##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921372_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2538435 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.355120773232326 33.0 31.0 34.0 28.0 34.0 2 31.480520478168636 34.0 31.0 34.0 28.0 34.0 3 31.55335984573172 34.0 31.0 34.0 28.0 34.0 4 35.039009862375835 37.0 35.0 37.0 32.0 37.0 5 34.76224563559831 37.0 35.0 37.0 32.0 37.0 6 34.71806447673468 37.0 35.0 37.0 32.0 37.0 7 34.57571810978024 37.0 35.0 37.0 32.0 37.0 8 34.53783925922862 37.0 35.0 37.0 32.0 37.0 9 36.15522556220664 39.0 37.0 39.0 32.0 39.0 10-11 36.007344682845925 39.0 37.0 39.0 31.0 39.0 12-13 35.93730507182575 39.0 37.0 39.0 31.0 39.0 14-15 37.17752473472829 40.0 38.0 41.0 31.0 41.0 16-17 37.14909914967293 40.0 38.0 41.0 31.0 41.0 18-19 37.11099181188409 40.0 38.0 41.0 31.0 41.0 20-21 37.0703760387798 40.0 38.0 41.0 31.0 41.0 22-23 36.959105905804165 40.0 37.5 41.0 30.5 41.0 24-25 36.886685694138315 40.0 37.0 41.0 30.0 41.0 26-27 36.74840994549791 40.0 37.0 41.0 30.0 41.0 28-29 36.59221764591175 40.0 37.0 41.0 30.0 41.0 30-31 36.44712076535346 40.0 37.0 41.0 30.0 41.0 32-33 36.387035319005605 40.0 36.5 41.0 29.5 41.0 34-35 36.51319159245756 40.0 37.0 41.0 30.0 41.0 36-37 36.48171353609606 40.0 37.0 41.0 30.0 41.0 38-39 36.38676822530417 40.0 37.0 41.0 29.5 41.0 40-41 36.254029549702864 40.0 36.5 41.0 29.0 41.0 42-43 36.139251546720715 40.0 36.0 41.0 28.5 41.0 44-45 35.99096746617502 40.0 36.0 41.0 28.0 41.0 46-47 35.825423735490574 40.0 35.5 41.0 27.5 41.0 48-49 35.654902134582926 40.0 35.0 41.0 27.0 41.0 50-51 35.488216558627656 39.5 35.0 41.0 26.0 41.0 52-53 35.30494891537502 39.0 35.0 41.0 26.0 41.0 54-55 35.088127133450335 39.0 35.0 41.0 26.0 41.0 56-57 34.81887087910465 39.0 35.0 41.0 25.0 41.0 58-59 34.58938716177487 38.0 34.5 40.0 24.5 41.0 60-61 34.3094054013595 38.0 34.0 40.0 23.5 41.0 62-63 34.004839005135054 37.0 34.0 40.0 23.0 41.0 64-65 33.68552119711555 37.0 34.0 40.0 22.5 41.0 66-67 33.34443466151389 36.0 34.0 39.0 22.0 41.0 68-69 32.983016110319944 36.0 33.5 39.0 21.5 41.0 70-71 32.60116193638994 35.0 33.0 38.5 20.0 40.0 72-73 32.20891710837583 35.0 33.0 37.5 19.5 39.5 74-75 31.817634487390855 35.0 33.0 37.0 18.0 39.0 76-77 29.08185358301473 33.0 28.5 34.5 10.0 36.5 78-79 30.7330900732144 34.5 31.5 36.0 11.5 37.0 80-81 30.93816111107828 35.0 32.0 35.5 12.0 37.0 82-83 30.790997011938458 35.0 32.0 35.0 9.5 37.0 84-85 30.566516968131943 35.0 32.0 35.0 7.0 36.0 86-87 30.329706689357813 35.0 32.0 35.0 2.0 36.0 88-89 30.054117202134385 35.0 31.5 35.0 2.0 36.0 90-91 29.880792890107486 34.5 31.0 35.0 2.0 35.0 92-93 29.744399403569524 34.0 31.0 35.0 2.0 35.0 94-95 29.65345419520295 34.0 31.0 35.0 2.0 35.0 96-97 29.466138782359998 34.0 31.0 35.0 2.0 35.0 98-99 29.20182671606718 34.0 31.0 35.0 2.0 35.0 100-101 28.123639368350972 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 51349.0 3 17670.0 4 9248.0 5 6602.0 6 5792.0 7 5840.0 8 5966.0 9 6498.0 10 6875.0 11 7666.0 12 8276.0 13 8795.0 14 9686.0 15 10560.0 16 11706.0 17 12632.0 18 11622.0 19 10155.0 20 9711.0 21 9634.0 22 10039.0 23 11188.0 24 12940.0 25 15650.0 26 18941.0 27 22697.0 28 27341.0 29 32369.0 30 39776.0 31 49260.0 32 62392.0 33 83274.0 34 118898.0 35 179170.0 36 315961.0 37 606668.0 38 625750.0 39 79837.