##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921371_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3671808 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.444768081555463 33.0 31.0 34.0 30.0 34.0 2 31.568445027626716 34.0 31.0 34.0 29.0 34.0 3 31.648207912832042 34.0 31.0 34.0 28.0 34.0 4 35.145188691783446 37.0 35.0 37.0 33.0 37.0 5 34.89347591159451 37.0 35.0 37.0 32.0 37.0 6 34.848127135187895 37.0 35.0 37.0 32.0 37.0 7 34.71693046041623 37.0 35.0 37.0 32.0 37.0 8 34.68114590959004 37.0 35.0 37.0 32.0 37.0 9 36.303484005699644 39.0 37.0 39.0 32.0 39.0 10-11 36.15387174383846 39.0 37.0 39.0 32.0 39.0 12-13 36.069590376185246 39.0 37.0 39.0 32.0 39.0 14-15 37.30106081254793 40.0 38.0 41.0 32.0 41.0 16-17 37.276801782664016 40.0 38.0 41.0 31.5 41.0 18-19 37.24006252505578 40.0 38.0 41.0 31.0 41.0 20-21 37.19926559340793 40.0 38.0 41.0 31.0 41.0 22-23 37.096693100510706 40.0 37.5 41.0 31.0 41.0 24-25 37.02616803492993 40.0 37.0 41.0 31.0 41.0 26-27 36.88750936868159 40.0 37.0 41.0 30.0 41.0 28-29 36.74248313092623 40.0 37.0 41.0 30.0 41.0 30-31 36.60258883362093 40.0 37.0 41.0 30.0 41.0 32-33 36.561010270689536 40.0 36.5 41.0 30.0 41.0 34-35 36.70229516358154 40.0 37.0 41.0 30.0 41.0 36-37 36.6918494921303 40.0 37.0 41.0 30.0 41.0 38-39 36.6150775040525 40.0 37.0 41.0 30.0 41.0 40-41 36.501277436075085 40.0 37.0 41.0 30.0 41.0 42-43 36.40549859905529 40.0 36.5 41.0 30.0 41.0 44-45 36.28617604733145 40.0 36.0 41.0 29.0 41.0 46-47 36.14139846092171 40.0 36.0 41.0 29.0 41.0 48-49 35.996311353970576 40.0 35.5 41.0 28.0 41.0 50-51 35.84334529474308 40.0 35.0 41.0 28.0 41.0 52-53 35.67080495494318 39.0 35.0 41.0 28.0 41.0 54-55 35.46353254309594 39.0 35.0 41.0 27.0 41.0 56-57 35.21040955845186 39.0 35.0 41.0 27.0 41.0 58-59 34.982381431708845 38.5 35.0 40.5 26.0 41.0 60-61 34.697418955457366 38.0 34.5 40.0 26.0 41.0 62-63 34.3854362755351 37.5 34.0 40.0 26.0 41.0 64-65 34.073081707976016 37.0 34.0 40.0 26.0 41.0 66-67 33.74155143733006 36.5 34.0 39.0 25.5 41.0 68-69 33.37158356319284 36.0 34.0 39.0 24.5 41.0 70-71 32.99141172414244 35.0 33.5 38.5 24.0 40.0 72-73 32.59370846732727 35.0 33.0 37.5 22.5 39.5 74-75 32.188389207714565 35.0 33.0 37.0 22.0 39.0 76-77 29.44779724321097 33.0 29.0 34.5 16.5 36.5 78-79 31.117918611212787 34.5 31.5 36.0 19.5 37.0 80-81 31.32138744727393 35.0 32.0 35.5 20.0 37.0 82-83 31.1673842967824 35.0 32.0 35.0 20.0 37.0 84-85 30.95063263111797 35.0 32.0 35.0 19.0 36.0 86-87 30.720657507146342 35.0 32.0 35.0 18.0 36.0 88-89 30.45911087943596 35.0 32.0 35.0 12.0 36.0 90-91 30.28518389305759 35.0 32.0 35.0 8.5 35.0 92-93 30.14418237554905 34.0 32.0 35.0 6.0 35.0 94-95 30.051991416762533 34.0 32.0 35.0 2.0 35.0 96-97 29.869570386033256 34.0 31.5 35.0 2.0 35.0 98-99 29.62337968107265 34.0 31.0 35.0 2.0 35.0 100-101 28.54681658191278 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 64888.0 3 22730.0 4 12770.0 5 8784.0 6 7750.0 7 7413.0 8 7794.0 9 8449.0 10 9415.0 11 10138.0 12 10743.0 13 11330.0 14 12461.0 15 13310.0 16 14092.0 17 15133.0 18 14428.0 19 12979.0 20 12863.0 21 12641.0 22 13424.0 23 15269.0 24 18299.0 25 21937.0 26 26394.0 27 32368.0 28 38499.0 29 46459.0 30 56993.0 31 70818.0 32 90472.0 33 120396.0 34 182218.0 35 264255.0 36 451918.0 37 894997.0 38 926250.0 39 110729.