##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921371_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3671808 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.465716616990868 31.0 31.0 34.0 26.0 34.0 2 30.504237149654884 31.0 31.0 34.0 26.0 34.0 3 30.555744472477866 33.0 31.0 34.0 26.0 34.0 4 34.02608769303841 37.0 35.0 37.0 30.0 37.0 5 34.023789914941084 37.0 35.0 37.0 30.0 37.0 6 34.07449545292128 37.0 35.0 37.0 30.0 37.0 7 33.99288715531967 37.0 35.0 37.0 30.0 37.0 8 33.95837663625113 37.0 35.0 37.0 30.0 37.0 9 35.51765479022868 39.0 37.0 39.0 30.0 39.0 10-11 35.41044330204629 39.0 37.0 39.0 30.0 39.0 12-13 35.28015585237572 39.0 35.0 39.0 29.0 39.0 14-15 36.40800050002615 40.0 37.0 41.0 29.0 41.0 16-17 36.3507996605487 40.0 37.0 41.0 28.5 41.0 18-19 36.29872150177787 40.0 36.5 41.0 28.0 41.0 20-21 36.235161942018756 40.0 36.5 41.0 27.0 41.0 22-23 36.128784511608444 40.0 36.0 41.0 27.0 41.0 24-25 36.02418181996444 40.0 36.0 41.0 27.0 41.0 26-27 35.876264363496134 40.0 36.0 41.0 27.0 41.0 28-29 35.73954588584152 40.0 36.0 41.0 27.0 41.0 30-31 35.59390469218434 40.0 35.5 41.0 26.0 41.0 32-33 35.41897629178868 39.5 35.0 41.0 25.0 41.0 34-35 35.268605684175206 39.0 35.0 41.0 25.0 41.0 36-37 35.11112046163634 39.0 35.0 41.0 24.5 41.0 38-39 35.358624552264175 39.5 35.0 41.0 25.0 41.0 40-41 35.487422544969675 40.0 35.0 41.0 25.0 41.0 42-43 35.333662326570455 40.0 35.0 41.0 24.5 41.0 44-45 35.23012327986649 40.0 35.0 41.0 24.0 41.0 46-47 35.086493084605735 40.0 35.0 41.0 23.5 41.0 48-49 34.951174189935855 39.5 35.0 41.0 23.0 41.0 50-51 33.23662130481768 37.0 32.5 39.5 19.0 40.0 52-53 33.39650684349509 37.5 33.5 39.5 20.5 40.0 54-55 34.26392474769923 39.0 34.0 40.5 21.5 41.0 56-57 34.28464315127589 39.0 34.0 41.0 21.0 41.0 58-59 34.102819237825074 38.0 34.0 41.0 20.5 41.0 60-61 33.851054303492994 38.0 34.0 40.0 19.5 41.0 62-63 33.54927300120268 37.0 34.0 40.0 18.0 41.0 64-65 33.261007111482954 37.0 33.5 40.0 17.5 41.0 66-67 32.92423746012864 36.0 33.0 39.0 14.0 41.0 68-69 32.55506891972565 36.0 33.0 39.0 12.0 41.0 70-71 32.17749008118072 35.0 33.0 39.0 8.0 40.5 72-73 31.818596451666316 35.0 32.0 37.5 7.0 40.0 74-75 31.421585496845154 35.0 32.0 37.0 2.0 39.0 76-77 31.054963794403193 35.0 32.0 36.5 2.0 39.0 78-79 30.72426513042076 35.0 32.0 36.0 2.0 38.0 80-81 30.38611564112285 35.0 31.5 35.5 2.0 37.0 82-83 30.09300499917207 35.0 31.0 35.0 2.0 37.0 84-85 29.868788618577007 35.0 31.0 35.0 2.0 36.0 86-87 29.654390017125078 35.0 31.0 35.0 2.0 36.0 88-89 29.464883784773058 35.0 31.0 35.0 2.0 36.0 90-91 29.22010682475772 35.0 31.0 35.0 2.0 35.5 92-93 29.030954369073765 34.5 30.5 35.0 2.0 35.0 94-95 28.823054609609216 34.0 30.0 35.0 2.0 35.0 96-97 28.567478065301888 34.0 30.0 35.0 2.0 35.0 98-99 28.354331707976016 34.0 30.0 35.0 2.0 35.0 100-101 27.313141781923235 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 121601.0 3 21432.0 4 14994.0 5 11102.0 6 10268.0 7 10305.0 8 10866.0 9 11615.0 10 12494.0 11 13173.0 12 13192.0 13 13274.0 14 14227.0 15 15271.0 16 15049.0 17 15703.0 18 14967.0 19 14103.0 20 14511.0 21 15149.0 22 16999.0 23 19607.0 24 22800.0 25 27180.0 26 32303.0 27 38530.0 28 45580.0 29 54066.0 30 65640.0 31 79385.0 32 100089.0 33 130060.0 34 190907.0 35 265779.0 36 432771.0 37 794038.0 38 830867.0 39 141899.