##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921367_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4246818 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.477161959848527 31.0 31.0 34.0 26.0 34.0 2 30.51645914658928 33.0 31.0 34.0 26.0 34.0 3 30.570730368007293 33.0 31.0 34.0 26.0 34.0 4 34.03638041470108 37.0 35.0 37.0 30.0 37.0 5 34.03254271786547 37.0 35.0 37.0 30.0 37.0 6 34.07667010924415 37.0 35.0 37.0 30.0 37.0 7 33.98820222576056 37.0 35.0 37.0 30.0 37.0 8 33.950937148707574 37.0 35.0 37.0 30.0 37.0 9 35.51976656404866 39.0 37.0 39.0 30.0 39.0 10-11 35.41400055288453 39.0 37.0 39.0 30.0 39.0 12-13 35.2923077937411 39.0 35.0 39.0 29.0 39.0 14-15 36.43802760090025 40.0 37.0 41.0 29.0 41.0 16-17 36.384970935886585 40.0 37.0 41.0 29.0 41.0 18-19 36.31995296242975 40.0 37.0 41.0 28.0 41.0 20-21 36.25227900041867 40.0 37.0 41.0 27.0 41.0 22-23 36.14138562095197 40.0 36.0 41.0 27.0 41.0 24-25 36.04122251059499 40.0 36.0 41.0 27.0 41.0 26-27 35.896429279521755 40.0 36.0 41.0 27.0 41.0 28-29 35.75729557989064 40.0 36.0 41.0 27.0 41.0 30-31 35.61775710661488 40.0 36.0 41.0 26.0 41.0 32-33 35.44906939736998 39.5 35.0 41.0 25.0 41.0 34-35 35.292614140751965 39.0 35.0 41.0 25.0 41.0 36-37 35.130879519678025 39.0 35.0 41.0 24.5 41.0 38-39 35.37865455971977 39.5 35.0 41.0 25.0 41.0 40-41 35.508299154802486 40.0 35.0 41.0 25.0 41.0 42-43 35.35715681717465 40.0 35.0 41.0 24.5 41.0 44-45 35.25114297339796 40.0 35.0 41.0 24.0 41.0 46-47 35.11033861116723 40.0 35.0 41.0 24.0 41.0 48-49 34.972770554330324 39.5 35.0 41.0 23.0 41.0 50-51 33.24023198074417 37.0 32.5 39.5 19.5 40.0 52-53 33.395426999697186 37.5 33.5 39.5 20.5 40.0 54-55 34.263125238708135 39.0 34.0 40.5 21.5 41.0 56-57 34.27612320565656 39.0 34.0 41.0 21.0 41.0 58-59 34.093395219668 38.0 34.0 41.0 20.5 41.0 60-61 33.84118521208114 38.0 34.0 40.0 20.0 41.0 62-63 33.545023003104916 37.0 34.0 40.0 18.5 41.0 64-65 33.24716705542832 37.0 33.5 40.0 18.0 41.0 66-67 32.90541859811275 36.0 33.0 39.0 15.5 41.0 68-69 32.53945589380096 36.0 33.0 39.0 12.5 41.0 70-71 32.156030585723244 35.0 33.0 38.5 9.5 40.5 72-73 31.80265189136902 35.0 32.0 37.5 7.5 40.0 74-75 31.40882797426214 35.0 32.0 37.0 4.0 39.0 76-77 31.036774003500973 35.0 32.0 36.5 2.0 39.0 78-79 30.703122078695152 35.0 32.0 36.0 2.0 38.0 80-81 30.363779187146704 35.0 31.0 35.5 2.0 37.0 82-83 30.072501811944846 35.0 31.0 35.0 2.0 37.0 84-85 29.843115716284522 35.0 31.0 35.0 2.0 36.0 86-87 29.62639863540185 35.0 31.0 35.0 2.0 36.0 88-89 29.433281341465538 35.0 31.0 35.0 2.0 36.0 90-91 29.18596641061614 35.0 31.0 35.0 2.0 35.0 92-93 28.990331349259613 34.0 30.0 35.0 2.0 35.0 94-95 28.778609302305867 34.0 30.0 35.0 2.0 35.0 96-97 28.52686670349424 34.0 30.0 35.0 2.0 35.0 98-99 28.299923613397137 34.0 30.0 35.0 2.0 35.0 100-101 27.244634924312745 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 140810.0 3 24775.0 4 17222.0 5 13015.0 6 11852.0 7 11987.0 8 12606.0 9 13369.0 10 14299.0 11 15398.0 12 15385.0 13 15627.0 14 15806.0 15 17059.0 16 16816.0 17 17308.0 18 16786.0 19 16367.0 20 16867.0 21 17802.0 22 19560.0 23 22470.0 24 26776.0 25 31275.0 26 37459.0 27 45034.0 28 53170.0 29 63901.0 30 75737.0 31 92834.0 32 116252.0 33 151638.0 34 215530.0 35 308314.0 36 511814.0 37 926783.0 38 949545.0 39 157557.