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.95823422123049 18.807065318933 13.038529548703421 26.196170911133095 2 15.286591591628396 20.424136110069384 38.078835054154744 26.210437244147478 3 18.42765962894105 24.66225399327695 28.34530739911743 28.564778978664574 4 13.330302899901461 15.85944381287718 34.699624854492896 36.11062843272846 5 14.147318181446703 38.14338991454249 33.5287114903169 14.180580413693905 6 34.54863309756142 34.34731324328954 16.812195974202083 14.291857684946956 7 29.784130458050424 31.829257631336777 20.098148020549043 18.28846389006376 8 27.681024034860762 35.15310138217471 19.104786545924966 18.061088037039557 9 27.99095159659764 15.266893040158964 18.4616679303493 38.28048743289409 10-11 26.530309306680156 25.241896097371008 26.860461613473042 21.367332982475798 12-13 26.736573342774662 22.25638651342666 27.170066452421153 23.836973691377526 14-15 23.924304668778454 23.919660933810164 24.23893473536907 27.917099662042315 16-17 24.27081873731636 27.064743199294405 25.0318474026341 23.632590660755135 18-19 24.325702614532613 26.730338374588946 26.224156603151556 22.71980240772688 20-21 24.54211706007152 25.715536563910245 26.43296593759447 23.309380438423766 22-23 24.53622895140559 25.268839460526323 26.015203438312696 24.17972814975539 24-25 24.29951327030527 25.541209839829804 25.928341263928473 24.230935625936457 26-27 23.916374171452695 25.960883375264267 26.09564338166455 24.027099071618487 28-29 23.997482821043477 26.53709087160385 25.62136557094573 23.84406073640694 30-31 24.87531915015321 25.81391715980844 25.59512387186626 23.71563981817209 32-33 24.42572184325767 25.80282360747438 25.604703669937933 24.166750879330017 34-35 24.549957931338607 26.090700524244433 25.86360601833807 23.495735526078892 36-37 24.407709012017467 26.097706548634918 25.98894460058274 23.50563983876487 38-39 24.547589118744334 26.13213871505274 25.705168349968904 23.615103816234026 40-41 24.637065590270492 25.817629723219998 25.66531336384381 23.879991322665695 42-43 24.24187826663905 25.86465200859106 25.507426613952394 24.3860431108175 44-45 23.94832751329222 25.905928597750954 25.893712912047878 24.25203097690895 46-47 24.18402089520977 25.613437257377065 25.704272969076232 24.498268878336933 48-49 23.923632447343994 25.97810739079844 25.887487416162223 24.210772745695348 50-51 24.211125797439966 25.745718547780218 25.968537362392834 24.074618292386983 52-53 24.416125472816933 25.67153724109541 25.85658557031557 24.055751715772082 54-55 23.530890453891015 25.485504484413323 26.401301714280578 24.582303347415085 56-57 23.872897296042957 25.621584918980428 25.8500831521671 24.65543463280951 58-59 24.06153444721899 25.69213383623789 26.080275159391107 24.166056557152007 60-61 