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.29409552791254 17.30305801364809 12.376524674356478 25.026321784082896 2 16.28057930952544 19.17467440612653 39.54890877376468 24.995837510583353 3 19.8320377352424 23.735099077899648 28.444974388220572 27.98788879863738 4 13.724370814079029 14.74833925654719 35.73894295566282 35.78834697371096 5 14.431504833734781 37.87171256989025 33.439036086800144 14.257746509574828 6 34.48849294001031 33.82377496505893 17.125960283625353 14.561771811305407 7 30.083932762268773 31.671366218574924 20.07868117644239 18.166019842713915 8 27.741625472651776 34.66358198473839 19.383428633224945 18.211363909384882 9 28.3021247582097 15.36978627113256 18.508286314580584 37.81980265607715 10-11 26.680390421483807 24.975095389357744 26.8863284651868 21.458185723971653 12-13 26.862398722234644 22.119392222396115 27.086165664632635 23.93204339073661 14-15 24.13855441547143 23.792060753142135 24.211329800552942 27.858055030833494 16-17 24.372700293825712 26.8199765522425 25.11489932406874 23.69242382986305 18-19 24.43813456603423 26.55975740428909 26.251296151541688 22.75081187813499 20-21 24.719498577572363 25.6148938239426 26.408173394787077 23.257434203697958 22-23 24.723540168111555 25.155767080837578 26.019716827749278 24.10097592330159 24-25 24.484671154185943 25.378396887299477 25.913863987868957 24.223067970645623 26-27 24.04936301372755 25.767966647083572 26.07053972373265 24.112130615456223 28-29 24.064665888234565 26.39217151366181 25.657260059745774 23.885902538357847 30-31 25.00335367693053 25.646565078969047 25.63257837355726 23.717502870543168 32-33 24.529257242046995 25.695074586843347 25.615542161241915 24.160126009867742 34-35 24.652379908292737 25.965765709328565 25.834905140046278 23.54694924233242 36-37 24.58505492338669 25.98401961353044 25.91334488640433 23.517580576678537 38-39 24.606365802400944 26.0300945974949 25.688972195984483 23.67456740411967 40-41 24.668520042950394 25.6799242308182 25.720723021016962 23.930832705214442 42-43 24.27576739460755 25.741542437745668 25.533483301845404 24.44920686580138 44-45 24.00809867383602 25.8230561729878 25.973941107672772 24.194904045503403 46-47 24.306600503685274 25.479601346708 25.671767961507193 24.54203018809953 48-49 23.998701175558907 25.851599757425436 25.868790080910486 24.28090898610517 50-51 24.28370333160797 25.6110558273057 26.04900452314603 24.056236317940304 52-53 24.46555845403246 25.55849496283522 25.962150318165445 24.013796264966874 54-55 23.586611451563016 25.392035103511944 26.45609871266476 24.565254732260275 56-57 23.939288751204828 25.534858373530607 25.906580781502598 24.619272093761975 58-59 24.187415507858827 