##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921369_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4522977 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.415655883282184 33.0 31.0 34.0 29.0 34.0 2 31.5431409445593 34.0 31.0 34.0 29.0 34.0 3 31.625692105000756 34.0 31.0 34.0 28.0 34.0 4 35.11299150979543 37.0 35.0 37.0 33.0 37.0 5 34.85081684032441 37.0 35.0 37.0 32.0 37.0 6 34.80748453949688 37.0 35.0 37.0 32.0 37.0 7 34.66723996164473 37.0 35.0 37.0 32.0 37.0 8 34.63269214059678 37.0 35.0 37.0 32.0 37.0 9 36.25963718144045 39.0 37.0 39.0 32.0 39.0 10-11 36.10789221346914 39.0 37.0 39.0 32.0 39.0 12-13 36.0340827512499 39.0 37.0 39.0 31.0 39.0 14-15 37.28956415210601 40.0 38.0 41.0 31.0 41.0 16-17 37.26082611076731 40.0 38.0 41.0 31.0 41.0 18-19 37.20938255931878 40.0 38.0 41.0 31.0 41.0 20-21 37.16762974916742 40.0 38.0 41.0 31.0 41.0 22-23 37.05544578272231 40.0 38.0 41.0 31.0 41.0 24-25 36.98950757432549 40.0 37.0 41.0 31.0 41.0 26-27 36.85433133973487 40.0 37.0 41.0 30.0 41.0 28-29 36.706431074047025 40.0 37.0 41.0 30.0 41.0 30-31 36.57725520160726 40.0 37.0 41.0 30.0 41.0 32-33 36.54774134380962 40.0 37.0 41.0 30.0 41.0 34-35 36.69680721347909 40.0 37.0 41.0 30.0 41.0 36-37 36.68413193345887 40.0 37.0 41.0 30.0 41.0 38-39 36.60719532732534 40.0 37.0 41.0 30.0 41.0 40-41 36.48967416814192 40.0 37.0 41.0 30.0 41.0 42-43 36.39586327765983 40.0 37.0 41.0 30.0 41.0 44-45 36.27361160580742 40.0 36.0 41.0 29.0 41.0 46-47 36.133819274340766 40.0 36.0 41.0 28.5 41.0 48-49 35.98451672427253 40.0 36.0 41.0 28.0 41.0 50-51 35.825932234455315 40.0 35.0 41.0 28.0 41.0 52-53 35.65165730447004 39.0 35.0 41.0 28.0 41.0 54-55 35.433795484699566 39.0 35.0 41.0 27.0 41.0 56-57 35.16375774185896 39.0 35.0 41.0 26.5 41.0 58-59 34.925848174775155 38.5 35.0 40.0 26.0 41.0 60-61 34.635359742046 38.0 34.5 40.0 26.0 41.0 62-63 34.3246944435048 37.0 34.0 40.0 26.0 41.0 64-65 33.9999338930974 37.0 34.0 40.0 26.0 41.0 66-67 33.6541779894083 36.0 34.0 39.0 25.0 41.0 68-69 33.286061702281486 36.0 34.0 39.0 24.0 40.5 70-71 32.9057255873731 35.0 33.0 38.5 23.5 40.0 72-73 32.513007030546476 35.0 33.0 37.0 22.5 39.5 74-75 32.11134082707031 35.0 33.0 37.0 21.5 39.0 76-77 29.380890395860956 33.0 29.0 34.5 16.5 36.5 78-79 31.04393433793716 34.5 31.5 35.5 19.5 37.0 80-81 31.25346127119373 35.0 32.0 35.0 20.0 37.0 82-83 31.10834324384139 35.0 32.0 35.0 20.0 37.0 84-85 30.8950086414324 35.0 32.0 35.0 18.5 36.0 86-87 30.670305531069474 35.0 32.0 35.0 17.5 36.0 88-89 30.407158272084956 35.0 32.0 35.0 11.0 35.5 90-91 30.23586976011596 35.0 32.0 35.0 8.5 35.0 92-93 30.10099233314695 34.0 32.0 35.0 4.5 35.0 94-95 30.01445463905742 34.0 32.0 35.0 2.0 35.0 96-97 29.837816221484214 34.0 31.0 35.0 2.0 35.0 98-99 29.584312058186455 34.0 31.0 35.0 2.0 35.0 100-101 28.50072562827536 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 84091.0 3 29150.0 4 16085.0 5 11024.0 6 9765.0 7 9648.0 8 9965.0 9 10673.0 10 11610.0 11 12619.0 12 13036.0 13 14091.0 14 15166.0 15 15907.0 16 16976.0 17 17505.0 18 17060.0 19 15884.0 20 15539.0 21 15352.0 22 16382.0 23 18751.0 24 22019.0 25 26571.0 26 32076.0 27 39166.0 28 47757.0 29 57226.0 30 69547.0 31 87308.0 32 111210.0 33 148484.0 34 215473.0 35 322876.0 36 575254.0 37 1132551.0 38 1113661.0 39 125514.