##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921370_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3035979 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.311636542940516 33.0 31.0 34.0 28.0 34.0 2 31.457099011554426 34.0 31.0 34.0 28.0 34.0 3 31.528691074608883 34.0 31.0 34.0 28.0 34.0 4 35.01665525354424 37.0 35.0 37.0 32.0 37.0 5 34.74653612557926 37.0 35.0 37.0 32.0 37.0 6 34.69458418520023 37.0 35.0 37.0 32.0 37.0 7 34.5589989258819 37.0 35.0 37.0 31.0 37.0 8 34.517826045568825 37.0 35.0 37.0 31.0 37.0 9 36.124907319846415 39.0 37.0 39.0 32.0 39.0 10-11 35.97774671695687 39.0 37.0 39.0 31.0 39.0 12-13 35.904433462813806 39.0 37.0 39.0 30.5 39.0 14-15 37.12878893431081 40.0 38.0 41.0 31.0 41.0 16-17 37.09924591046249 40.0 38.0 41.0 31.0 41.0 18-19 37.05604370122455 40.0 38.0 41.0 31.0 41.0 20-21 37.01474516128076 40.0 38.0 41.0 31.0 41.0 22-23 36.899155099557674 40.0 37.0 41.0 30.0 41.0 24-25 36.8255674693402 40.0 37.0 41.0 30.0 41.0 26-27 36.683689511686346 40.0 37.0 41.0 30.0 41.0 28-29 36.52639165158916 40.0 37.0 41.0 30.0 41.0 30-31 36.388118791335515 40.0 36.5 41.0 29.5 41.0 32-33 36.33395306752781 40.0 36.5 41.0 29.5 41.0 34-35 36.46233224933374 40.0 37.0 41.0 30.0 41.0 36-37 36.429191703895185 40.0 37.0 41.0 30.0 41.0 38-39 36.33333333333333 40.0 37.0 41.0 29.0 41.0 40-41 36.207046721996434 40.0 36.0 41.0 28.5 41.0 42-43 36.09775989886623 40.0 36.0 41.0 28.0 41.0 44-45 35.9540370667913 40.0 36.0 41.0 28.0 41.0 46-47 35.79860993768402 40.0 35.5 41.0 27.0 41.0 48-49 35.63316379988136 40.0 35.0 41.0 27.0 41.0 50-51 35.47113781090054 39.0 35.0 41.0 26.5 41.0 52-53 35.28716815893654 39.0 35.0 41.0 26.0 41.0 54-55 35.07125148098851 39.0 35.0 41.0 26.0 41.0 56-57 34.79744326294747 39.0 35.0 41.0 25.0 41.0 58-59 34.56063908874205 38.0 34.5 40.0 24.5 41.0 60-61 34.27623840612863 38.0 34.0 40.0 23.5 41.0 62-63 33.97413634942798 37.0 34.0 40.0 23.0 41.0 64-65 33.65255968503076 37.0 34.0 40.0 23.0 41.0 66-67 33.31206408212968 36.0 34.0 39.0 22.0 41.0 68-69 32.949372179451835 35.5 33.0 39.0 22.0 40.5 70-71 32.56762513838205 35.0 33.0 38.5 20.5 40.0 72-73 32.17726028407969 35.0 33.0 37.0 20.0 39.5 74-75 31.778224421183413 35.0 32.5 37.0 18.0 39.0 76-77 29.047243903860995 32.0 28.5 34.5 11.0 36.5 78-79 30.701744807852755 34.5 31.5 35.5 12.0 37.0 80-81 30.907168824290288 35.0 32.0 35.0 13.0 37.0 82-83 30.76006685158231 35.0 32.0 35.0 11.0 37.0 84-85 30.537402267934 35.0 32.0 35.0 7.5 36.0 86-87 30.30231944950871 35.0 32.0 35.0 4.0 36.0 88-89 30.033864529365978 35.0 31.0 35.0 2.0 35.5 90-91 29.857167160905924 34.0 31.0 35.0 2.0 35.0 92-93 29.71966884487673 34.0 31.0 35.0 2.0 35.0 94-95 29.617448934923463 34.0 31.0 35.0 2.0 35.0 96-97 29.42484780033063 34.0 31.0 35.0 2.0 35.0 98-99 29.158588547549243 34.0 31.0 35.0 2.0 35.0 100-101 28.07300379877463 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61137.0 3 20658.0 4 11429.0 5 8220.0 6 7236.0 7 7342.0 8 7372.0 9 8021.0 10 8649.0 11 9444.0 12 9959.0 13 10533.0 14 11488.0 15 12307.0 16 13383.0 17 14043.0 18 13439.0 19 11940.0 20 11545.0 21 11196.0 22 11883.0 23 13552.0 24 15965.0 25 18911.0 26 22870.0 27 27760.0 28 32825.0 29 39932.0 30 48373.0 31 60323.0 32 76497.0 33 100955.0 34 146062.0 35 219460.0 36 385652.0 37 729237.0 38 730125.0 39 86253.