##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921368_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4082474 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.316792709518786 31.0 31.0 34.0 26.0 34.0 2 30.359770570492305 31.0 31.0 34.0 26.0 34.0 3 30.41822189192142 33.0 31.0 34.0 26.0 34.0 4 33.86508768947457 37.0 35.0 37.0 30.0 37.0 5 33.85541169398752 37.0 35.0 37.0 30.0 37.0 6 33.901266731888555 37.0 35.0 37.0 30.0 37.0 7 33.80939229496624 37.0 35.0 37.0 29.0 37.0 8 33.77375434601665 37.0 35.0 37.0 29.0 37.0 9 35.326932639375045 39.0 37.0 39.0 29.0 39.0 10-11 35.22006876222604 39.0 35.0 39.0 29.0 39.0 12-13 35.10028379850061 39.0 35.0 39.0 28.0 39.0 14-15 36.24108567500981 40.0 37.0 41.0 27.0 41.0 16-17 36.188727350131316 40.0 36.5 41.0 27.0 41.0 18-19 36.12558549056283 40.0 36.5 41.0 27.0 41.0 20-21 36.05462018864051 40.0 36.0 41.0 27.0 41.0 22-23 35.939504207497706 40.0 36.0 41.0 27.0 41.0 24-25 35.83969597846796 40.0 36.0 41.0 27.0 41.0 26-27 35.69382021783849 40.0 36.0 41.0 26.5 41.0 28-29 35.55646698546029 40.0 36.0 41.0 25.5 41.0 30-31 35.422127121936356 40.0 36.0 41.0 25.0 41.0 32-33 35.256600042033334 39.5 35.0 41.0 25.0 41.0 34-35 35.099127146921205 39.0 35.0 41.0 24.0 41.0 36-37 34.93621563787056 39.0 35.0 41.0 24.0 41.0 38-39 35.18641061767938 39.5 35.0 41.0 24.5 41.0 40-41 35.31884795837034 40.0 35.0 41.0 24.0 41.0 42-43 35.16432217327042 40.0 35.0 41.0 24.0 41.0 44-45 35.05706062059428 40.0 35.0 41.0 23.0 41.0 46-47 34.91835147021145 40.0 35.0 41.0 23.0 41.0 48-49 34.77630500524927 39.0 35.0 41.0 22.0 41.0 50-51 33.05022652930552 37.0 32.5 39.5 18.0 40.0 52-53 33.2024773458447 37.5 33.0 39.5 18.0 40.0 54-55 34.06040356901232 39.0 34.0 40.5 18.5 41.0 56-57 34.06499943416664 38.5 34.0 41.0 18.0 41.0 58-59 33.873722649550245 38.0 34.0 40.5 18.0 41.0 60-61 33.616231113780515 37.5 34.0 40.0 16.0 41.0 62-63 33.319905405398785 37.0 33.5 40.0 13.0 41.0 64-65 33.01738149465251 36.5 33.0 40.0 12.0 41.0 66-67 32.669221040966825 36.0 33.0 39.0 8.0 41.0 68-69 32.30142127053351 35.5 33.0 39.0 7.0 41.0 70-71 31.92073409408119 35.0 32.0 38.5 4.0 40.0 72-73 31.57101845596567 35.0 32.0 37.0 2.0 39.5 74-75 31.181285906536086 35.0 32.0 37.0 2.0 39.0 76-77 30.817067420392632 35.0 32.0 36.0 2.0 39.0 78-79 30.490255051226292 35.0 31.0 36.0 2.0 37.5 80-81 30.162604219892152 35.0 31.0 35.5 2.0 37.0 82-83 29.881788469442796 35.0 31.0 35.0 2.0 37.0 84-85 29.663228963613733 35.0 31.0 35.0 2.0 36.0 86-87 29.455864385174284 35.0 31.0 35.0 2.0 36.0 88-89 29.272153111079213 35.0 31.0 35.0 2.0 36.0 90-91 29.037387623289213 34.5 30.0 35.0 2.0 35.0 92-93 28.85589057027675 34.0 30.0 35.0 2.0 35.0 94-95 28.658569901486207 34.0 30.0 35.0 2.0 35.0 96-97 28.414009005323734 34.0 30.0 35.0 2.0 35.0 98-99 28.19431109665365 34.0 30.0 35.0 2.0 35.0 100-101 27.157093468323374 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 151497.0 3 25530.0 4 17225.0 5 13089.0 6 11875.0 7 11918.0 8 12482.0 9 13482.0 10 14345.0 11 15404.0 12 15262.0 13 15112.0 14 15672.0 15 16530.0 16 16290.0 17 16568.0 18 16418.0 19 15659.0 20 16184.0 21 17148.0 22 18650.0 23 21388.0 24 25309.0 25 30266.0 26 35951.0 27 43054.0 28 50926.0 29 60192.0 30 72546.0 31 89061.0 32 110852.0 33 144016.0 34 201761.0 35 294180.0 36 498991.0 37 901450.0 38 893363.0 39 142812.