25.599542862382258 26.137700154616866 24.07534147514205 60-61 24.56195050225564 25.613714121039667 26.12917803856544 23.695157338139254 62-63 24.343837392836328 25.474036209151187 26.293564066794595 23.888562331217894 64-65 23.9213972929203 25.122334901608806 26.42638545137393 24.529882354096962 66-67 24.052918598389518 25.48940958145448 26.047789530584016 24.40988228957199 68-69 23.9061892880687 25.48409920411433 26.231619974416404 24.378091533400568 70-71 23.95470996403708 25.272177270844825 26.187837646864963 24.585275118253133 72-73 23.830932516055505 25.92646654982824 25.778901992551244 24.463698941565006 74-75 23.76332792615498 25.764725125399384 26.10972775077523 24.362219197670406 76-77 23.72032384663162 25.19907558917821 26.12281797152639 24.957782592663783 78-79 23.65547513063251 25.294429721252733 26.371760727257442 24.67833442085732 80-81 24.064204180878264 25.600367033873393 25.8120911023489 24.523337682899438 82-83 24.05356268286662 25.69887611869237 25.994382981533924 24.253178216907088 84-85 24.01478462692451 25.7923839822019 25.768094991241636 24.424736399631954 86-87 23.54763404399928 26.10856995850373 25.8740727143445 24.46972328315249 88-89 23.5376171730261 25.617413223552177 26.121773284993594 24.723196318428126 90-91 24.03163225895381 25.272643650552112 26.196895731460163 24.49882835903392 92-93 24.223183803042286 25.169498522939982 26.10107335075279 24.50624432326494 94-95 24.04485428486099 25.291023519384915 26.027775336012667 24.63634685974143 96-97 23.695930059955433 25.157859894694095 26.265626119685653 24.880583925664816 98-99 23.369235287823432 25.082585049908612 26.244876478642258 25.303303183625697 100-101 23.710333100336854 25.26219610987333 26.25458093324439 24.77288985654542 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 94.0 1 77.0 2 99.5 3 144.5 4 153.0 5 180.5 6 286.5 7 550.0 8 788.5 9 870.5 10 770.0 11 651.0 12 679.5 13 774.0 14 874.0 15 949.5 16 1037.5 17 1099.0 18 1211.0 19 1356.5 20 1440.5 21 1589.0 22 1771.0 23 1828.0 24 1962.5 25 2352.0 26 2975.5 27 3915.5 28 5381.0 29 7838.5 30 11464.5 31 16865.0 32 25065.0 33 32428.5 34 39203.5 35 48082.5 36 59922.0 37 71734.0 38 81317.5 39 90871.0 40 97806.5 41 102883.5 42 108700.0 43 116697.0 44 125982.0 45 135861.0 46 143221.0 47 149132.5 48 157349.0 49 164336.0 50 168300.5 51 169385.5 52 167917.5 53 165529.5 54 163151.0 55 156181.0 56 144610.0 57 130710.0 58 115799.5 59 99508.0 60 81702.5 61 67013.0 62 54926.5 63 42756.0 64 31421.5 65 22911.0 66 17026.0 67 12750.0 68 9601.0 69 7250.5 70 5458.0 71 4106.0 72 2924.0 73 2075.5 74 1572.5 75 1187.5 76 904.0 77 629.5 78 407.0 79 296.0 80 220.5 81 163.0 82 127.5 83 109.0 84 86.0 85 64.5 86 65.0 87 62.0 88 48.5 89 42.0 90 37.0 91 35.0 92 30.5 93 24.0 94 23.0 95 28.0 96 22.5 97 11.5 98 8.0 99 8.