##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921372_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2538435 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.473061551704102 31.0 31.0 34.0 26.0 34.0 2 30.52954123308259 33.0 31.0 34.0 26.0 34.0 3 30.575432106790206 33.0 31.0 34.0 26.0 34.0 4 34.03444957227583 37.0 35.0 37.0 30.0 37.0 5 34.02944530783731 37.0 35.0 37.0 30.0 37.0 6 34.07694150135812 37.0 35.0 37.0 30.0 37.0 7 33.99143842564415 37.0 35.0 37.0 30.0 37.0 8 33.95966412376129 37.0 35.0 37.0 30.0 37.0 9 35.52980990255807 39.0 37.0 39.0 30.0 39.0 10-11 35.43022098261331 39.0 37.0 39.0 30.0 39.0 12-13 35.31843005631423 39.0 35.0 39.0 29.0 39.0 14-15 36.466890820525244 40.0 37.0 41.0 29.0 41.0 16-17 36.41352762627367 40.0 37.0 41.0 29.0 41.0 18-19 36.36498433089679 40.0 37.0 41.0 28.5 41.0 20-21 36.2974175033042 40.0 37.0 41.0 28.0 41.0 22-23 36.18316659674169 40.0 36.5 41.0 27.0 41.0 24-25 36.08620784065773 40.0 36.0 41.0 27.0 41.0 26-27 35.941674890237486 40.0 36.0 41.0 27.0 41.0 28-29 35.798816987632144 40.0 36.0 41.0 27.0 41.0 30-31 35.64909737692712 40.0 36.0 41.0 26.5 41.0 32-33 35.46510468063984 39.5 35.0 41.0 25.0 41.0 34-35 35.29723491048618 39.0 35.0 41.0 25.0 41.0 36-37 35.12342801765655 39.0 35.0 41.0 24.5 41.0 38-39 35.35400315548753 39.5 35.0 41.0 25.0 41.0 40-41 35.46685182011751 40.0 35.0 41.0 25.0 41.0 42-43 35.28852304668034 40.0 35.0 41.0 24.0 41.0 44-45 35.161844798074405 40.0 35.0 41.0 24.0 41.0 46-47 35.00326342805705 40.0 35.0 41.0 23.0 41.0 48-49 34.84983346038011 39.5 35.0 41.0 22.5 41.0 50-51 33.10962758550052 37.0 32.5 39.5 18.5 40.0 52-53 33.26202739089242 37.5 33.5 39.5 18.5 40.0 54-55 34.124766637711815 39.0 34.0 40.5 19.5 41.0 56-57 34.131645876297796 39.0 34.0 41.0 19.0 41.0 58-59 33.946536350152755 38.0 34.0 41.0 18.0 41.0 60-61 33.69711574257367 38.0 34.0 40.0 17.0 41.0 62-63 33.40268196743269 37.0 34.0 40.0 13.5 41.0 64-65 33.10444013732871 37.0 33.0 40.0 12.5 41.0 66-67 32.76076696862437 36.0 33.0 39.0 8.0 41.0 68-69 32.393214322998226 36.0 33.0 39.0 7.0 41.0 70-71 32.011107434304996 35.0 32.5 39.0 3.5 40.5 72-73 31.65341401296468 35.0 32.0 37.5 2.0 40.0 74-75 31.2556265967023 35.0 32.0 37.0 2.0 39.0 76-77 30.878779641787162 35.0 32.0 36.5 2.0 39.0 78-79 30.528406084851493 35.0 31.5 36.0 2.0 38.5 80-81 30.17345726796235 35.0 31.0 36.0 2.0 37.0 82-83 29.87008688424167 35.0 31.0 35.0 2.0 37.0 84-85 29.628411994004182 35.0 31.0 35.0 2.0 36.5 86-87 29.394276394707763 35.0 31.0 35.0 2.0 36.0 88-89 29.17517545259185 35.0 31.0 35.0 2.0 36.0 90-91 28.905747241902986 35.0 30.0 35.0 2.0 35.5 92-93 28.69927258330428 34.0 30.0 35.0 2.0 35.0 94-95 28.472737730136874 34.0 30.0 35.0 2.0 35.0 96-97 28.20170912392872 34.0 29.5 35.0 2.0 35.0 98-99 27.950362920460833 34.0 29.0 35.0 2.0 35.0 100-101 26.885126071772568 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 84804.0 3 14465.0 4 10001.0 5 7731.0 6 7140.0 7 7264.0 8 7631.0 9 8254.0 10 8858.0 11 9524.0 12 9523.0 13 9778.0 14 10657.0 15 11579.0 16 11908.0 17 12659.0 18 11717.0 19 10697.0 20 10681.0 21 11187.0 22 12389.0 23 14174.0 24 16527.0 25 19408.0 26 23041.0 27 27327.0 28 32404.0 29 38309.0 30 45189.0 31 55421.0 32 68789.0 33 89022.0 34 123813.0 35 181225.0 36 302933.0 37 543045.0 38 565428.0 39 103920.