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41667873257824 19.513715489355892 12.976266516326065 26.0933392617398 2 16.059411806881293 20.953444231801065 36.35630538390446 26.630838577413172 3 18.462265786280476 23.74580424539452 29.03068219424177 28.761247774083238 4 13.682254816872755 16.229415002145124 34.15676607768061 35.93156410330152 5 14.543707844403611 36.863294599867366 33.93332180090323 14.659675754825791 6 34.83016684112019 34.53226300158013 16.09019529207931 14.547374865220378 7 29.507984250138374 31.52993872208664 20.361561355717203 18.60051567205778 8 27.190617374607722 34.5191881165808 19.3697274733552 18.920467035456277 9 26.739280989775587 15.187670823822877 19.104889077281506 38.96815910912003 10-11 26.055354827897254 25.136868878559493 27.34780872762763 21.459967565915623 12-13 26.3394945575601 22.61262327750288 27.234595248755184 23.813286916181838 14-15 23.522380650810238 24.436260918982114 24.300027873013306 27.74133055719434 16-17 23.72894242597041 27.448843821617913 25.431748592386427 23.39046516002525 18-19 23.779177816143687 26.6253943147762 26.795165107463394 22.800262761616715 20-21 24.090160233909835 25.77859639916893 26.84044052703775 23.290802839883487 22-23 24.054689795960176 25.592532537879777 26.537113943837635 23.815663722322416 24-25 23.84847784097154 25.86376226608798 26.522188574618433 23.765571318322046 26-27 23.58294778377288 26.13155381725581 26.623326483788006 23.6621719151833 28-29 23.672994856343212 26.34508831204851 26.49195988451986 23.489956947088412 30-31 23.997045765807794 25.957899995744764 26.387698124388308 23.657356114059127 32-33 23.759845079134934 25.98541411387393 26.221262612930296 24.03347819406084 34-35 24.05363322889941 26.07252274116987 26.323278416218564 23.550565613712156 36-37 23.99472821261116 26.039229945580278 26.413281815682048 23.55276002612651 38-39 23.872093405748156 26.087537161249834 26.49828309264327 23.542086340358736 40-41 23.989838900558954 25.945038978721257 26.418582772461026 23.64653934825876 42-43 23.897965262188293 25.929137574688344 26.177816370093304 23.99508079303006 44-45 23.776442805846944 26.008051330581267 26.303318002343378 23.912187861228407 46-47 23.92737196750366 26.045571387681832 26.1414269637047 23.885629681109812 48-49 23.670125481009222 26.185911566402815 26.23655863141426 23.907404321173704 50-51 23.80325692347392 26.179979789503545 26.219731038870737 23.797032248151805 52-53 24.054838707771207 25.951828905690004 26.15638774112484 23.83694464541395 54-55 23.482242469319452 25.93528799062092 26.3698503318605 24.21261920819913 56-57 23.601072303251676 26.08778128606658 26.126961445659248 24.1841849650225 58-59 23.56514584092978 