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.69915174798046 16.800526600970613 11.88952162585599 25.610800025192937 2 16.575572342846666 18.436264078037294 38.601706826841706 26.386456752274334 3 20.281191521564175 22.029503764675667 28.056317705101552 29.632987008658606 4 13.61896951967908 14.248118752867455 34.82336471686202 37.30954701059145 5 14.904803308529816 36.51280545723133 33.722262684641784 14.860128549597068 6 36.054304606557416 33.41088101053704 15.993669444042933 14.541144938862608 7 30.958024317531667 30.48292821671026 19.579309788968942 18.97973767678913 8 27.89191162419212 34.56542191167319 18.5920924329807 18.95057403115399 9 27.040223084284285 15.392585318909882 18.267892238648443 39.29929935815739 10-11 26.773999088841844 24.577284721734774 26.71053161876839 21.938184570654997 12-13 26.961865375413247 21.69043827756542 26.87750725300993 24.470189094011406 14-15 23.811092176349128 23.472729286652854 23.720212670541514 28.99596586645651 16-17 24.580083336477767 26.657933308275872 24.60018729390687 24.161796061339487 18-19 24.6148506909412 26.04847834172152 25.72145668760814 23.61521427972914 20-21 24.89046030072546 25.267365561350687 25.85280236154434 23.98937177637951 22-23 24.74707416948049 24.982236039928996 25.646563422698193 24.62412636789232 24-25 24.5650061942868 25.256614764371438 25.568785744575816 24.609593296765947 26-27 24.413280476447053 25.478087498091867 25.58227231195462 24.526359713506462 28-29 24.54762157637596 25.65400784957645 25.40774542666438 24.390625147383215 30-31 24.765145055610276 25.363207077428605 25.36492195060945 24.50672591635167 32-33 24.489209979571584 25.369501028770042 25.376654281577014 24.76463471008136 34-35 24.723124881340986 25.46049496885775 25.44514738215246 24.371232767648806 36-37 24.818403834989628 25.36518869981212 25.46652590014232 24.349881565055938 38-39 24.634797653905785 25.55171992281592 25.384762929888844 24.428719493389455 40-41 24.74140537953238 25.303808031072627 25.533065682353833 24.421720907041156 42-43 24.567660007616443 25.277476789542273 25.4208220531779 24.734041149663376 44-45 24.447370881431205 25.389259335512577 25.57612541106242 24.587244371993794 46-47 24.65196213646461 25.363375874021187 25.401254624716923 24.583407364797278 48-49 24.51689326025438 25.458793578871514 25.37462083923166 24.649692321642444 50-51 24.48029549880638 25.51756953605981 25.56911544713532 24.433019517998492 52-53 24.80941793863507 25.29813897278149 25.49079781325283 24.4016452753306 54-55 24.29153602861636 25.174999361943147 25.810638959947703 