24.48643664348513 25.74830891275936 26.039727051008864 23.725527392746645 62-63 24.22922266616256 25.637863086476116 26.16449442193266 23.968419825428665 64-65 23.773502661012724 25.301538306459854 26.305830526113617 24.61912850641381 66-67 23.939927800351803 25.734184821128036 25.867394956540856 24.458492421979305 68-69 23.74474968546126 25.68062205730741 26.064293257300115 24.510334999931217 70-71 23.77390840467507 25.4206397080179 26.056653267443373 24.748798619863656 72-73 23.688946229013563 26.012065761834414 25.69478515114756 24.604202858004463 74-75 23.585060497686484 25.873107476575047 25.87528676351509 24.666545262223384 76-77 23.473814999449253 25.28099449810814 26.054950126180852 25.19024037626176 78-79 23.363417524920497 25.393657601620333 26.28006341144758 24.96286146201159 80-81 23.784390248554637 25.735619397438768 25.66504560388619 24.814944750120404 82-83 23.750519263483486 25.76037199014455 25.87803539299903 24.61107335337293 84-85 23.643198663348286 25.818377026829882 25.66010868059448 24.87831562922735 86-87 23.240331088138262 26.139192100460306 25.732132382923144 24.88834442847829 88-89 23.15506419583929 25.654593864144175 25.975948506802677 25.214393433213857 90-91 23.511420684119557 25.314764963245608 26.129463606980885 25.044350745653954 92-93 23.67387026707268 25.241012007241974 25.949255768436647 25.1358619572487 94-95 23.474267016430485 25.341221948183367 25.931111344432246 25.2533996909539 96-97 23.01979506976069 25.16184025116 26.166499316549658 25.65186536252965 98-99 22.64142104916272 25.10764574866699 26.175864692902547 26.075068509267744 100-101 22.799612284238467 25.341906692209353 26.14116873588212 25.71731228767006 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 77.5 2 109.5 3 152.0 4 135.0 5 123.0 6 212.5 7 457.5 8 678.0 9 741.5 10 598.0 11 457.0 12 467.5 13 489.5 14 517.0 15 574.0 16 664.5 17 718.0 18 777.5 19 849.5 20 933.5 21 1062.0 22 1232.0 23 1461.5 24 1703.5 25 2148.5 26 2865.5 27 3879.0 28 5489.5 29 8127.0 30 12210.5 31 17777.5 32 25778.0 33 32911.5 34 39717.5 35 48487.0 36 60256.5 37 72230.5 38 81672.0 39 91298.0 40 98118.0 41 103246.5 42 109015.5 43 116820.0 44 126195.0 45 136248.5 46 143962.5 47 150206.5 48 158806.5 49 165925.5 50 169994.5 51 170896.5 52 169400.5 53 167689.5 54 164739.5 55 156833.0 56 144509.5 57 130297.0 58 115341.0 59 98456.0 60 80440.5 61 65899.5 62 54312.5 63 42071.5 64 30229.5 65 21734.5 66 15938.0 67 11877.0 68 8962.5 69 6651.0 70 4939.5 71 3591.0 72 2574.5 73 1848.0 74 1340.0 75 977.0 76 667.0 77 391.5 78 211.0 79 121.5 80 81.0 81 53.0 82 33.5 83 17.5 84 15.5 85 11.5 86 7.0 87 6.0 88 4.5 89 5.0 90 4.0 91 2.5 92 2.5 93 2.0 94 1.0 95 1.5 96 1.5 97 1.5 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14992613992888518 2 4.0851809244927834E-4 3 0.007135449348114063 4 0.004520933556438681 5 0.026635379627692954 6 0.0010621470403681238 7 1.9064177647632992E-4 8 0.0015796032908038764 9 0.0 10-11 0.09947415551139929 12-13 2.1787631597294847E-4 14-15 0.00529711793209231 16-17 4.085180924492784E-5 