##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921368_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4082474 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.439955526967225 33.0 31.0 34.0 29.0 34.0 2 31.563561947975664 34.0 31.0 34.0 29.0 34.0 3 31.646678950068022 34.0 31.0 34.0 28.0 34.0 4 35.12739627980484 37.0 35.0 37.0 33.0 37.0 5 34.86948330840564 37.0 35.0 37.0 32.0 37.0 6 34.83110119011168 37.0 35.0 37.0 32.0 37.0 7 34.69167617479009 37.0 35.0 37.0 32.0 37.0 8 34.65636449858591 37.0 35.0 37.0 32.0 37.0 9 36.287715243256905 39.0 37.0 39.0 32.0 39.0 10-11 36.13529345196075 39.0 37.0 39.0 32.0 39.0 12-13 36.061554954177296 39.0 37.0 39.0 32.0 39.0 14-15 37.325040159471925 40.0 38.0 41.0 32.0 41.0 16-17 37.30228251300559 40.0 38.0 41.0 31.5 41.0 18-19 37.24753948218654 40.0 38.0 41.0 31.0 41.0 20-21 37.20200863496008 40.0 38.0 41.0 31.0 41.0 22-23 37.09621494221396 40.0 38.0 41.0 31.0 41.0 24-25 37.03142567472567 40.0 37.5 41.0 31.0 41.0 26-27 36.90035784673705 40.0 37.0 41.0 30.0 41.0 28-29 36.74797414508947 40.0 37.0 41.0 30.0 41.0 30-31 36.62355424676312 40.0 37.0 41.0 30.0 41.0 32-33 36.59075122095082 40.0 37.0 41.0 30.0 41.0 34-35 36.744461446662 40.0 37.0 41.0 30.0 41.0 36-37 36.73185083358767 40.0 37.0 41.0 30.0 41.0 38-39 36.65302240749114 40.0 37.0 41.0 30.0 41.0 40-41 36.53601149695014 40.0 37.0 41.0 30.0 41.0 42-43 36.443902765822884 40.0 37.0 41.0 30.0 41.0 44-45 36.32046964659175 40.0 36.5 41.0 29.0 41.0 46-47 36.1835274394889 40.0 36.0 41.0 29.0 41.0 48-49 36.033550489237655 40.0 36.0 41.0 28.0 41.0 50-51 35.87564133905079 40.0 35.0 41.0 28.0 41.0 52-53 35.69631907025005 39.0 35.0 41.0 28.0 41.0 54-55 35.47942950769558 39.0 35.0 41.0 27.5 41.0 56-57 35.20627614529817 39.0 35.0 41.0 27.0 41.0 58-59 34.969170164953894 38.5 35.0 40.5 26.0 41.0 60-61 34.68371286626687 38.0 34.5 40.0 26.0 41.0 62-63 34.37234199164526 37.0 34.0 40.0 26.0 41.0 64-65 34.04036914870738 37.0 34.0 40.0 26.0 41.0 66-67 33.692914884454865 36.0 34.0 39.0 25.5 41.0 68-69 33.32612124412795 36.0 34.0 39.0 25.0 40.5 70-71 32.94484128986492 35.0 33.0 38.5 24.0 40.0 72-73 32.5536666002037 35.0 33.0 37.0 23.0 39.5 74-75 32.154694555311316 35.0 33.0 37.0 22.0 39.0 76-77 29.43503939033047 33.0 29.0 34.5 17.5 36.5 78-79 31.096449848792666 34.5 31.5 35.5 20.0 37.0 80-81 31.304266481550158 35.0 32.0 35.0 20.0 37.0 82-83 31.160367708404266 35.0 32.0 35.0 20.0 37.0 84-85 30.94895791130574 35.0 32.0 35.0 19.5 36.0 86-87 30.722277104520444 35.0 32.0 35.0 18.0 36.0 88-89 30.46337576185421 35.0 32.0 35.0 13.5 35.5 90-91 30.298875632765817 35.0 32.0 35.0 9.0 35.0 92-93 30.168170697474128 34.0 32.0 35.0 7.0 35.0 94-95 30.079593648361264 34.0 32.0 35.0 2.0 35.0 96-97 29.904532153787137 34.0 31.5 35.0 2.0 35.0 98-99 29.653101771131915 34.0 31.0 35.0 2.0 35.0 100-101 28.579290400869667 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 74416.0 3 25901.0 4 14327.0 5 9960.0 6 8911.0 7 8493.0 8 8847.0 9 9656.0 10 10474.0 11 11332.0 12 11942.0 13 12381.0 14 13173.0 15 14204.0 16 14756.0 17 15548.0 18 15085.0 19 14119.0 20 13456.0 21 13655.0 22 14647.0 23 16736.0 24 19654.0 25 23884.0 26 29192.0 27 35044.0 28 41976.0 29 50988.0 30 62866.0 31 78114.0 32 99902.0 33 132381.0 34 191110.0 35 291102.0 36 524291.0 37 1029606.0 38 1007932.0 39 112410.