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.038244907520784 18.480411020718872 12.732006219159386 26.749337852600963 2 15.453687004927975 19.911173076527657 37.1951245126801 27.440015405864266 3 18.445365674507933 23.4588565185773 28.29245470125458 29.803323105660184 4 13.291185000653364 15.629780684657609 34.102075349173084 36.97695896551594 5 14.527628918143812 37.072115784389524 33.84909584358739 14.551159453879265 6 35.66640577326152 34.115549246946664 16.04883570790551 14.169209271886304 7 30.364289313373888 31.00488594775425 19.85414012161475 18.776684617257107 8 27.784195716344755 34.89890254355987 18.639690836414495 18.67721090368088 9 27.111353232915675 15.13614045265772 18.288268608986648 39.464237705439956 10-11 26.606097867034578 24.82355862501212 26.895862297604207 21.674481210349104 12-13 26.765119783151096 21.908206231973935 27.002386708718728 24.32428727615624 14-15 23.806174069095526 23.61268510217869 23.891222099177302 28.68991872954848 16-17 24.472837799519894 26.769383153869665 24.72068393151178 24.037095115098662 18-19 24.46864195756653 26.249443810334487 25.78411826319586 23.497795968903127 20-21 24.841726376136776 25.330445832552588 25.915341616657738 23.912486174652894 22-23 24.6229463687971 25.102090133814905 25.678868989450283 24.596094507937714 24-25 24.530909164876146 25.356275998264827 25.568717225106557 24.544097611752466 26-27 24.294134886370532 25.5981727396071 25.647467026499854 24.460225347522513 28-29 24.444839983549503 25.862843990041256 25.41800621757992 24.274309808829315 30-31 24.783217182174962 25.48624937752473 25.312840813503314 24.417692626796995 32-33 24.421756748539174 25.505702329026875 25.370427495010805 24.702113427423143 34-35 24.693005760778547 25.567747246587547 25.514789565634246 24.22445742699966 36-37 24.712325059996882 25.487030735626035 25.54774341090045 24.252900793476638 38-39 24.66137279768506 25.692443545919406 25.401428884750015 24.24475477164552 40-41 24.77963276420493 25.42217545602113 25.496853728645803 24.30133805112814 42-43 24.496257830022333 25.420421301884005 25.344535355012788 24.738785513080874 44-45 24.441176151925703 25.43335340300302 25.554523204569783 24.570947240501493 46-47 24.60807197058981 25.424907474028824 25.3639015821731 24.603118973208264 48-49 24.39476501171829 25.608220117693705 25.428647999509995 24.56836687107801 50-51 24.44477094517872 25.597587550195342 25.525838461071586 24.43180304355435 52-53 24.742665331831056 25.356883542078272 25.430630409135368 24.4698207169553 54-55 24.171027864536207 25.309646799075512 