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05022049083176463 2 0.05798233458830091 3 0.04948515826535592 4 0.05626655860001394 5 0.048150665830021616 6 0.017076056264379837 7 0.014597713170187546 8 0.020834422714913196 9 0.020562077319947015 10-11 0.021814866136791466 12-13 0.027901785714285712 14-15 0.043874843129052495 16-17 0.02980820347904901 18-19 0.022999568604894372 20-21 0.026444737851216624 22-23 0.04752427142159939 24-25 0.04233609164749355 26-27 0.03062523966394757 28-29 0.020521225510702085 30-31 0.012650443596179322 32-33 0.009518471554068188 34-35 0.009341447047340166 36-37 0.0015523687513072579 38-39 0.006863103953147877 40-41 0.003554107404308722 42-43 0.20985574409119434 44-45 0.18420080788537962 46-47 0.19117284999651396 48-49 0.18942983946873038 50-51 0.18740086627623231 52-53 0.19194903437216762 54-55 0.19035581381161543 56-57 0.20099090148504498 58-59 0.19788616398243045 60-61 0.20259773931534547 62-63 0.19935682911524788 64-65 0.20097728421529668 66-67 0.19090050460154778 68-69 0.18955239489646517 70-71 0.17337507843547376 72-73 0.1806330832113226 74-75 0.18025179965836996 76-77 0.17850878913058635 78-79 0.20483097155406818 80-81 0.21354602419298613 82-83 0.21146258192149484 84-85 0.2068871792860629 86-87 0.22401770462943596 88-89 0.22211128686467266 90-91 0.22177085512096492 92-93 0.22551560430174997 94-95 0.2369949626995747 96-97 0.23613707470543122 98-99 0.22637349229589349 100-101 0.23591919838945827 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3671808.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.1493892843491 #Duplication Level Percentage of deduplicated Percentage of total 1 74.04512602039685 37.87362975425966 2 13.335649253862252 13.6422063009068 3 4.883859640029361 7.4941931381394875 4 2.336446123640816 4.780311692800502 5 1.3350203144635555 3.4142736883505282 6 0.8336908675177291 2.558566723528263 7 0.6063092525220205 2.1708643588766083 8 0.40591608174008215 1.660988774536091 9 0.3167670000507056 1.458219473822608 >10 1.7485503474862372 16.194496006696344 >50 0.10726461310310044 3.7682404858952863 >100 0.04277494126950801 3.7578965499730996 >500 0.001821805991635564 0.6528928018559941 >1k 8.037379261235475E-4 0.5732202503587086 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.361726974830928E-5 0.0 12-13 0.0 0.0 0.0 5.446907899323712E-5 0.0 14-15 0.0 0.0 0.0 5.446907899323712E-5 4.085180924492784E-5 16-17 0.0 0.0 0.0 8.170361848985568E-5 1.361726974830928E-4 18-19 0.0 0.0 0.0 1.361726974830928E-4 1.361726974830928E-4 20-21 0.0 0.0 0.0 1.4978996723140207E-4 1.361726974830928E-4 22-23 0.0 0.0 0.0 2.3149358572125775E-4 1.6340723697971137E-4 24-25 0.0 0.0 0.0 5.174562504357526E-4 1.9064177647632992E-4 26-27 0.0 0.0 0.0 0.0010076779613748868 1.9064177647632992E-4 28-29 0.0 0.0 0.0 0.0027506884891584744 1.9064177647632992E-4 30-31 0.0 1.361726974830928E-5 0.0 0.010839346719654187 2.042590462246392E-4 32-33 0.0 2.723453949661856E-5 0.0 0.02820136564874852 2.1787631597294847E-4 34-35 2.723453949661856E-5 2.723453949661856E-5 0.0 0.05167753869483371 2.1787631597294847E-4 36-37 2.723453949661856E-5 2.723453949661856E-5 0.0 0.0892203513909224 2.1787631597294847E-4 38-39 2.723453949661856E-5 