26.026128425590876 26.288933448139396 24.119792285339948 60-61 23.58380327801683 26.03597292929516 26.426380936096717 23.953842856591294 62-63 23.598988880721848 25.967565931876123 26.407108489252966 24.02633669814906 64-65 23.372007997523582 25.770437497327624 26.397443503746054 24.46011100140274 66-67 23.331693914129115 26.057780068761026 26.147120533567897 24.463405483541965 68-69 23.43784971896387 25.87886838430233 26.26621907893285 24.417062817800954 70-71 23.27755386686903 25.6807168599758 26.355576215833608 24.686153057321565 72-73 23.208804251284786 25.929535096505834 26.175124341253397 24.68653631095598 74-75 23.10946944390209 25.96913191920796 26.14394872408163 24.777449912808322 76-77 23.17905625191888 25.629417124647446 26.297636335456154 24.893890287977523 78-79 23.010432149635427 25.689082244018913 26.28824048956026 25.012245116785397 80-81 23.013403384340258 25.799066104823847 26.182332459666576 25.00519805116932 82-83 22.92222322479419 25.752142406548362 26.337484637992496 24.98814973066495 84-85 22.886948948659015 25.705742746323534 26.299514204900902 25.10779410011655 86-87 22.769487103616 25.904838467711777 26.12972852135381 25.195945907318407 88-89 22.618847067564428 25.687643072793303 26.202354575041092 25.491155284601174 90-91 22.528778740455746 25.46169384996385 26.31672234663244 25.692805062947965 92-93 22.51104202156298 25.348228665032796 26.526766900816117 25.613962412588105 94-95 22.32636821957226 25.175145578743713 26.64578537668857 25.852700824995463 96-97 22.248693409219445 25.07537360784134 26.5918088464238 26.08412413651542 98-99 22.119798149354427 25.139009179559736 26.46292770104453 26.278264970041302 100-101 21.983652649530626 25.048958140051596 26.548745604010097 26.418643606407677 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 85.0 1 75.0 2 88.0 3 117.0 4 109.5 5 122.0 6 213.5 7 412.5 8 647.5 9 727.0 10 589.5 11 488.0 12 497.0 13 529.0 14 571.0 15 593.0 16 648.5 17 715.0 18 781.5 19 892.0 20 979.0 21 1132.0 22 1386.0 23 1632.0 24 1953.0 25 2467.0 26 3265.5 27 4575.5 28 6567.5 29 9256.0 30 12911.5 31 17625.0 32 24408.0 33 29204.0 34 32143.5 35 37031.0 36 43238.0 37 49578.0 38 55914.0 39 62760.0 40 68345.5 41 72964.5 42 78358.0 43 84686.5 44 90655.5 45 97179.5 46 101734.0 47 105345.5 48 108985.5 49 110807.0 50 111057.5 51 110200.5 52 109618.0 53 108107.0 54 104746.0 55 99421.5 56 92684.5 57 83937.0 58 75615.0 59 66757.0 60 55198.5 61 45251.5 62 37484.5 63 28856.0 64 20617.0 65 15183.0 66 11680.0 67 9138.0 68 7116.0 69 5416.5 70 4038.0 71 2999.5 72 2147.5 73 1533.0 74 1183.0 75 883.0 76 620.5 77 386.0 78 235.5 79 144.0 80 87.5 81 50.5 82 29.5 83 19.5 84 10.0 85 8.0 86 8.0 87 6.0 88 4.5 89 5.0 90 2.5 91 0.0 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1475712397599308 2 6.697039711475772E-4 3 0.006106124442816144 4 0.004648533446789065 5 0.026157849225999487 6 0.001260619239807204 7 0.0 8 0.0016151684010029801 9 3.9394351243975124E-5 10-11 0.09937225101292727 12-13 