25.7527882058013 24.766537130586983 56-57 24.30051615276919 25.476674069337463 25.556814392843908 24.665995385049435 58-59 24.44043540417903 25.46380570369878 25.53910603438564 24.556652857736548 60-61 24.491334885448154 25.495006076641186 25.659456249786487 24.354202788124166 62-63 24.47994282361896 25.456768654358207 25.605392748179128 24.457895773843706 64-65 24.213798434353542 25.296359247189233 25.628597431578992 24.86124488687823 66-67 24.230634357502762 25.475044613447988 25.510178014762662 24.784143014286588 68-69 24.270577545853353 25.338475704089507 25.593983519099062 24.796963230958077 70-71 24.16438764596598 25.213771201693913 25.592769330591096 25.029071821749007 72-73 24.183289117863787 25.48528283894276 25.38682638491431 24.944601658279144 74-75 24.06774904466952 25.488667340651183 25.544661941993173 24.89892167268612 76-77 24.112781801588813 25.165613768215188 25.558927076310873 25.162677353885133 78-79 23.986207804404806 25.171708299709234 25.69424755486651 25.14783634101945 80-81 24.15909406134756 25.304192766798707 25.47058767576043 25.066125496093306 82-83 24.107631237724735 25.352685611829056 25.56447001985714 24.97521313058907 84-85 24.026188295106866 25.340391218786785 25.481072691251388 25.15234779485496 86-87 23.82883656833634 25.49693356875111 25.482285417023697 25.191944445888854 88-89 23.691199202315556 25.29300782499534 25.55932013273164 25.456472839957467 90-91 23.79333709643256 25.163212415122338 25.649129071715876 25.39432141672923 92-93 23.90506353264395 25.06122105887187 25.65721184128812 25.376503567196064 94-95 23.755258546419643 25.012754942699218 25.65390155317891 25.578084957702234 96-97 23.486725023855453 24.86924137165522 25.80348190694609 25.840551697543233 98-99 23.348143801569204 24.8795636100251 25.72818442570486 26.044108162700834 100-101 23.387770226842743 24.941116488422395 25.759980348947682 25.91113293578718 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 35.0 1 29.0 2 34.5 3 60.5 4 61.0 5 66.5 6 123.0 7 261.5 8 372.0 9 388.0 10 353.5 11 308.0 12 296.5 13 311.5 14 372.5 15 413.0 16 479.5 17 531.0 18 547.0 19 620.5 20 720.5 21 857.0 22 974.0 23 1167.0 24 1482.5 25 1924.5 26 2694.0 27 3802.5 28 5470.5 29 8343.0 30 12509.5 31 18080.0 32 26682.0 33 34245.5 34 40897.0 35 50553.5 36 63132.0 37 76062.0 38 87730.5 39 99250.0 40 109639.0 41 119684.0 42 130012.5 43 141310.0 44 152920.0 45 165450.5 46 175774.5 47 184152.0 48 194384.5 49 201545.5 50 205045.5 51 208072.5 52 209814.0 53 210582.5 54 209320.0 55 201815.0 56 189844.0 57 174079.5 58 156876.0 59 137729.0 60 115476.5 61 95838.0 62 77974.0 63 58848.5 64 41711.5 65 30039.0 66 22186.5 67 16717.5 68 12486.5 69 9085.5 70 6617.5 71 4744.5 72 3286.0 73 2430.5 74 1850.5 75 1309.0 76 866.5 77 513.5 78 285.5 79 154.0 80 85.5 81 56.5 82 39.5 83 29.0 84 23.0 85 15.0 86 10.5 87 5.5 88 3.0 89 1.5 90 2.0 91 2.5 92 1.5 93 1.5 94 1.5 95 1.0 96 1.0 