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.33610966791427 18.268884986942542 12.48896751654198 26.906037828601203 2 15.621384681521292 19.647809957488814 37.00285734931555 27.727948011674346 3 18.772758706089245 22.96870165784428 27.92097160644344 30.33756802962303 4 13.253095276180968 15.268543057794576 33.785426683052975 37.69293498297148 5 14.641748898975235 36.740746185462186 33.86456935996619 14.752935555596391 6 36.229101897204316 33.86839890378961 15.65668763784689 14.245811561159192 7 30.855193057144326 30.59679556738935 19.515366922475856 19.032644452990468 8 27.89459979752211 34.98198740404285 18.334194342033808 18.789218456401237 9 26.840961348672725 15.235348770218444 18.094914528522295 39.82877535258653 10-11 26.764050610751138 24.774170358111753 26.62429202776586 21.837487003371248 12-13 26.854330270355074 21.749043990462134 26.912224221423113 24.484401517759675 14-15 23.691776650840442 23.55334822379989 23.6698892327621 29.08498589259757 16-17 24.50131256419219 26.831680452040395 24.499352964763705 24.167654019003706 18-19 24.552831110246707 26.195626560639145 25.658830382254628 23.592711946859517 20-21 24.85269548673595 25.33108533379939 25.76924193335635 24.046977246108305 22-23 24.599702532588164 25.08177659374339 25.618964429325036 24.699556444343415 24-25 24.475933017799832 25.348447162672528 25.53848252914096 24.63713729038668 26-27 24.342796057615324 25.57114447396311 25.566882224619807 24.519177243801764 28-29 24.427935880511225 25.78097154199791 25.3798756599091 24.41121691758176 30-31 24.691528456577206 25.47182233979391 25.310658046902397 24.525991156726487 32-33 24.41696352866326 25.47972580167438 25.34326850264205 24.760042167020305 34-35 24.626109349587423 25.56493628504984 25.485967816337496 24.322986549025245 36-37 24.679285251677673 25.467048660067356 25.51289129746789 24.340774790787087 38-39 24.594340938671436 25.606414169490638 25.420778616038387 24.37846627579954 40-41 24.667743435675384 25.38846909976289 25.522009850146038 24.42177761441569 42-43 24.49397041686397 25.370891567941484 25.40079022606619 24.734347789128353 44-45 24.389187841190125 25.4399637051914 25.536200311283835 24.63464814233464 46-47 24.573264337199962 25.4106592387259 25.43918647047346 24.576889953600684 48-49 24.446289679372942 25.54879237077153 25.40350768026981 24.60141026958572 50-51 24.44358053955433 25.56300285664278 25.521591763540574 24.471824840262315 52-53 24.71346800501421 25.422083469333888 25.399915123404813 24.464533402247085 54-55 24.199592571739938 25.309579218194823 25.727050500356835 24.763777709708407 56-57 24.323448742898947 25.47277168027912 25.536903302472336 24.66687627434959 58-59 24.35655541325379 25.43187414688351 25.570332564773164 24.641237875089537 60-61 