0 0.0 0.0 0.9520135279631843 3.2938795189453655E-4 46-47 0.0 0.0 0.0 1.1926931870631234 3.2938795189453655E-4 48-49 0.0 0.0 0.0 1.4319935341145043 3.7056144588135364E-4 50-51 0.0 0.0 0.0 1.678437482372598 4.1173493986817073E-4 52-53 0.0 0.0 0.0 1.9401362101528072 4.1173493986817073E-4 54-55 0.0 4.117349398681707E-5 0.0 2.244614198185319 4.1173493986817073E-4 56-57 0.0 4.117349398681707E-5 0.0 2.592139074181049 4.1173493986817073E-4 58-59 0.0 4.117349398681707E-5 0.0 2.952942401987527 4.1173493986817073E-4 60-61 0.0 4.117349398681707E-5 0.0 3.329453417749976 4.1173493986817073E-4 62-63 0.0 4.117349398681707E-5 0.0 3.712490432309335 4.5290843385498776E-4 64-65 0.0 4.117349398681707E-5 0.0 4.132501244468855 4.734951808483963E-4 66-67 0.0 4.117349398681707E-5 0.0 4.6151987012233056 4.940819278418049E-4 68-69 0.0 4.117349398681707E-5 0.0 5.130958473649169 4.940819278418049E-4 70-71 0.0 4.117349398681707E-5 0.0 5.674510354516135 5.352554218286219E-4 72-73 0.0 4.117349398681707E-5 0.0 6.229508466711436 5.76428915815439E-4 74-75 0.0 4.117349398681707E-5 0.0 6.8162101692765855 5.970156628088475E-4 76-77 0.0 4.117349398681707E-5 0.0 7.482088500778385 6.17602409802256E-4 78-79 0.0 4.117349398681707E-5 0.0 8.1941429057864 6.17602409802256E-4 80-81 0.0 4.117349398681707E-5 0.0 8.927401660197624 6.381891567956645E-4 82-83 0.0 4.117349398681707E-5 0.0 9.681700070036113 6.999493977758902E-4 84-85 0.0 4.117349398681707E-5 0.0 10.463502373857796 6.999493977758902E-4 86-87 0.0 4.117349398681707E-5 0.0 11.310626425889563 6.999493977758902E-4 88-89 0.0 4.117349398681707E-5 0.0 12.218501968298881 6.999493977758902E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1830 0.0 47.26945 1 GTATCAA 3070 0.0 39.01417 1 TCAACGC 3715 0.0 31.045532 4 GTACATG 5600 0.0 30.89396 1 CAACGCA 3865 0.0 30.137154 5 ATCAACG 4020 0.0 28.926218 3 AACGCAG 4105 0.0 28.603859 6 TACATGG 6055 0.0 27.983736 2 TATCAAC 4180 0.0 27.93254 2 ACATGGG 6300 0.0 26.29278 3 CATGGGG 4685 0.0 25.428207 4 ACGCAGA 4985 0.0 23.07667 7 CGCAGAG 5250 0.0 21.821302 8 ATGGGGG 2695 0.0 20.640144 5 GAGTACA 4200 0.0 18.445845 1 AGAGTAC 5100 0.0 17.429878 10-11 GCAGAGT 6130 0.0 17.292881 9 GTACCGT 280 7.08078E-7 16.977856 6 GTGTAGC 1445 0.0 16.117157 1 AGTACAT 4550 0.0 15.855641 2 >>END_MODULE