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14616479367460855 2 5.306239673560136E-4 3 0.0061906129524868245 4 0.004864053034096791 5 0.02637643304398851 6 0.0012602319224705321 7 1.326559918390034E-4 8 0.0014149972462827027 9 2.210933197316723E-5 10-11 0.09902769790781603 12-13 2.653119836780068E-4 14-15 0.005273075675600385 16-17 2.100386537450887E-4 18-19 3.2058531361092485E-4 20-21 7.627719530742694E-4 22-23 2.87421315651174E-4 24-25 0.0017466372258802111 26-27 0.003106361142229996 28-29 0.0070086582354940115 30-31 0.015675516368975566 32-33 0.015520751045163397 34-35 0.011010447322637281 36-37 7.406626211011022E-4 38-39 1.9898398775850508E-4 40-41 0.005361513003493053 42-43 0.008854787455253475 44-45 0.008799514125320557 46-47 0.010236620703576428 48-49 0.012381225904973649 50-51 0.006002683630714903 52-53 0.0016139812340412079 54-55 9.1753727688644E-4 56-57 0.006301159612352661 58-59 0.00929697409471682 60-61 0.007307134217131769 62-63 0.0183507455377288 64-65 0.033650403263160523 66-67 0.03622614043803451 68-69 0.02647592503786776 70-71 0.04082488148845329 72-73 0.0261111210603105 74-75 0.024596631820148544 76-77 0.2359286814856675 78-79 0.06698022121271012 80-81 0.053195052727440365 82-83 0.02046218674116627 84-85 0.031284704742031634 86-87 0.08037847638844947 88-89 0.2635432371201534 90-91 0.31576547924077436 92-93 0.05017712891310303 94-95 0.004875107700083374 96-97 0.009429630086555823 98-99 0.0011054665986583614 100-101 0.0014149972462827027 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4522977.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.84642824155126 #Duplication Level Percentage of deduplicated Percentage of total 1 73.79993511617616 38.26263040231966 2 13.445999636054184 13.94254110533215 3 4.9700694019417595 7.7304103980990915 4 2.3661829324492714 4.907125344544579 5 1.372154765817775 3.557066180113693 6 0.8591242268122289 2.6725513545599062 7 0.569867328539984 2.068190988944696 8 0.4104802820708551 1.702554919116665 9 0.3182591218287586 1.4850538849902466 >10 1.748267465072963 16.35998817159988 >50 0.10262409459463032 3.615023630031948 >100 0.035494746581811475 2.9224041685615054 >500 9.416502720936146E-4 0.35308822807328044 >1k 5.992317874893011E-4 0.42137122371269237 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1054665986583615E-4 2 0.0 0.0 0.0 0.0 1.1054665986583615E-4 3 0.0 0.0 0.0 0.0 1.1054665986583615E-4 4 0.0 0.0 0.0 0.0 1.1054665986583615E-4 5 0.0 0.0 0.0 0.0 1.1054665986583615E-4 6 0.0 0.0 0.0 0.0 1.326559918390034E-4 7 0.0 0.0 0.0 2.210933197316723E-5 1.326559918390034E-4 8 0.0 0.0 0.0 2.210933197316723E-5 1.547653238121706E-4 9 0.0 0.0 0.0 2.210933197316723E-5 1.547653238121706E-4 10-11 0.0 0.0 0.0 2.210933197316723E-5 1.547653238121706E-4 12-13 0.0 0.0 0.0 3.316399795975084E-5 3.6480397755725934E-4 14-15 0.0 0.0 0.0 4.421866394633446E-5 5.085146353828463E-4 16-17 0.0 0.0 0.0 4.421866394633446E-5 5.527332993291807E-4 