18-19 1.2255542773478351E-4 20-21 4.902217109391341E-4 22-23 1.9064177647632992E-4 24-25 0.0015659860210555673 26-27 0.0026008985219270727 28-29 0.006468203130446908 30-31 0.01455686136094262 32-33 0.014897293104650352 34-35 0.011683617444049362 36-37 7.489498361570103E-4 38-39 2.0425904622463917E-4 40-41 0.00472519260266332 42-43 0.008619731750679774 44-45 0.008143127309488948 46-47 0.009382298856585094 48-49 0.011765321062539217 50-51 0.00585542599177299 52-53 0.0017566277975318973 54-55 9.395916126333404E-4 56-57 0.006155005926235794 58-59 0.009150805270863836 60-61 0.007612053789304888 62-63 0.017539043435822355 64-65 0.03303549640939831 66-67 0.03517340775988287 68-69 0.02604983702851565 70-71 0.03938114411211044 72-73 0.025191949034372167 74-75 0.02403448110576588 76-77 0.23458470595412395 78-79 0.06642504183225267 80-81 0.051486896918357394 82-83 0.02023526284598759 84-85 0.03114269591438332 86-87 0.07996060796207209 88-89 0.2587008906783797 90-91 0.31312911786237185 92-93 0.04941707191661438 94-95 0.00510647615561598 96-97 0.009899755107020847 98-99 0.0011438506588579795 100-101 0.0012527888168444537 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3671808.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.05061336861091 #Duplication Level Percentage of deduplicated Percentage of total 1 72.98433004797732 36.529104851984044 2 13.906405467187533 13.920482467706801 3 5.03059733299578 7.5535344638081074 4 2.4664151957254394 4.9378237347088305 5 1.384061065191924 3.4636552626234387 6 0.8571041409760118 2.5739152785975445 7 0.6069490396732493 2.126472020339484 8 0.44001036074096606 1.7618230754903283 9 0.31961449895587507 1.439721154281852 >10 1.842348094266641 16.771139920334697 >50 0.11583070944105368 3.9481654794932894 >100 0.043657404562452214 3.7574085006703317 >500 0.0017480113083578274 0.602772131089471 >1k 9.286309973853521E-4 0.6139816588717136 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.723453949661856E-5 2 0.0 0.0 0.0 0.0 2.723453949661856E-5 3 0.0 0.0 0.0 0.0 2.723453949661856E-5 4 0.0 0.0 0.0 2.723453949661856E-5 2.723453949661856E-5 5 0.0 0.0 0.0 2.723453949661856E-5 2.723453949661856E-5 6 0.0 0.0 0.0 2.723453949661856E-5 2.723453949661856E-5 7 0.0 0.0 0.0 2.723453949661856E-5 2.723453949661856E-5 8 0.0 0.0 0.0 2.723453949661856E-5 2.723453949661856E-5 9 0.0 0.0 0.0 2.723453949661856E-5 2.723453949661856E-5 10-11 0.0 0.0 0.0 6.808634874154641E-5 5.446907899323712E-5 12-13 0.0 0.0 0.0 8.170361848985568E-5 5.446907899323712E-5 14-15 0.0 0.0 0.0 8.170361848985568E-5 5.446907899323712E-5 16-17 0.0 0.0 0.0 1.0893815798647424E-4 5.446907899323712E-5 18-19 0.0 0.0 0.0 1.9064177647632992E-4 5.446907899323712E-5 20-21 0.0 0.0 0.0 2.042590462246392E-4 5.446907899323712E-5 22-23 0.0 0.0 0.0 2.859626647144949E-4 9.532088823816496E-5 24-25 0.0 0.0 0.0 5.446907899323712E-4 1.361726974830928E-4 26-27 0.0 0.0 0.0 9.532088823816496E-4 1.361726974830928E-4 28-29 0.0 0.0 0.0 0.0025600467126821445 1.361726974830928E-4 30-31 0.0 0.0 0.0 