2.723453949661856E-5 0.0 0.1521457548978596 2.3149358572125775E-4 40-41 2.723453949661856E-5 2.723453949661856E-5 0.0 0.22631902321690023 2.4511085546956703E-4 42-43 2.723453949661856E-5 2.723453949661856E-5 0.0 0.3035017081503172 2.4511085546956703E-4 44-45 2.723453949661856E-5 2.723453949661856E-5 0.0 0.39879536184898556 2.587281252178763E-4 46-47 2.723453949661856E-5 2.723453949661856E-5 0.0 0.5048875104580631 2.859626647144949E-4 48-49 2.723453949661856E-5 2.723453949661856E-5 0.0 0.617856380290037 2.9957993446280413E-4 50-51 2.723453949661856E-5 2.723453949661856E-5 0.0 0.7468527766157708 2.9957993446280413E-4 52-53 2.723453949661856E-5 2.723453949661856E-5 0.0 0.8813641671895698 3.5404901345604124E-4 54-55 2.723453949661856E-5 2.723453949661856E-5 0.0 1.0393381135397057 4.085180924492784E-4 56-57 2.723453949661856E-5 2.723453949661856E-5 0.0 1.2135983145088196 4.085180924492784E-4 58-59 2.723453949661856E-5 2.723453949661856E-5 0.0 1.4024289941086243 4.085180924492784E-4 60-61 2.723453949661856E-5 2.723453949661856E-5 0.0 1.6095204324409118 4.085180924492784E-4 62-63 2.723453949661856E-5 2.723453949661856E-5 0.0 1.8323806691417417 4.3575263194589695E-4 64-65 2.723453949661856E-5 2.723453949661856E-5 0.0 2.074999564247368 4.3575263194589695E-4 66-67 2.723453949661856E-5 2.723453949661856E-5 0.0 2.354616581259151 4.3575263194589695E-4 68-69 2.723453949661856E-5 2.723453949661856E-5 0.0 2.65995662082549 4.3575263194589695E-4 70-71 2.723453949661856E-5 2.723453949661856E-5 0.0 2.984769356131911 4.3575263194589695E-4 72-73 2.723453949661856E-5 2.723453949661856E-5 0.0 3.330307575995259 5.174562504357527E-4 74-75 2.723453949661856E-5 2.723453949661856E-5 0.0 3.691832470543122 5.174562504357527E-4 76-77 2.723453949661856E-5 2.723453949661856E-5 0.0 4.091322313149272 5.310735201840619E-4 78-79 2.723453949661856E-5 2.723453949661856E-5 0.0 4.545934863696576 5.446907899323712E-4 80-81 2.723453949661856E-5 2.723453949661856E-5 0.0 5.02255292215715 5.583080596806805E-4 82-83 2.723453949661856E-5 2.723453949661856E-5 0.0 5.508566896744056 5.719253294289898E-4 84-85 2.723453949661856E-5 2.723453949661856E-5 0.0 6.021175399149411 5.719253294289898E-4 86-87 2.723453949661856E-5 2.723453949661856E-5 0.0 6.568807519347416 5.991598689256083E-4 88-89 2.723453949661856E-5 2.723453949661856E-5 0.0 7.163296664749355 5.991598689256083E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3560 0.0 48.25116 1 GTATCAA 6160 0.0 43.214687 1 TCAACGC 7430 0.0 35.193245 4 CAACGCA 7590 0.0 34.19846 5 ATCAACG 7805 0.0 33.25732 3 TATCAAC 7965 0.0 32.827568 2 AACGCAG 8110 0.0 32.172916 6 GTACATG 15250 0.0 31.986923 1 TACATGG 15830 0.0 30.1871 2 ACATGGG 16445 0.0 28.538773 3 CATGGGG 13405 0.0 26.728628 4 ACGCAGA 9675 0.0 26.678513 7 ATGGGGG 9280 0.0 26.385342 5 CGCAGAG 10215 0.0 24.807425 8 GAGTACA 10985 0.0 21.468689 1 GCAGAGT 11760 0.0 20.740952 9 TGGGGGG 9790 0.0 19.964714 6 AGTACAT 11165 0.0 19.933655 2 GTATAGG 1350 0.0 19.33206 1 GTATAGT 990 0.0 18.692982 1 >>END_MODULE