2.1666893184186321E-4 14-15 0.00541672329604658 16-17 2.9545763432981345E-4 18-19 4.92429390549689E-4 20-21 8.272813761234777E-4 22-23 3.5454916119577614E-4 24-25 0.0013394079422951544 26-27 0.0026394215333463335 28-29 0.006421279252767946 30-31 0.015088036526442474 32-33 0.014378938204050921 34-35 0.012094065831900364 36-37 6.697039711475772E-4 38-39 1.7727458059788807E-4 40-41 0.005003082607984841 42-43 0.008706151624918503 44-45 0.008706151624918503 46-47 0.009513735825419993 48-49 0.011109207050800986 50-51 0.0059091526865962685 52-53 0.001792442981600868 54-55 7.484926736355274E-4 56-57 0.006322793374658008 58-59 0.009513735825419993 60-61 0.0076031097900872 62-63 0.017944126991630668 64-65 0.035435218943955626 66-67 0.03746402803302035 68-69 0.02690634189963501 70-71 0.04299893438279885 72-73 0.02603966617226756 74-75 0.025035110215546195 76-77 0.23764642387927992 78-79 0.06734464345157548 80-81 0.05619604204953051 82-83 0.020406273944379116 84-85 0.03318974092304904 86-87 0.08211752516806615 88-89 0.2649467092913547 90-91 0.3171836190408657 92-93 0.05156720577836344 94-95 0.004648533446789065 96-97 0.009671313230395894 98-99 9.257672542334155E-4 100-101 0.0016545627522469553 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2538435.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.73866857458068 #Duplication Level Percentage of deduplicated Percentage of total 1 78.37705496690559 47.605179654865715 2 11.994696893112119 14.570838384865791 3 3.9620844048925914 7.2195519459985755 4 1.8352727754467353 4.458880994072404 5 0.9964057416837616 3.0260179054969627 6 0.6241126693756437 2.274466354704244 7 0.4403865897579064 1.8723946583996711 8 0.31030087587678506 1.5077809646625715 9 0.24298126982819113 1.3282522936132737 >10 1.1589056525755774 12.126022351046927 >50 0.043367526972240764 1.7672714354576544 >100 0.01299808612103822 1.4199814585039305 >500 9.116211057390632E-4 0.3981545398333625 >1k 5.209263461296719E-4 0.4252070584788336 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.9394351243975124E-5 3.9394351243975124E-5 5 0.0 0.0 0.0 3.9394351243975124E-5 7.878870248795025E-5 6 0.0 0.0 0.0 3.9394351243975124E-5 1.575774049759005E-4 7 0.0 0.0 0.0 3.9394351243975124E-5 1.575774049759005E-4 8 0.0 0.0 0.0 3.9394351243975124E-5 2.3636610746385076E-4 9 0.0 0.0 0.0 3.9394351243975124E-5 2.3636610746385076E-4 10-11 0.0 0.0 0.0 3.9394351243975124E-5 2.3636610746385076E-4 12-13 0.0 0.0 0.0 7.878870248795025E-5 2.3636610746385076E-4 14-15 0.0 0.0 0.0 7.878870248795025E-5 2.5606328308583836E-4 16-17 0.0 0.0 0.0 7.878870248795025E-5 3.15154809951801E-4 18-19 0.0 0.0 0.0 7.878870248795025E-5 3.15154809951801E-4 20-21 0.0 0.0 0.0 7.878870248795025E-5 3.3485198557378854E-4 22-23 0.0 0.0 0.0 1.3788022935391295E-4 4.1364068806173883E-4 24-25 0.0 3.9394351243975124E-5 0.0 4.924293905496891E-4 5.515209174156518E-4 26-27 0.0 7.878870248795025E-5 0.0 0.001359105117917142 5.909152686596269E-4 28-29 0.0 7.878870248795025E-5 0.0 