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.63474858083259 19.58307535037577 13.942031270668187 25.840144798123454 2 15.28191337985117 20.943699011320277 37.24248740434682 26.531900204481733 3 18.04552663955689 24.358250941677742 28.865819774326745 28.730402644438623 4 13.490622252629159 16.793544623478642 34.600905115096005 35.1149280087962 5 14.706271901443996 36.98373873381154 33.71922925367391 14.59076011107055 6 34.11163051755896 34.86283014442954 16.641940694558265 14.383598643453238 7 29.35821276525663 31.569660487981622 20.537487956916642 18.534638789845108 8 27.065457809399113 34.58089379678352 19.543466982880012 18.810181410937357 9 26.86553497240923 15.55218267320031 19.129249576495752 38.453032777894705 10-11 26.024895343481425 25.237230783737775 27.252171682519418 21.485702190261378 12-13 26.40131832594608 22.553884316766478 27.259297394590163 23.78549996269728 14-15 23.739614236847856 24.203886486925388 24.37863296864956 27.677866307577194 16-17 23.945352032417894 27.243400189889417 25.22375412861261 23.587493649080074 18-19 24.020178048384825 26.598346987662108 26.55885387631146 22.822621087641604 20-21 24.518138493567356 25.65454985333307 26.438601556245544 23.388710096854027 22-23 24.402872162295385 25.408234368548705 26.15720409668012 24.031689372475785 24-25 24.152229314678554 25.73607520324065 26.055861575337797 24.055833906743 26-27 24.015495344923934 25.841967706557522 26.150856778076996 23.991680170441548 28-29 24.08901117959676 26.1286860082678 25.895136084006822 23.887166728128616 30-31 24.44764435764927 25.76530250874733 25.797784812315864 23.98926832128754 32-33 24.240027356247925 25.763118744037232 25.688468867113993 24.308385032600846 34-35 24.49459773789694 25.858698360947898 25.82593741357838 23.820766487576783 36-37 24.46003497081072 25.80470002821183 25.849232886923268 23.886032114054185 38-39 24.415549038873586 25.795009764592457 25.8113966249326 23.978044571601355 40-41 24.454635740320143 25.636509471097547 25.819409285480177 24.089445503102134 42-43 24.390945706322466 25.609531938106507 25.61229898169502 24.38722337387601 44-45 24.282680181274504 25.652318925199975 25.725826840518458 24.339174053007063 46-47 24.431785333750813 25.64756286955386 25.553629750000866 24.367022046694462 48-49 24.157847568495118 25.75896458014307 25.684333522916976 24.398854328444845 50-51 24.33389485806293 25.727473184833432 25.714066425059507 24.22456553204413 52-53 24.539743523865614 25.597002683868723 25.64425366182727 24.219000130438392 54-55 23.997465047230623 