18-19 0.0 0.0 0.0 4.421866394633446E-5 5.969519632755152E-4 20-21 0.0 0.0 0.0 4.421866394633446E-5 6.190612952486825E-4 22-23 0.0 0.0 0.0 7.73826619060853E-5 6.743346251816005E-4 24-25 0.0 0.0 0.0 1.43710657825587E-4 7.517172870876858E-4 26-27 0.0 0.0 0.0 2.984759816377576E-4 8.512092809669384E-4 28-29 0.0 0.0 0.0 0.0016692545639741259 8.733186129401056E-4 30-31 0.0 0.0 0.0 0.0073181888831183525 8.954279449132728E-4 32-33 0.0 0.0 0.0 0.020218984089461434 9.507012748461909E-4 34-35 0.0 0.0 0.0 0.038459182967324396 0.0010170292707656927 36-37 0.0 0.0 0.0 0.06776510249775757 0.0010170292707656927 38-39 0.0 0.0 0.0 0.11830703538841786 0.0010612479347120272 40-41 0.0 0.0 0.0 0.17627770382206231 0.0010612479347120272 42-43 0.0 0.0 0.0 0.23743211605984288 0.0010833572666851944 44-45 0.0 0.0 0.0 0.3138088033611491 0.001149685262604696 46-47 0.0 0.0 0.0 0.40296468454294593 0.001238122590497365 48-49 0.0 0.0 0.0 0.502390350426279 0.0013155052524034504 50-51 0.0 0.0 0.0 0.6106044757689459 0.0013265599183900339 52-53 0.0 0.0 0.0 0.7207310583272919 0.0013707785823363684 54-55 0.0 0.0 0.0 0.8497942837206557 0.0014149972462827027 56-57 0.0 0.0 0.0 1.001696449042301 0.0014260519122692864 58-59 0.0 0.0 0.0 1.1679696801465052 0.00143710657825587 60-61 0.0 0.0 0.0 1.34705526912916 0.00143710657825587 62-63 0.0 0.0 0.0 1.5335253749908522 0.0014813252422022044 64-65 0.0 0.0 0.0 1.7350187719283117 0.001492379908188788 66-67 0.0 0.0 0.0 1.9742306892119947 0.0015144892401619554 68-69 0.0 0.0 0.0 2.2399627501974915 0.0015255439061485389 70-71 0.0 0.0 0.0 2.525537936628906 0.0015587079041082899 72-73 2.210933197316723E-5 0.0 0.0 2.8271313340748803 0.0017245278939070439 74-75 2.210933197316723E-5 0.0 0.0 3.141725018721077 0.0017245278939070439 76-77 2.210933197316723E-5 0.0 0.0 3.494368863693094 0.0017245278939070439 78-79 2.210933197316723E-5 0.0 0.0 3.8948241390570857 0.0017245278939070439 80-81 2.210933197316723E-5 0.0 0.0 4.314249221254054 0.0017466372258802111 82-83 2.210933197316723E-5 0.0 0.0 4.751240167703704 0.00183507455377288 84-85 2.210933197316723E-5 0.0 0.0 5.212684035315679 0.0018571838857460474 86-87 2.210933197316723E-5 0.0 0.0 5.706672839592153 0.0019456212136387163 88-89 2.210933197316723E-5 0.0 0.0 6.247201787672147 0.0020340585415313853 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3340 0.0 42.686985 1 GTATCAA 5055 0.0 39.20447 1 TCAACGC 6285 0.0 31.03328 4 CAACGCA 6480 0.0 30.151754 5 ATCAACG 6805 0.0 28.731627 3 TATCAAC 6860 0.0 28.50127 2 GTACATG 12580 0.0 28.258015 1 AACGCAG 7125 0.0 27.553534 6 TACATGG 13625 0.0 25.843927 2 ACATGGG 13985 0.0 24.466053 3 CATGGGG 11865 0.0 21.79816 4 ACGCAGA 9070 0.0 21.278 7 CGCAGAG 9470 0.0 19.977686 8 GAGTACA 9580 0.0 19.049625 1 ATGGGGG 7495 0.0 18.901243 5 GTATAGC 1290 0.0 18.788893 1 AGTACAT 9930 0.0 16.96564 2 AGAGTAC 9050 0.0 16.020031 10-11 GCAGAGT 11445 0.0 15.616515 9 TAAGGTG 2100 0.0 15.167056 5 >>END_MODULE