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.34644135198234 17.07430154568135 12.041072105881883 25.538184996454426 2 16.46500410895904 19.03767425379042 38.759099082458135 25.738222554792404 3 19.910958200581046 22.792071519911193 28.57853988034154 28.718430399166216 4 13.678220090305421 14.551282428845902 35.33663094580379 36.43386653504489 5 14.60192960708179 37.10818549369323 33.81059941076168 14.4792854884633 6 35.24624563661088 33.74487709502733 16.565688347448944 14.44318892091285 7 30.312402561129204 31.192072444122488 20.026908435957168 18.46861655879114 8 27.728173248033222 34.51460988952499 19.227004626441467 18.530212236000327 9 27.68087106760044 15.139043543959406 18.388001153083085 38.79208423535707 10-11 26.63636078871748 24.62269170177283 27.06528909678466 21.675658412725028 12-13 26.798798124029606 21.856251601621974 27.113505064893957 24.23144520945447 14-15 23.85906829589071 23.606854312237214 24.050528544538153 28.48354884733392 16-17 24.42291813902207 26.720057546548414 24.949026717384196 23.907997597045323 18-19 24.476367993107658 26.282192142817273 26.005664794966783 23.235775069108286 20-21 24.756465833733635 25.444175535613827 26.110346099443454 23.68901253120908 22-23 24.73094823256476 25.105090616804887 25.802208198622917 24.36175295200744 24-25 24.515123775530586 25.28832038037231 25.766082527071188 24.430473317025918 26-27 24.2201445679608 25.61157909823859 25.824225456016087 24.34405087778452 28-29 24.33408181270493 25.977486268064897 25.479657988733713 24.20877393049646 30-31 24.854739903621127 25.511376180817834 25.459707213107997 24.17417670245304 32-33 24.51702907368937 25.555238031654813 25.42133635801342 24.506396536642395 34-35 24.686396825365055 25.663905000212534 25.607539734450953 24.042158439971463 36-37 24.67385112922637 25.667279761945412 25.67461477075331 23.984254338074912 38-39 24.65900684311742 25.71535179491865 25.53077754434533 24.0948638176186 40-41 24.757786347118586 25.45712352095669 25.560098467879726 24.224991664045 42-43 24.41131541044755 25.527511982044395 25.448665977034494 24.61250663047356 44-45 24.23990330851291 25.554997647467903 25.718925905441775 24.48617313857741 46-47 24.437666829724186 25.378135579005377 25.567906694138337 24.616290897132096 48-49 24.306432935888154 25.575817397367288 25.660191388474107 24.457558278270447 50-51 24.463259156385895 25.520056249904897 25.713406451447007 24.3032781422622 52-53 24.657971180661473 25.33876134738747 25.724558956164213 24.278708515786843 54-55 23.962787594559455 25.199564074892393 26.12723195459849 24.710416375949666 56-57 24.13355477008792 25.391310974638664 25.770736514721072 24.70439774055235 58-59 24.348808894799756 25.411337420371705 25.813789077158155 24.426064607670387 60-61 24.521076051307478 25.391159417879145 25.924459153069623 24.163305377743754 62-63 24.45734123215704 25.319416096075038 25.96569206997768 24.257550601790236 64-65 24.113921116344077 25.122755450662886 26.044080481662153 24.719242951330884 66-67 24.24229341620595 25.326316243922655 25.76772712147286 24.663663218398533 68-69 24.156399410734945 25.2890679158765 25.946972042701784 24.607560630686773 70-71 24.125584146869596 25.07938406176554 25.97923913956216 24.815792651802706 72-73 24.09602061891419 25.49354367418775 25.711319868338816 24.699115838559244 74-75 24.097072331873157 25.519766654636122 25.845523104540703 24.537637908950018 76-77 24.081951439521372 25.065229067785154 25.951096539492095 24.90172295320137 78-79 23.967261461302247 25.099998572502315 26.06561227676325 24.867127689432188 80-81 24.224189549281267 25.341798332524156 25.70257153256639 24.73144058562818 82-83 24.267601012606615 25.403651061055477 25.806225546242796 24.52252238009511 84-85 24.187714686022208 25.418954802619815 25.70112874295155 24.69220176840643 86-87 