24.41706135131335 25.505038751524317 25.640702157337213 24.437197739825123 62-63 24.449838695135767 25.46327374395842 25.585293621891992 24.501593939013823 64-65 24.1699488909047 25.315382666425553 25.634404080886554 24.880264361783198 66-67 24.209016352267835 25.477221920414372 25.521316904857994 24.792444822459796 68-69 24.286452833239817 25.363137867921804 25.589311922222198 24.761097376616185 70-71 24.16118845659362 25.224438855382974 25.62308730285826 24.991285385165146 72-73 24.22767259431077 25.394143475048537 25.435562948963636 24.94262098167706 74-75 24.003978963435923 25.509651558937783 25.5764290518233 24.90994042580299 76-77 24.10394393934316 25.1787312155294 25.60069856078359 25.11662628434385 78-79 23.996445871542768 25.244729319415036 25.679889454349365 25.078935354692828 80-81 24.136677732151547 25.379810820647243 25.454953183073115 25.028558264128097 82-83 24.0859300648039 25.370566575073166 25.544933551530928 24.998569808592002 84-85 24.037968066237923 25.3475691325017 25.476502857700122 25.137959943560258 86-87 23.85962865099933 25.523995647685084 25.479060459890686 25.1373152414249 88-89 23.73798914505688 25.321262625450185 25.5568226764401 25.383925553052833 90-91 23.80376230969916 25.231837914641286 25.6074054462145 25.356994329445055 92-93 23.843575709244973 25.132521628657116 25.664213352102433 25.359689309995474 94-95 23.746347170411244 25.01419243484126 25.725326811815112 25.514133582932384 96-97 23.606154860712863 24.92998101225666 25.7776192539784 25.68624487305208 98-99 23.432626222493738 24.934561097619703 25.754206926554108 25.87860575333245 100-101 23.43515247150678 24.94075509406985 25.794954632897145 25.829137801526226 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 19.5 2 30.5 3 50.0 4 47.0 5 46.5 6 105.0 7 246.0 8 371.5 9 391.0 10 329.0 11 276.5 12 273.5 13 294.0 14 337.0 15 385.5 16 426.0 17 452.5 18 479.0 19 547.5 20 658.0 21 764.5 22 873.5 23 1010.5 24 1258.0 25 1696.0 26 2302.0 27 3239.0 28 4603.0 29 6947.5 30 10633.0 31 15523.5 32 23256.5 33 29974.0 34 35362.5 35 43255.0 36 54130.5 37 65733.0 38 76831.0 39 87904.5 40 97775.0 41 107158.5 42 117161.0 43 128522.5 44 139621.0 45 151838.5 46 161356.0 47 168885.5 48 177393.5 49 182682.5 50 185723.5 51 188614.0 52 191011.5 53 191578.5 54 190235.0 55 183494.5 56 171155.0 57 155801.5 58 140200.5 59 123774.5 60 104173.5 61 86259.0 62 70718.5 63 54077.5 64 38505.5 65 27558.5 66 20280.5 67 15352.0 68 11556.5 69 8442.0 70 6265.5 71 4454.0 72 2999.5 73 2151.0 74 1628.0 75 1141.5 76 762.0 77 466.5 78 249.0 79 126.0 80 74.0 81 52.5 82 42.0 83 26.5 84 16.0 85 11.0 86 9.0 87 6.0 88 5.0 89 3.5 90 1.5 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14393233122856386 2 4.654040662598219E-4 3 0.006001262959666124 4 0.00502146492543492 5 0.025695203447713325 6 0.0011267677393658844 7 9.79798034231204E-5 8 0.0012982323953563452 9 2.44949508557801E-5 10-11 0.09828599030881766 12-13 2.3270203312991095E-4 14-15 0.005388889188271621 16-17 1.7146465599046068E-4 18-19 2.939394102693612E-4 20-21 