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.65689745620055 18.327645279874698 12.61041254711415 25.40504471681061 2 16.859479244432215 19.616429760118816 37.813942891739316 25.710148103709646 3 19.653194682675814 22.681671564423368 29.303693497124407 28.36144025577641 4 14.001579770113493 15.151524706768967 35.08615028785083 35.76074523526671 5 14.725926031026468 36.4277429172416 34.03393354939377 14.81239750233816 6 34.815030792083505 33.907974420703 16.386589387665044 14.890405399548461 7 29.559109353693184 31.22931742936652 20.48350181456991 18.728071402370386 8 27.125315760917317 33.96895958378465 19.74591761669117 19.159807038606857 9 26.81462965057152 15.121634651188174 19.21543394170032 38.84830175653999 10-11 26.00597864858427 24.807569513660006 27.47737320097271 21.709078636783012 12-13 26.269176276436678 22.451466138059537 27.260019107563682 24.019338477940103 14-15 23.600896857451847 24.211466186156645 24.33196810472848 27.855668851663022 16-17 23.765423950020747 27.190404828322418 25.508010622246267 23.536160599410564 18-19 23.815688605506544 26.43979485668003 26.783906994759903 22.96060954305352 20-21 24.120853107181002 25.66544452515872 26.84782653668582 23.36587583097446 22-23 24.087116708043276 25.52193052119548 26.48103487892268 23.909917891838568 24-25 23.86921320266582 25.683898932817158 26.538697472177518 23.908190392339502 26-27 23.606687160782126 25.96986805451839 26.594208238445265 23.829236546254215 28-29 23.669546012898447 26.21670848269388 26.458482940144467 23.655262564263204 30-31 24.023694213912204 25.782419679695895 26.359803127393533 23.834082978998364 32-33 23.709501080496498 25.884500144788504 26.202404474063158 24.203594300651844 34-35 24.07104916660954 26.003177072129464 26.23919208442565 23.686581676835345 36-37 23.99726913838795 25.921281692787524 26.359157151788555 23.722292017035976 38-39 23.854458164729834 25.992011040664583 26.437120334340193 23.71641046026539 40-41 24.017206530965037 25.784090656151655 26.44139069710364 23.757312115779673 42-43 23.910521654357332 25.769702750123415 26.23624489238403 24.083530703135224 44-45 23.794421803181248 25.818282352996896 26.36230415175777 24.024991692064084 46-47 23.886031171214732 25.936207058173437 26.143107352716257 24.034654417895574 48-49 23.670883428013447 26.038583543934585 26.24348806983213 24.047044958219843 50-51 23.73639957800062 26.043878147481124 26.362212978651772 23.857509295866482 52-53 24.01936260419448 25.78767643026457 26.3026073955312 23.89035357000975 54-55 23.51133344871663 25.772043521737682 26.524416296357987 24.192206733187703 56-57 23.58169788098428 25.9834424512088 26.293151428979698 24.141708238827228 58-59 23.60877399694876 25.844370893603248 26.42100817282737 24.125846936620622 60-61 23.595693011189457 25.849058018898834 26.57260671746251 23.9826422524492 62-63 23.68469510947149 25.81556669527802 26.62079639564036 23.878941799610125 64-65 23.490959861100393 25.65397347889082 26.53453019836852 24.320536461640273 66-67 23.501090853115223 25.863510642601785 26.35570198938848 24.27969651489451 68-69 23.54702323839235 25.726207161404936 26.514292457912802 24.212477142289913 70-71 23.444557463059848 25.593119172374873 26.527906992804844 24.43441637176043 72-73 23.501007767326712 25.77522309209932 26.39365716335697 24.330111977217 74-75 23.45217918260845 25.95661071773405 26.370885006621403 24.22032509303609 76-77 23.540433045446722 25.632629639744454 26.397803674066683 24.429133640742137 78-79 23.465785416020253 25.690820924215764 26.410873442396195 24.432520217367788 80-81 23.596489912129368 25.746316089508188 26.301458878297318 24.355735120065123 82-83 23.60415259446355 25.74653572132123 26.43202884092683 24.217282843288395 84-85 23.576592760030056 25.79175883531073 26.382282934824637 24.249365469834576 86-87 