24.722825649492794 56-57 24.408238948907545 25.402574962985597 25.644363533281673 24.54482255482519 58-59 24.498496169557956 25.319105334395196 25.642020863423237 24.54037763262361 60-61 24.50274935917008 25.364212778114297 25.741777202260746 24.39126066045488 62-63 24.512600859397164 25.34678010761608 25.74991090896418 24.390708124022574 64-65 24.31737358994028 25.188857774777496 25.743095013202467 24.75067362207976 66-67 24.332204578604166 25.34295480477844 25.61950523510774 24.70533538150965 68-69 24.430679979042456 25.23001149720055 25.71570380168372 24.623604722073274 70-71 24.3257769644128 25.096242213732246 25.728921516727475 24.849059305127476 72-73 24.377397715075993 25.257862493294862 25.588996852696066 24.775742938933078 74-75 24.263472560186717 25.425301554712338 25.703149164512507 24.60807672058844 76-77 24.368885464489992 25.128774847681047 25.683699234172447 24.818640453656514 78-79 24.28516010855 25.149208388338323 25.750128581900256 24.81550292121142 80-81 24.408117989425588 25.324011531483237 25.576890198693363 24.690980280397817 82-83 24.436618655228916 25.363424030150263 25.611472965906067 24.588484348714758 84-85 24.419002929269116 25.40067441055347 25.5244893844215 24.655833275755914 86-87 24.305330952276037 25.50841215399724 25.569943394450114 24.61631349927661 88-89 24.17461739126059 25.326822435447145 25.64006038422464 24.85849978906763 90-91 24.31918516278284 25.233709441758347 25.688547464091155 24.75855793136766 92-93 24.37571216236768 25.188075920942627 25.75983113949784 24.676380777191852 94-95 24.384225930851816 25.041818450106224 25.82639469103942 24.74756092800254 96-97 24.28048501430903 24.98141397197905 25.86871880640872 24.869382207303204 98-99 24.152287097765683 24.98638719959778 25.82539723845502 25.035928464181517 100-101 24.413134243635145 24.894600907470135 25.904391916319568 24.787872932575148 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 23.5 2 45.0 3 71.0 4 69.5 5 85.5 6 154.0 7 304.5 8 470.0 9 551.5 10 506.5 11 429.0 12 454.0 13 521.5 14 599.0 15 714.0 16 824.0 17 900.0 18 973.0 19 1109.0 20 1207.0 21 1293.0 22 1462.0 23 1617.5 24 1812.0 25 2095.5 26 2571.0 27 3410.0 28 4662.5 29 6832.5 30 10332.0 31 15437.0 32 23082.5 33 29441.0 34 34934.5 35 43068.5 36 54234.0 37 65978.0 38 77003.0 39 87970.5 40 97559.5 41 107149.5 42 117322.5 43 128230.0 44 139295.0 45 151877.5 46 161718.0 47 168879.0 48 176489.5 49 181795.5 50 184619.0 51 186895.5 52 189106.5 53 189326.5 54 187436.0 55 180984.0 56 169230.5 57 154551.0 58 139989.5 59 123237.0 60 103519.0 61 86484.5 62 71441.0 63 55049.5 64 39836.0 65 28812.5 66 21391.0 67 16286.5 68 12287.0 69 9178.0 70 6855.5 71 4978.5 72 3483.0 73 2536.5 74 2000.0 75 1476.5 76 1028.0 77 709.0 78 451.5 79 305.0 80 232.0 81 185.5 82 146.5 83 126.0 84 110.0 85 89.5 86 73.5 87 64.5 88 65.5 89 62.5 90 52.5 91 39.0 92 27.5 93 22.5 94 23.5 95 26.5 96 20.5 97 12.5 98 16.5 99 12.