25.467447794004784 25.89551752101646 24.639569637748135 56-57 24.11730631862634 25.61156882822643 25.694232961989815 24.576891891157405 58-59 24.198606745237296 25.54776949943135 25.779857841566887 24.473765913764463 60-61 24.21622835977954 25.502729388272137 25.874498703534393 24.40654354841393 62-63 24.170821898244746 25.567147724186075 25.8773837846065 24.384646592962678 64-65 23.986189722127218 25.314103590593167 25.876511456725005 24.823195230554607 66-67 23.999099143923125 25.588645523018783 25.651728513478737 24.76052681957935 68-69 24.015369725923026 25.465428412577477 25.721376356485393 24.797825505014107 70-71 23.956078392089285 25.30023275236134 25.77629840543132 24.967390450118057 72-73 23.95327962034873 25.538015288251394 25.562066370113534 24.946638721286345 74-75 23.88076223792697 25.621263380091204 25.572799441495114 24.92517494048671 76-77 23.877437351655793 25.241733581480236 25.7735193972896 25.107309669574366 78-79 23.8116787767822 25.32987361423088 25.76985891399538 25.088588694991536 80-81 23.9319750354767 25.500167084873183 25.557905289570936 25.009952590079177 82-83 23.835994850748296 25.567319547636757 25.54788219315953 25.048803408455413 84-85 23.76712782372069 25.57312951002077 25.55625991953337 25.103482746725174 86-87 23.56585224748871 25.71214772119487 25.524793126210938 25.197206905105485 88-89 23.535572660456417 25.492584158049635 25.555164406072166 25.41667877542178 90-91 23.541296050075204 25.38519895007018 25.6397183798515 25.43378662000312 92-93 23.569051697220004 25.356411669669683 25.660602135973683 25.41393449713663 94-95 23.42268376068939 25.34370257691701 25.67244222927647 25.561171433117124 96-97 23.23927272415826 25.261221974813257 25.757353901566514 25.742151399461967 98-99 23.134298614990566 25.25438612671677 25.664325598431585 25.946989659861075 100-101 23.0660026219227 25.272337397972294 25.628668550761873 26.032991429343138 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 46.5 2 66.5 3 89.5 4 78.0 5 89.5 6 178.0 7 354.0 8 489.5 9 499.5 10 445.0 11 358.5 12 344.0 13 384.0 14 423.5 15 464.5 16 522.0 17 566.0 18 609.5 19 708.0 20 818.5 21 915.0 22 1049.5 23 1223.0 24 1454.5 25 1832.0 26 2415.0 27 3367.0 28 4854.0 29 7087.5 30 10441.0 31 15338.0 32 22074.0 33 27866.0 34 32957.0 35 39339.5 36 47661.0 37 56593.5 38 64648.0 39 72323.0 40 78771.5 41 84914.5 42 91890.0 43 99727.5 44 107303.5 45 115629.5 46 121861.0 47 126655.0 48 132708.0 49 135979.0 50 135524.5 51 134128.0 52 133390.0 53 132776.0 54 130872.5 55 124753.0 56 114906.0 57 103938.5 58 94067.5 59 83626.0 60 69984.0 61 57611.5 62 48181.0 63 37740.0 64 27582.5 65 20691.5 66 16006.5 67 12538.0 68 9892.5 69 7680.5 70 5944.5 71 4563.5 72 3401.0 73 2655.0 74 2151.0 75 1659.0 76 1214.0 77 793.5 78 470.5 79 269.5 80 171.5 81 117.5 82 77.0 83 45.0 84 25.5 85 23.5 86 19.0 87 14.5 88 14.0 89 8.5 90 3.0 91 3.0 92 2.5 93 2.0 94 1.5 95 1.5 96 1.