0.0056924837547544065 5.909152686596269E-4 30-31 0.0 7.878870248795025E-5 0.0 0.024621469527484455 6.303096199036021E-4 32-33 0.0 7.878870248795025E-5 0.0 0.06312944786847013 6.697039711475772E-4 34-35 0.0 7.878870248795025E-5 0.0 0.11629212487221458 7.090983223915523E-4 36-37 0.0 7.878870248795025E-5 0.0 0.18952622383476433 7.090983223915523E-4 38-39 0.0 7.878870248795025E-5 0.0 0.29082879805864637 7.484926736355274E-4 40-41 0.0 7.878870248795025E-5 0.0 0.40231481207909603 7.484926736355274E-4 42-43 0.0 1.1818305373192538E-4 0.0 0.5291252287334519 7.484926736355274E-4 44-45 0.0 1.1818305373192538E-4 0.0 0.6996042837417542 7.68189849257515E-4 46-47 0.0 1.1818305373192538E-4 0.0 0.8988018208069145 7.878870248795026E-4 48-49 0.0 1.1818305373192538E-4 0.0 1.0827340467650344 8.272813761234777E-4 50-51 0.0 1.1818305373192538E-4 0.0 1.2616040985883035 8.272813761234777E-4 52-53 0.0 1.1818305373192538E-4 0.0 1.4501848579932122 8.469785517454653E-4 54-55 0.0 1.1818305373192538E-4 0.0 1.6950010537988958 8.666757273674527E-4 56-57 0.0 1.1818305373192538E-4 0.0 1.983052550094842 8.863729029894403E-4 58-59 0.0 1.1818305373192538E-4 0.0 2.274255594490306 9.060700786114279E-4 60-61 0.0 1.1818305373192538E-4 0.0 2.5563191493971678 9.060700786114279E-4 62-63 0.0 1.1818305373192538E-4 0.0 2.848940390437415 9.45464429855403E-4 64-65 0.0 1.1818305373192538E-4 0.0 3.1852499670072305 9.45464429855403E-4 66-67 0.0 1.1818305373192538E-4 0.0 3.604563441648102 9.651616054773906E-4 68-69 0.0 1.1818305373192538E-4 0.0 4.0346315741785785 9.848587810993782E-4 70-71 0.0 1.1818305373192538E-4 0.0 4.456801139284638 9.848587810993782E-4 72-73 0.0 1.1818305373192538E-4 0.0 4.8833828717300225 0.0010439503079653408 74-75 0.0 1.1818305373192538E-4 0.0 5.3611378664413305 0.0010636474835873284 76-77 0.0 1.1818305373192538E-4 0.0 5.940746956293937 0.0010636474835873284 78-79 0.0 1.1818305373192538E-4 0.0 6.574168729945813 0.0010636474835873284 80-81 0.0 1.1818305373192538E-4 0.0 7.182023569640349 0.001083344659209316 82-83 0.0 1.1818305373192538E-4 0.0 7.798820927067268 0.0011621333616972662 84-85 0.0 1.1818305373192538E-4 0.0 8.458518732998876 0.0012015277129412414 86-87 0.0 1.1818305373192538E-4 0.0 9.20935537053342 0.0012606192398072042 88-89 0.0 1.1818305373192538E-4 0.0 10.023912371205093 0.0013000135910511792 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2060 0.0 55.366726 1 GTATCAA 3695 0.0 40.38499 1 TCAACGC 4720 0.0 31.168545 4 CAACGCA 4850 0.0 30.085793 5 TATCAAC 4930 0.0 29.840878 2 ATCAACG 5005 0.0 29.298893 3 AACGCAG 5135 0.0 28.413744 6 GTACATG 5960 0.0 27.509182 1 ACCGTAT 160 6.2162144E-8 26.732803 8 TACATGG 6260 0.0 26.002588 2 ACATGGG 6665 0.0 23.781713 3 ACGCAGA 6235 0.0 22.943094 7 CGCAGAG 6520 0.0 21.648651 8 CATGGGG 5715 0.0 20.759676 4 GCAGAGT 7305 0.0 18.021109 9 CTTAGCG 290 5.2750693E-8 18.000786 3 AGAGTAC 6000 0.0 17.74266 10-11 TAAGGTG 1175 0.0 17.393839 5 ATGGGGG 3480 0.0 17.345598 5 TACCGTA 220 2.9062829E-5 17.28181 7 >>END_MODULE