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04813257843160789 2 0.055628033393476606 3 0.046785356134539983 4 0.05393788178442777 5 0.045805558100308785 6 0.016754546385353584 7 0.013790657331804195 8 0.019938889996605 9 0.019302021274354715 10-11 0.020955430457119874 12-13 0.026087122661405806 14-15 0.04399293173698105 16-17 0.02910000161666676 18-19 0.023025253804433293 20-21 0.026381062071675166 22-23 0.04606275508429447 24-25 0.04158017907768671 26-27 0.030986112832561825 28-29 0.020881945604552532 30-31 0.013215025986693362 32-33 0.010165404605148741 34-35 0.00977348539145626 36-37 0.0015676768547699263 38-39 0.006981060993897328 40-41 0.004102904268343166 42-43 0.20562286495884605 44-45 0.18035632315110886 46-47 0.18689647502960216 48-49 0.18421427791089423 50-51 0.1828793030892542 52-53 0.18749660132556875 54-55 0.18621061640564032 56-57 0.19709862206103457 58-59 0.1929957177926914 60-61 0.1976742534061454 62-63 0.19571465733768298 64-65 0.1970741271101788 66-67 0.18688422755417425 68-69 0.18540228302739958 70-71 0.1702276609722438 72-73 0.1773434441958479 74-75 0.17681680275244865 76-77 0.17499192891369303 78-79 0.20140973341165186 80-81 0.21025241067058847 82-83 0.20770493578158733 84-85 0.20207109708475793 86-87 0.2188256434701115 88-89 0.21784584543588031 90-91 0.21619243625311513 92-93 0.22174054262194934 94-95 0.23297147758932452 96-97 0.23324092204873811 98-99 0.22295304268931046 100-101 0.23276327050705037 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4082474.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.06357836978023 #Duplication Level Percentage of deduplicated Percentage of total 1 75.77401717309503 40.208404986576014 2 12.456443575648347 13.21966939770323 3 4.4362706204382745 7.062131812115396 4 2.140533782520465 4.543375284877471 5 1.2433040103579023 3.2987079895544307 6 0.8012311558412638 2.5509715338175503 7 0.5637830299624028 2.0941441495773483 8 0.4021998883104018 1.7073732234940693 9 0.3000336711452345 1.432877420014922 >10 1.7503796528832678 16.848599497147728 >50 0.09608783215047302 3.4603356830871026 >100 0.03409494095368157 2.7952220376211327 >500 9.724000522032663E-4 0.33369827018953835 >1k 6.482666408480064E-4 0.444488714224169 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 2.44949508557801E-5 0.0 9 0.0 0.0 0.0 2.44949508557801E-5 0.0 10-11 0.0 0.0 0.0 3.674242628367015E-5 0.0 12-13 0.0 0.0 0.0 4.89899017115602E-5 2.44949508557801E-5 14-15 0.0 0.0 0.0 4.89899017115602E-5 3.674242628367015E-5 16-17 0.0 0.0 0.0 4.89899017115602E-5 6.123737713945024E-5 18-19 0.0 0.0 0.0 4.89899017115602E-5 7.34848525673403E-5 20-21 0.0 1.224747542789005E-5 0.0 8.573232799523035E-5 7.34848525673403E-5 22-23 0.0 2.44949508557801E-5 0.0 1.3472222970679052E-4 1.1022727885101044E-4 24-25 0.0 2.44949508557801E-5 0.0 2.2045455770202088E-4 1.469697051346806E-4 26-27 0.0 2.44949508557801E-5 0.0 4.1641416454826167E-4 1.469697051346806E-4 28-29 0.0 2.44949508557801E-5 0.0 