7.226010502455128E-4 22-23 2.4494950855780096E-4 24-25 0.0018616162650392876 26-27 0.003000631479833062 28-29 0.006932071092185767 30-31 0.015052147300876872 32-33 0.01496641497288164 34-35 0.011390152147937746 36-37 7.348485256734029E-4 38-39 3.0618688569725123E-4 40-41 0.00488674269572813 42-43 0.008597727750378814 44-45 0.008511995422383584 46-47 0.010030682375441951 48-49 0.011965783493048578 50-51 0.005744065975680433 52-53 0.0018738637404671775 54-55 9.185606570917537E-4 56-57 0.005989015484238234 58-59 0.009357071226907997 60-61 0.007642424667003391 62-63 0.018665152552104436 64-65 0.03429293119809214 66-67 0.03701187074308373 68-69 0.027042425744781228 70-71 0.04128623966741735 72-73 0.025976895382554797 74-75 0.024715405413482116 76-77 0.23340013922930067 78-79 0.06641805924544775 80-81 0.054354295948976034 82-83 0.020881945604552532 84-85 0.03202714824393248 86-87 0.07998826201954992 88-89 0.2618142822220056 90-91 0.31271479010031666 92-93 0.04918586131840644 94-95 0.004739772990593449 96-97 0.008989646964071297 98-99 9.797980342312038E-4 100-101 0.0013594697724957955 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4082474.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.00473425011257 #Duplication Level Percentage of deduplicated Percentage of total 1 74.78985507022857 38.894265375316714 2 12.968059473940322 13.488009733638423 3 4.625064939590876 7.215758192188093 4 2.2260744792665865 4.630656468608663 5 1.2798116422471555 3.3278132172631736 6 0.8283931221608145 2.5848218503556515 7 0.5690778666677346 2.0716320256573577 8 0.4134946723436425 1.7202944439254801 9 0.3217184413791771 1.5057793842556073 >10 1.8366214441076945 17.275149644412842 >50 0.10605721274964905 3.7311817966534933 >100 0.03416542159917432 2.78357565930221 >500 9.920732140743084E-4 0.35188543717767984 >1k 6.141405044752619E-4 0.41917677124463276 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.44949508557801E-5 2 0.0 0.0 0.0 0.0 2.44949508557801E-5 3 0.0 0.0 0.0 2.44949508557801E-5 2.44949508557801E-5 4 0.0 0.0 0.0 2.44949508557801E-5 2.44949508557801E-5 5 0.0 0.0 0.0 2.44949508557801E-5 4.89899017115602E-5 6 0.0 0.0 0.0 2.44949508557801E-5 4.89899017115602E-5 7 0.0 0.0 0.0 2.44949508557801E-5 4.89899017115602E-5 8 0.0 0.0 0.0 2.44949508557801E-5 4.89899017115602E-5 9 0.0 0.0 0.0 2.44949508557801E-5 7.34848525673403E-5 10-11 0.0 0.0 0.0 2.44949508557801E-5 7.34848525673403E-5 12-13 0.0 0.0 0.0 2.44949508557801E-5 1.8371213141835075E-4 14-15 0.0 0.0 0.0 2.44949508557801E-5 2.0820708227413083E-4 16-17 0.0 0.0 0.0 2.44949508557801E-5 2.694444594135811E-4 18-19 0.0 1.224747542789005E-5 0.0 2.44949508557801E-5 2.939394102693612E-4 20-21 0.0 2.44949508557801E-5 0.0 6.123737713945024E-5 2.939394102693612E-4 22-23 0.0 2.44949508557801E-5 0.0 1.1022727885101044E-4 3.306818365530313E-4 24-25 0.0 2.44949508557801E-5 0.0 1.959596068462408E-4 3.7967173826459154E-4 26-27 0.0 2.44949508557801E-5 0.0 4.041666891203716E-4 4.1641416454826167E-4 28-29 0.0 2.44949508557801E-5 0.0 0.002241288003303879 