23.51891173523334 25.934057864011123 26.24687791923928 24.300152481516253 88-89 23.437406230555176 25.747845869090746 26.331763007697383 24.482984892656688 90-91 23.551000079160637 25.65694938595232 26.2938273062346 24.49822322865244 92-93 23.643033010837257 25.53823047256256 26.491899694560523 24.326836822039656 94-95 23.59968639182581 25.41065316148195 26.54597240350734 24.443688043184896 96-97 23.644647356581096 25.242146072256254 26.53839608064731 24.574810490515343 98-99 23.559428438313113 25.328482139684372 26.398679675130595 24.71340974687193 100-101 23.77802926530324 25.206960588543986 26.508250585294217 24.506759560858555 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 109.0 1 91.0 2 102.0 3 142.0 4 141.0 5 163.5 6 260.0 7 463.5 8 718.0 9 824.0 10 717.0 11 653.5 12 682.0 13 728.0 14 796.5 15 864.5 16 962.5 17 1068.5 18 1204.5 19 1313.0 20 1405.5 21 1564.5 22 1763.5 23 2016.5 24 2357.5 25 2861.0 26 3559.5 27 4679.5 28 6493.5 29 8975.0 30 12316.0 31 16985.5 32 23733.5 33 28558.0 34 31924.5 35 37018.5 36 43372.0 37 49958.5 38 56251.5 39 62576.0 40 68119.0 41 73085.5 42 78248.0 43 84380.5 44 90389.0 45 97185.0 46 101574.5 47 104153.0 48 108090.5 49 110019.0 50 109260.0 51 108509.0 52 108424.5 53 106662.0 54 103636.5 55 98772.5 56 92163.5 57 83846.5 58 75890.5 59 67269.0 60 55612.5 61 45612.0 62 37827.5 63 29656.0 64 21660.0 65 15886.0 66 12018.0 67 9344.0 68 7464.5 69 5876.0 70 4478.5 71 3287.5 72 2389.5 73 1834.0 74 1451.5 75 1104.0 76 822.5 77 563.5 78 348.0 79 238.5 80 184.5 81 137.0 82 100.0 83 88.5 84 75.5 85 58.0 86 57.0 87 44.5 88 31.0 89 30.5 90 25.5 91 23.0 92 25.0 93 20.0 94 15.5 95 12.0 96 9.5 97 8.0 98 6.0 99 6.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.049085361649993005 2 0.056294527927640454 3 0.04802171416640568 4 0.053458134638074244 5 0.0465641231703786 6 0.017530486303568932 7 0.014497121257782847 8 0.020406273944379116 9 0.02158810448169837 10-11 0.02247447738468781 12-13 0.027438165641428678 14-15 0.04455501125693587 16-17 0.029230608623029546 18-19 0.02361691357076309 20-21 0.026650278616549172 22-23 0.04617017965793885 24-25 0.04150194903552779 26-27 0.0313579035902042 28-29 0.020977492037416758 30-31 0.01366983988165937 32-33 0.009848587810993781 34-35 0.009809193459749807 36-37 0.0016545627522469553 38-39 0.007169771926403472 40-41 0.0038015548950436 42-43 0.20999158930600942 44-45 0.18566557741285478 46-47 0.1909641176551694 48-49 0.18972319559098422 50-51 0.18838378764868907 52-53 0.19269746910990435 54-55 0.19108230070890134 56-57 0.2004778534805894 58-59 0.19854753026963462 60-61 0.20315666936517973 62-63 0.1992763257676482 64-65 0.2006945224124313 66-67 0.19175200468004894 68-69 0.19011713910342395 70-71 0.17481243364513963 72-73 0.1818443253421892 74-75 0.1814700790053714 76-77 0.1799140021312344 78-79 0.2055203304398182 80-81 0.21245373625875785 82-83 0.2114688774776585 84-85 0.20727337907017512 86-87 0.223326577202095 88-89 0.22167201444984802 90-91 0.22102200765432245 92-93 0.22419325292946246 94-95 0.23540094585837337 96-97 0.23542064303399535 98-99 0.2255326608717576 100-101 0.23431760119916406 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2538435.