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1465095773060354 2 3.6232134675503357E-4 3 0.005731264939579621 4 0.0040184731185558265 5 0.02605419866211196 6 0.001152840648766016 7 1.3175321700183037E-4 8 0.0017786684295247102 9 0.0 10-11 0.0975632571898554 12-13 2.4703728187843197E-4 14-15 0.005023091398194784 16-17 4.94074563756864E-5 18-19 2.1409897762797437E-4 20-21 6.093586286334655E-4 22-23 2.799755861288896E-4 24-25 0.0015151619955210494 26-27 0.0032773612729205303 28-29 0.007427587608478187 30-31 0.015810386040219646 32-33 0.015645694518967357 34-35 0.011610752248286303 36-37 6.093586286334655E-4 38-39 3.2938304250457596E-4 40-41 0.005401881897075046 42-43 0.008168699454113483 44-45 0.008283983518990085 46-47 0.010161466861266167 48-49 0.012500086463048657 50-51 0.0064888459373401465 52-53 0.0020751131677788285 54-55 8.234576062614398E-4 56-57 0.006604130002216748 58-59 0.009272132646503813 60-61 0.007427587608478187 62-63 0.01806665988137599 64-65 0.03270773612070439 66-67 0.035836875024497866 68-69 0.026070667814237187 70-71 0.039805940686678004 72-73 0.02544484003347849 74-75 0.02412730786346019 76-77 0.23478423269726176 78-79 0.0663377447604216 80-81 0.052470718670978946 82-83 0.019318315442893377 84-85 0.03069849956142648 86-87 0.07992479526373536 88-89 0.2591256395383499 90-91 0.31261744564109306 92-93 0.05044501295957581 94-95 0.004677239203564979 96-97 0.009700330601759762 98-99 0.0014163470827696766 100-101 0.0012845938657678462 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3035979.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.14291663141916 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76484070874163 46.58382407524117 2 11.610011090818764 13.732998360682922 3 3.843531921568076 6.81953064022497 4 1.7336075920281655 4.101224371476684 5 0.9890861590560833 2.9248720123172265 6 0.6510380601090447 2.3102573827746054 7 0.45579405290102315 1.8869892770275307 8 0.3102792409700119 1.4680655424919546 9 0.2551944745011376 1.3583650977197643 >10 1.3030557659219975 13.601344909692495 >50 0.06175545702092109 2.4454103154472846 >100 0.020183705611412438 2.021352615628342 >500 0.0012303088464767316 0.4700227112001201 >1k 3.914619053218185E-4 0.27574268807512353 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.587660850091519E-5 2 0.0 0.0 0.0 0.0 6.587660850091519E-5 3 0.0 0.0 0.0 0.0 6.587660850091519E-5 4 0.0 0.0 0.0 0.0 6.587660850091519E-5 5 0.0 0.0 0.0 0.0 6.587660850091519E-5 6 0.0 0.0 0.0 0.0 9.881491275137278E-5 7 0.0 0.0 0.0 0.0 9.881491275137278E-5 8 0.0 0.0 0.0 0.0 9.881491275137278E-5 9 0.0 0.0 0.0 0.0 1.3175321700183037E-4 10-11 0.0 0.0 0.0 0.0 1.3175321700183037E-4 12-13 0.0 0.0 0.0 0.0 2.799755861288896E-4 14-15 0.0 0.0 0.0 0.0 3.7879049888026235E-4 16-17 0.0 0.0 0.0 0.0 4.2819795525594873E-4 18-19 0.0 0.0 0.0 0.0 4.6113625950640634E-4 20-21 0.0 0.0 0.0 0.0 4.776054116316351E-4 22-23 0.0 0.0 0.0 1.6469152125228797E-5 