0.010662322212926166 1.361726974830928E-4 32-33 0.0 0.0 0.0 0.028296686536986686 1.361726974830928E-4 34-35 0.0 0.0 0.0 0.05160945234609217 1.6340723697971137E-4 36-37 0.0 0.0 0.0 0.08919311685142578 1.6340723697971137E-4 38-39 1.361726974830928E-5 0.0 0.0 0.15205043400962143 1.6340723697971137E-4 40-41 2.723453949661856E-5 0.0 0.0 0.22561092518998815 1.6340723697971137E-4 42-43 2.723453949661856E-5 0.0 0.0 0.30310680732761625 1.6340723697971137E-4 44-45 2.723453949661856E-5 0.0 0.0 0.39834599194729137 1.6340723697971137E-4 46-47 2.723453949661856E-5 0.0 0.0 0.5046015477933486 1.6340723697971137E-4 48-49 2.723453949661856E-5 0.0 0.0 0.6169304059471519 1.6340723697971137E-4 50-51 2.723453949661856E-5 0.0 0.0 0.7449191243115109 1.9064177647632992E-4 52-53 2.723453949661856E-5 0.0 0.0 0.8791854040298404 1.9064177647632992E-4 54-55 2.723453949661856E-5 0.0 0.0 1.0363967832740708 1.9064177647632992E-4 56-57 2.723453949661856E-5 0.0 0.0 1.2099216516767761 1.9064177647632992E-4 58-59 2.723453949661856E-5 0.0 0.0 1.3985753067698528 1.9064177647632992E-4 60-61 2.723453949661856E-5 0.0 0.0 1.6047135362197587 1.9064177647632992E-4 62-63 2.723453949661856E-5 0.0 0.0 1.8266886503869484 1.9064177647632992E-4 64-65 2.723453949661856E-5 0.0 0.0 2.069130520985847 1.9064177647632992E-4 66-67 2.723453949661856E-5 2.723453949661856E-5 0.0 2.3480939090497106 1.9064177647632992E-4 68-69 2.723453949661856E-5 2.723453949661856E-5 0.0 2.6527667023983827 1.9064177647632992E-4 70-71 2.723453949661856E-5 2.723453949661856E-5 0.0 2.978083276685491 2.4511085546956703E-4 72-73 2.723453949661856E-5 2.723453949661856E-5 0.0 3.3249968407934185 2.723453949661856E-4 74-75 2.723453949661856E-5 2.723453949661856E-5 0.0 3.6886324121522693 2.723453949661856E-4 76-77 2.723453949661856E-5 2.723453949661856E-5 0.0 4.091213374991285 2.723453949661856E-4 78-79 2.723453949661856E-5 2.723453949661856E-5 0.0 4.54824979955379 2.723453949661856E-4 80-81 2.723453949661856E-5 2.723453949661856E-5 0.0 5.028667076274141 2.723453949661856E-4 82-83 2.723453949661856E-5 2.723453949661856E-5 0.0 5.518534738199818 2.9957993446280413E-4 84-85 2.723453949661856E-5 2.723453949661856E-5 0.0 6.036372272188524 2.9957993446280413E-4 86-87 2.723453949661856E-5 2.723453949661856E-5 0.0 6.588007869692532 2.9957993446280413E-4 88-89 2.723453949661856E-5 2.723453949661856E-5 0.0 7.188338823816496 2.9957993446280413E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3395 0.0 49.274197 1 GTATCAA 5970 0.0 42.74808 1 TCAACGC 7840 0.0 31.957842 4 TATCAAC 8085 0.0 31.28288 2 ATCAACG 8205 0.0 30.651861 3 CAACGCA 8210 0.0 30.51633 5 AACGCAG 8645 0.0 29.144192 6 GTACATG 14930 0.0 29.030313 1 TACATGG 15460 0.0 27.348139 2 ACATGGG 15885 0.0 26.10861 3 CATGGGG 13010 0.0 23.853933 4 ACGCAGA 10755 0.0 23.07222 7 ATGGGGG 9425 0.0 22.294912 5 CCCTATA 790 0.0 22.224611 2 CGCAGAG 11160 0.0 22.021944 8 GAGTACA 11065 0.0 20.2725 1 TGGGGGG 8405 0.0 19.739166 6 GTATAAA 1205 0.0 19.71967 1 GTAAGTA 3155 0.0 19.251747 2 GCAGAGT 12385 0.0 18.577131 9 >>END_MODULE