23.927920308230618 25.677676324576666 25.741487887897428 24.652915479295284 88-89 23.90517307191063 25.27547589332985 25.916710216009065 24.90264081875045 90-91 24.132912715706944 25.171501267941267 25.935923775326376 24.759662241025417 92-93 24.35603274707954 25.075261620638482 25.884664022190094 24.684041610091885 94-95 24.183562419148092 25.048059754826212 25.94852667496359 24.819851151062107 96-97 24.042912344733764 24.91981195756536 26.056369774619085 24.98090592308179 98-99 23.858347741959008 24.921103113289732 25.977238757053524 25.243310387697736 100-101 24.120196683680064 24.937587850521442 26.015142240696182 24.927073225102315 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 44.0 2 79.5 3 127.5 4 126.0 5 136.5 6 225.0 7 404.5 8 603.5 9 680.0 10 618.5 11 573.0 12 609.5 13 674.5 14 767.0 15 869.5 16 970.5 17 1068.5 18 1175.5 19 1307.5 20 1401.0 21 1492.0 22 1639.0 23 1773.0 24 1913.0 25 2238.5 26 2723.5 27 3488.0 28 4894.0 29 7357.0 30 11192.5 31 16871.0 32 25634.5 33 33157.0 34 39269.5 35 48246.5 36 60747.5 37 73307.0 38 85052.5 39 96551.5 40 106522.5 41 116666.0 42 126640.5 43 138368.0 44 150251.5 45 160891.0 46 170044.0 47 178032.5 48 186628.0 49 193394.5 50 195846.0 51 196005.0 52 195725.5 53 193527.0 54 189100.0 55 180755.0 56 167671.0 57 151334.0 58 136490.5 59 119651.5 60 98877.0 61 81471.5 62 67634.0 63 52886.5 64 38601.5 65 28737.5 66 21937.5 67 17083.0 68 13286.0 69 10278.0 70 8027.5 71 6066.0 72 4482.5 73 3383.0 74 2632.0 75 2109.0 76 1580.0 77 1070.0 78 733.5 79 510.0 80 357.5 81 263.0 82 222.0 83 186.5 84 137.5 85 105.5 86 92.0 87 78.0 88 66.5 89 62.0 90 56.0 91 44.0 92 32.5 93 32.0 94 33.0 95 24.0 96 17.0 97 15.0 98 10.5 99 8.0 100 9.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04916622280493301 2 0.057313499189275356 3 0.04874237605661462 4 0.05493524799037773 5 0.04747083581165946 6 0.016294552768684693 7 0.013327625530455979 8 0.018602162842862587 9 0.01907310367432746 10-11 0.02088622587546723 12-13 0.026419780645179518 14-15 0.042655465809931105 16-17 0.02852724086598484 18-19 0.02225195428671537 20-21 0.02492454350527854 22-23 0.04497484940489562 24-25 0.04035962925653984 26-27 0.029940063360379465 28-29 0.02062720841816155 30-31 0.013080381593936919 32-33 0.009854436898402522 34-35 0.009618966482670084 36-37 0.0014363695359678704 38-39 0.00679332149388083 40-41 0.003626244402279542 42-43 0.20744943626027768 44-45 0.1829251924617443 46-47 0.18902387622921443 48-49 0.18725784811122115 50-51 0.18549181999322786 52-53 0.18995398437135755 54-55 0.18876485877190877 56-57 0.19866638975345774 58-59 0.195358030412417 60-61 0.1998790623944798 62-63 0.1973477554253561 64-65 0.19806594019334006 66-67 0.18892968806292146 68-69 0.18787007119212548 70-71 0.17194049756782606 72-73 0.17903993060215906 74-75 0.17914589228923866 76-77 0.17723858192180592 78-79 0.2032698363810269 80-81 0.21134647164064957 82-83 0.2082618091945546 84-85 0.20372900369170516 86-87 0.21996468885645679 88-89 0.21869314861150158 90-91 0.2175746641367725 92-93 0.22210746963962194 94-95 0.23323344678297964 96-97 0.2331628056582599 98-99 0.22330836875985738 100-101 0.23223269751611675 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4246818.