0.002155555675308649 1.469697051346806E-4 30-31 0.0 2.44949508557801E-5 0.0 0.009271338898912768 1.5921718056257064E-4 32-33 0.0 2.44949508557801E-5 0.0 0.022547602262745582 2.2045455770202088E-4 34-35 0.0 2.44949508557801E-5 0.0 0.04031868910861404 2.4494950855780096E-4 36-37 0.0 2.44949508557801E-5 0.0 0.06963914528298282 2.4494950855780096E-4 38-39 0.0 2.44949508557801E-5 0.0 0.12116427440811625 2.694444594135811E-4 40-41 0.0 2.44949508557801E-5 0.0 0.18099319187335916 2.694444594135811E-4 42-43 0.0 2.44949508557801E-5 0.0 0.24118953360143874 2.694444594135811E-4 44-45 0.0 3.674242628367015E-5 0.0 0.31464989121792325 2.8169193484147114E-4 46-47 0.0 4.89899017115602E-5 0.0 0.4021091132484861 3.306818365530313E-4 48-49 0.0 4.89899017115602E-5 0.0 0.49801909332429306 3.919192136924816E-4 50-51 0.0 4.89899017115602E-5 0.0 0.6054661952531725 3.919192136924816E-4 52-53 0.0 6.123737713945024E-5 0.0 0.7137338780357205 4.1641416454826167E-4 54-55 0.0 7.34848525673403E-5 0.0 0.8350818645752551 4.1641416454826167E-4 56-57 0.0 7.34848525673403E-5 0.0 0.9798837665591991 4.1641416454826167E-4 58-59 0.0 7.34848525673403E-5 0.0 1.1353899620671193 4.1641416454826167E-4 60-61 0.0 7.34848525673403E-5 0.0 1.3076262090095367 4.286616399761517E-4 62-63 0.0 7.34848525673403E-5 0.0 1.486059678518467 5.14393967971382E-4 64-65 0.0 7.34848525673403E-5 0.0 1.6814069115933132 5.388889188271622E-4 66-67 0.0 9.79798034231204E-5 0.0 1.9058541462848262 5.388889188271622E-4 68-69 0.0 9.79798034231204E-5 0.0 2.152861230714513 5.388889188271622E-4 70-71 0.0 1.1022727885101044E-4 0.0 2.4193785435008284 5.388889188271622E-4 72-73 0.0 1.2247475427890048E-4 0.0 2.7031647966404684 6.001262959666124E-4 74-75 0.0 1.2247475427890048E-4 0.0 2.9950098886116603 6.123737713945025E-4 76-77 0.0 1.2247475427890048E-4 0.0 3.318955613679352 6.123737713945025E-4 78-79 0.0 1.2247475427890048E-4 0.0 3.686931012910309 6.123737713945025E-4 80-81 0.0 1.2247475427890048E-4 0.0 4.078397070011959 6.368687222502825E-4 82-83 0.0 1.2247475427890048E-4 0.0 4.48819759782916 6.613636731060626E-4 84-85 0.0 1.2247475427890048E-4 0.0 4.914862899310565 6.613636731060626E-4 86-87 0.0 1.2247475427890048E-4 0.0 5.370885399392623 6.736111485339527E-4 88-89 0.0 1.2247475427890048E-4 0.0 5.86836560379809 6.858586239618427E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2730 0.0 42.587646 1 GTATCAA 4545 0.0 39.258545 1 TCAACGC 4975 0.0 34.629562 4 CAACGCA 5265 0.0 32.72014 5 ATCAACG 5465 0.0 31.433542 3 TATCAAC 5535 0.0 31.3801 2 AACGCAG 5610 0.0 30.870314 6 GTACATG 11015 0.0 28.520275 1 TACATGG 11365 0.0 26.682241 2 ACATGGG 11715 0.0 25.560066 3 ACGCAGA 7235 0.0 23.152351 7 CATGGGG 10475 0.0 22.382385 4 CGCAGAG 7535 0.0 21.476425 8 TACACCG 645 0.0 21.337578 5 GAGTACA 8075 0.0 20.451113 1 GTATAGG 950 0.0 19.980972 1 GTATATA 1055 0.0 19.34177 1 AGTACAT 8150 0.0 18.458336 2 ATGGGGG 6600 0.0 18.26403 5 ATACCGT 385 2.5465852E-10 17.253546 6 >>END_MODULE