4.1641416454826167E-4 30-31 0.0 2.44949508557801E-5 0.0 0.009589773260037909 4.1641416454826167E-4 32-33 0.0 2.44949508557801E-5 0.0 0.023196718460423753 4.6540406625982184E-4 34-35 0.0 2.44949508557801E-5 0.0 0.041298487142845244 5.02146492543492E-4 36-37 0.0 2.44949508557801E-5 0.0 0.07093737767833916 5.14393967971382E-4 38-39 0.0 2.44949508557801E-5 0.0 0.12213182496691957 5.388889188271622E-4 40-41 0.0 2.44949508557801E-5 0.0 0.18112791410306595 5.388889188271622E-4 42-43 0.0 2.44949508557801E-5 0.0 0.24106705884715984 5.388889188271622E-4 44-45 0.0 2.44949508557801E-5 0.0 0.314123249774524 5.388889188271622E-4 46-47 0.0 2.44949508557801E-5 0.0 0.401006840459976 5.633838696829423E-4 48-49 0.0 2.44949508557801E-5 0.0 0.49732098722490337 5.756313451108323E-4 50-51 0.0 2.44949508557801E-5 0.0 0.6042781901366672 6.368687222502825E-4 52-53 0.0 2.44949508557801E-5 0.0 0.7122886759352294 6.858586239618427E-4 54-55 0.0 2.44949508557801E-5 0.0 0.83296305132623 7.103535748176228E-4 56-57 0.0 2.44949508557801E-5 0.0 0.9781078826221551 7.103535748176228E-4 58-59 0.0 2.44949508557801E-5 0.0 1.1339937498683397 7.103535748176228E-4 60-61 0.0 2.44949508557801E-5 0.0 1.3056666129410743 7.103535748176228E-4 62-63 0.0 2.44949508557801E-5 0.0 1.4844675067128414 7.838384273849632E-4 64-65 0.0 2.44949508557801E-5 0.0 1.6797412549351203 7.838384273849632E-4 66-67 0.0 2.44949508557801E-5 0.0 1.9040415199214986 7.838384273849632E-4 68-69 0.0 2.44949508557801E-5 0.0 2.1503137558255117 7.838384273849632E-4 70-71 0.0 2.44949508557801E-5 0.0 2.4171127605466687 7.838384273849632E-4 72-73 0.0 2.44949508557801E-5 0.0 2.7012909329000014 8.328283290965233E-4 74-75 1.224747542789005E-5 2.44949508557801E-5 0.0 2.9942627926105594 8.450758045244134E-4 76-77 2.44949508557801E-5 2.44949508557801E-5 0.0 3.3200456389924344 8.695707553801935E-4 78-79 2.44949508557801E-5 2.44949508557801E-5 0.0 3.690299068652979 8.818182308080835E-4 80-81 2.44949508557801E-5 2.44949508557801E-5 0.0 4.083736969298519 9.185606570917537E-4 82-83 2.44949508557801E-5 2.44949508557801E-5 0.0 4.496207446759 9.797980342312038E-4 84-85 2.44949508557801E-5 2.44949508557801E-5 0.0 4.925885627195666 9.797980342312038E-4 86-87 2.44949508557801E-5 2.44949508557801E-5 0.0 5.384761789052423 0.0010165404605148739 88-89 2.44949508557801E-5 2.44949508557801E-5 0.0 5.887030756350193 0.001028787935942764 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2710 0.0 40.510746 1 GTATCAA 4325 0.0 35.932644 1 GTACATG 10720 0.0 29.082827 1 TCAACGC 5275 0.0 28.880747 4 CAACGCA 5515 0.0 27.755209 5 ATCAACG 5560 0.0 27.40035 3 TACATGG 11390 0.0 26.750824 2 TATCAAC 5990 0.0 25.591843 2 AACGCAG 5990 0.0 25.55237 6 ACATGGG 11870 0.0 25.149296 3 CATGGGG 10045 0.0 23.15112 4 ATGGGGG 6070 0.0 20.205292 5 ACGCAGA 7615 0.0 19.537601 7 TATACCG 320 3.929017E-10 19.312012 5 GAGTACA 7855 0.0 18.937634 1 CGCAGAG 7910 0.0 18.388308 8 TCTACAC 2345 0.0 16.595749 3 AGTACAT 8500 0.0 16.527176 2 GTATAGG 1130 0.0 16.40264 1 TATACAG 1980 0.0 16.085838 5 >>END_MODULE