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.35649862655349 #Duplication Level Percentage of deduplicated Percentage of total 1 78.99116260860187 48.466211601045444 2 11.577037156545478 14.206529287902828 3 3.8439228448103115 7.075489402445445 4 1.8042464636331406 4.428089826714832 5 0.9848282205024705 3.021280567932548 6 0.6447174137494538 2.373456186674009 7 0.423599578699424 1.8193410878075893 8 0.3082643198894298 1.5131215455929 9 0.23518948709515008 1.2987363097740057 >10 1.130731866334511 11.824763909851564 >50 0.04178920056364635 1.7152446534070727 >100 0.013160391207456842 1.4700247864997653 >500 8.359918466752846E-4 0.3775598564404705 >1k 5.144565210189269E-4 0.41015097791149235 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 3.9394351243975124E-5 7 0.0 0.0 0.0 0.0 3.9394351243975124E-5 8 0.0 0.0 0.0 0.0 3.9394351243975124E-5 9 0.0 0.0 0.0 0.0 3.9394351243975124E-5 10-11 0.0 0.0 0.0 0.0 5.909152686596269E-5 12-13 0.0 0.0 0.0 3.9394351243975124E-5 2.5606328308583836E-4 14-15 0.0 0.0 0.0 3.9394351243975124E-5 4.1364068806173883E-4 16-17 0.0 0.0 0.0 3.9394351243975124E-5 5.121265661716766E-4 18-19 0.0 0.0 0.0 3.9394351243975124E-5 6.697039711475772E-4 20-21 0.0 0.0 0.0 3.9394351243975124E-5 6.697039711475772E-4 22-23 0.0 0.0 0.0 1.3788022935391295E-4 6.894011467695647E-4 24-25 0.0 0.0 0.0 4.924293905496891E-4 7.090983223915523E-4 26-27 0.0 0.0 0.0 0.0013197107666731668 7.090983223915523E-4 28-29 0.0 0.0 0.0 0.005613695052266455 7.090983223915523E-4 30-31 0.0 0.0 0.0 0.024385103420020607 7.090983223915523E-4 32-33 0.0 0.0 0.0 0.0619279201555289 7.484926736355274E-4 34-35 0.0 0.0 0.0 0.11434210448563781 7.484926736355274E-4 36-37 0.0 0.0 0.0 0.18732014016510173 7.484926736355274E-4 38-39 0.0 0.0 0.0 0.2887605946183377 7.484926736355274E-4 40-41 0.0 0.0 0.0 0.40054206627311706 7.484926736355274E-4 42-43 0.0 0.0 0.0 0.5282191586548405 7.484926736355274E-4 44-45 0.0 0.0 0.0 0.700077015956682 7.68189849257515E-4 46-47 0.0 0.0 0.0 0.9007124468422473 7.878870248795026E-4 48-49 0.0 0.0 0.0 1.0847234615028551 7.878870248795026E-4 50-51 0.0 0.0 0.0 1.2647162523365774 7.878870248795026E-4 52-53 0.0 0.0 0.0 1.4531591315121324 8.075842005014901E-4 54-55 0.0 0.0 0.0 1.697975327317816 8.272813761234777E-4 56-57 0.0 0.0 0.0 1.9879965411759608 9.060700786114278E-4 58-59 0.0 0.0 0.0 2.280066261298792 9.45464429855403E-4 60-61 0.0 0.0 0.0 2.56268133712307 9.45464429855403E-4 62-63 0.0 0.0 0.0 2.855558641446403 9.45464429855403E-4 64-65 0.0 0.0 0.0 3.191651549084377 9.651616054773906E-4 66-67 0.0 0.0 0.0 3.61098472090087 9.848587810993782E-4 68-69 0.0 0.0 0.0 4.041761951753738 9.848587810993782E-4 70-71 0.0 0.0 0.0 4.460996637692121 0.0010045559567213656 72-73 0.0 0.0 0.0 4.885608652575307 0.001260619239807204 74-75 0.0 0.0 0.0 5.360842408807001 0.001260619239807204 76-77 0.0 0.0 0.0 5.936925704223271 0.001260619239807204 78-79 0.0 0.0 0.0 6.567570176112447 0.0012803164154291916 80-81 0.0 0.0 0.0 7.170835573887061 0.0013197107666731668 82-83 0.0 0.0 0.0 7.783319249852764 0.0014575909960270798 84-85 0.0 0.0 0.0 8.436930628517176 0.0014575909960270798 86-87 1.9697175621987562E-5 0.0 0.0 9.180577796949695 0.001496985347271055 88-89 3.9394351243975124E-5 0.0 0.0 9.987078652791975 0.00153637969851503 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2200 0.0 53.066517 1 GTATCAA 3695 0.0 38.788292 1 TCAACGC 4500 0.0 30.689415 4 CAACGCA 4615 0.0 30.129154 5 TATCAAC 4795 0.0 29.29793 2 ATCAACG 4800 0.0 28.8702 3 AACGCAG 4965 0.0 27.996971 6 GTACATG 6495 0.0 27.692884 1 TACATGG 6785 0.0 26.370924 2 ACATGGG 7095 0.0 24.213875 3 ACGCAGA 5975 0.0 22.633232 7 CGCAGAG 6275 0.0 21.478512 8 CATGGGG 6000 0.0 21.356037 4 GTGTACG 280 1.5952537E-9 20.339083 1 GAGTACA 5015 0.0 18.7371 1 GTGGTAT 1125 0.0 18.561296 1 ATGGGGG 3805 0.0 18.08441 5 GCAGAGT 6980 0.0 17.745005 9 CAGAGTA 6275 0.0 17.205328 10-11 AGAGTAC 5720 0.0 17.173927 10-11 >>END_MODULE