5.105437158820928E-4 24-25 0.0 0.0 0.0 2.9644473825411836E-4 5.270128680073215E-4 26-27 0.0 0.0 0.0 6.752352371343806E-4 5.434820201325503E-4 28-29 0.0 0.0 0.0 0.002437434514533862 5.928894765082367E-4 30-31 0.0 0.0 0.0 0.010079121100640024 5.928894765082367E-4 32-33 0.0 0.0 0.0 0.029216275870155888 6.258277807586943E-4 34-35 0.0 0.0 0.0 0.056044524682153596 6.258277807586943E-4 36-37 0.0 0.0 0.0 0.09871609783862141 6.258277807586943E-4 38-39 0.0 0.0 0.0 0.16492208938204117 6.917043892596095E-4 40-41 0.0 0.0 0.0 0.2412236711782262 7.246426935100671E-4 42-43 0.0 0.0 0.0 0.32435995110638116 7.740501498857535E-4 44-45 0.0 0.0 0.0 0.4323317124393812 8.234576062614399E-4 46-47 0.0 0.0 0.0 0.5541375615575734 8.563959105118975E-4 48-49 0.0 0.0 0.0 0.6829263311768625 9.552108232632702E-4 50-51 0.0 0.0 0.0 0.8163594016954663 0.001054025736014643 52-53 0.0 0.0 0.0 0.9597563092498334 0.0011034331923903294 54-55 0.0 0.0 0.0 1.131611911676596 0.0012022481051417021 56-57 3.2938304250457594E-5 0.0 0.0 1.3334743092755252 0.0012516555615173885 58-59 3.2938304250457594E-5 0.0 0.0 1.543851258523198 0.001301063017893075 60-61 3.2938304250457594E-5 0.0 0.0 1.7676176284486815 0.0013669396263939902 62-63 3.2938304250457594E-5 0.0 0.0 1.9959953609692294 0.0014822236912705917 64-65 3.2938304250457594E-5 0.0 0.0 2.2590571278655087 0.0015151619955210494 66-67 3.2938304250457594E-5 0.0 0.0 2.5741614154775116 0.0015481002997715068 68-69 3.2938304250457594E-5 0.0 0.0 2.910263872049181 0.0015810386040219645 70-71 3.2938304250457594E-5 0.0 0.0 3.2662775335402516 0.0015810386040219645 72-73 3.2938304250457594E-5 0.0 0.0 3.634017231344486 0.0016798535167733375 74-75 3.2938304250457594E-5 0.0 0.0 4.028552239656467 0.0017292609731490239 76-77 4.940745637568639E-5 0.0 0.0 4.482112689185268 0.0017786684295247102 78-79 6.587660850091519E-5 0.0 0.0 4.990186032248577 0.0017786684295247102 80-81 6.587660850091519E-5 0.0 0.0 5.515469639282749 0.0017786684295247102 82-83 6.587660850091519E-5 0.0 0.0 6.056020150337009 0.0018116067337751677 84-85 6.587660850091519E-5 0.0 0.0 6.628965483621593 0.0018116067337751677 86-87 6.587660850091519E-5 0.0 0.0 7.264477125829922 0.0018280758859003966 88-89 6.587660850091519E-5 0.0 0.0 7.949280940349061 0.001877483342276083 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2545 0.0 50.04886 1 GTATCAA 4790 0.0 45.840958 1 TCAACGC 6235 0.0 34.70641 4 TATCAAC 6315 0.0 34.0413 2 CAACGCA 6345 0.0 33.868607 5 ATCAACG 6525 0.0 33.309357 3 AACGCAG 6770 0.0 31.951012 6 GTACATG 9210 0.0 26.008669 1 ACGCAGA 8270 0.0 25.350573 7 TACATGG 9535 0.0 25.133444 2 CGCAGAG 8675 0.0 23.783455 8 ACATGGG 10010 0.0 23.134869 3 CATGGGG 8690 0.0 20.42364 4 GCAGAGT 9625 0.0 20.00364 9 TATACCG 255 2.6528141E-7 18.644484 5 AGAGTAC 7885 0.0 18.388777 10-11 TAACCCG 160 0.0011843432 17.828787 5 GTGGTAT 1490 0.0 17.543798 1 GTATAAA 1010 0.0 17.411156 1 CAGAGTA 8830 0.0 16.770733 10-11 >>END_MODULE