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.08517210940891 #Duplication Level Percentage of deduplicated Percentage of total 1 74.28614535923734 38.69206666380445 2 13.12406080862264 13.671379319829171 3 4.815797747025353 7.524949634937577 4 2.305585425156529 4.8034725472889015 5 1.3526111243078123 3.5225491603336745 6 0.872258916624771 2.725905347782065 7 0.6108098081870864 2.226989378987761 8 0.4263810950513568 1.7766506175958523 9 0.31955193529285186 1.49795257928606 >10 1.7541330707921763 16.36649078424906 >50 0.09726560254068116 3.421880804414137 >100 0.0333124382140491 2.7993495965404547 >500 0.0014062335968033216 0.4740535098269153 >1k 6.804353504903857E-4 0.4963100551239891 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.709408314648756E-5 2 0.0 0.0 0.0 0.0 7.064112471973133E-5 3 0.0 0.0 0.0 0.0 7.064112471973133E-5 4 0.0 0.0 0.0 0.0 9.418816629297512E-5 5 0.0 0.0 0.0 2.354704157324378E-5 9.418816629297512E-5 6 0.0 0.0 0.0 2.354704157324378E-5 1.1773520786621889E-4 7 0.0 0.0 0.0 2.354704157324378E-5 1.1773520786621889E-4 8 0.0 0.0 0.0 2.354704157324378E-5 1.4128224943946266E-4 9 0.0 0.0 0.0 2.354704157324378E-5 1.6482929101270646E-4 10-11 0.0 0.0 0.0 2.354704157324378E-5 1.8837633258595024E-4 12-13 0.0 0.0 0.0 4.709408314648756E-5 2.3547041573243778E-4 14-15 0.0 0.0 0.0 4.709408314648756E-5 3.532056235986567E-4 16-17 0.0 0.0 0.0 4.709408314648756E-5 4.473937898916318E-4 18-19 0.0 0.0 0.0 7.064112471973133E-5 4.944878730381194E-4 20-21 0.0 0.0 0.0 8.241464550635323E-5 6.004495601177164E-4 22-23 0.0 0.0 0.0 1.05961687079597E-4 6.593171640508259E-4 24-25 0.0 0.0 0.0 2.7079097809230347E-4 7.299582887705571E-4 26-27 0.0 0.0 0.0 4.944878730381194E-4 7.888258927036666E-4 28-29 0.0 0.0 0.0 0.0026843627393497906 8.005994134902885E-4 30-31 0.0 0.0 0.0 0.012056085285500815 8.123729342769104E-4 32-33 0.0 0.0 0.0 0.03242427624635669 8.830140589966417E-4 34-35 0.0 0.0 0.0 0.060515896843236515 9.183346213565074E-4 36-37 0.0 0.0 0.0 0.10437226177340306 9.183346213565074E-4 38-39 0.0 0.0 0.0 0.17852189568754773 9.418816629297511E-4 40-41 0.0 0.0 0.0 0.2631381895809992 9.65428704502995E-4 42-43 0.0 0.0 0.0 0.3526169475593256 9.772022252896168E-4 44-45 0.0 0.0 0.0 0.4602387010698363 0.0010242963084361044 46-47 0.0 0.0 0.0 0.5843433836816176 0.0010831639123692139 48-49 0.0 0.0 0.0 0.7187969910648396 0.0011538050370889451 50-51 0.0 0.0 0.0 0.8638703141975945 0.001177352078662189 52-53 0.0 0.0 0.0 1.0156309971371507 0.0013186343281016517 54-55 0.0 0.0 0.0 1.1905855160263519 0.0014363695359678706 56-57 0.0 0.0 0.0 1.3937376171995126 0.0014599165775411142 58-59 0.0 0.0 0.0 1.6102762115070623 0.001483463619114358 60-61 0.0 0.0 0.0 1.8386471942051672 0.0015070106606876019 62-63 0.0 0.0 0.0 2.0859029042450135 0.0015776517854073331 64-65 0.0 0.0 0.0 2.3544686869086453 0.001589425306193955 66-67 0.0 0.0 0.0 2.6648186948439987 0.0016365193893404426 68-69 0.0 0.0 0.0 3.0061566094897403 0.0016718399517003082 70-71 0.0 0.0 0.0 3.3715478271025505 0.001730707555633418 72-73 0.0 0.0 0.0 3.751844322031224 0.0018955368466461243 74-75 0.0 0.0 0.0 4.1459629303633925 0.00193085740900599 76-77 0.0 0.0 0.0 4.589730475852744 0.00193085740900599 78-79 0.0 0.0 0.0 5.085843094759417 0.0019426309297926117 80-81 0.0 0.0 0.0 5.60144089056795 0.002048592616872209 82-83 0.0 0.0 0.0 6.140526860345793 0.0021663278247384277 84-85 0.0 0.0 0.0 6.704278356171609 0.0021663278247384277 86-87 0.0 0.0 0.0 7.307353411424742 0.0021898748663116713 88-89 0.0 0.0 0.0 7.959535821878875 0.0022134219078849154 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2875 0.0 43.578293 1 GTATCAA 5150 0.0 42.02055 1 TCAACGC 6275 0.0 34.03762 4 CAACGCA 6370 0.0 33.528812 5 ATCAACG 6555 0.0 32.291775 3 GTACATG 13205 0.0 31.94975 1 TATCAAC 6760 0.0 31.59371 2 AACGCAG 6845 0.0 31.190725 6 TACATGG 13860 0.0 29.82564 2 ACATGGG 14150 0.0 28.040098 3 CATGGGG 12390 0.0 25.359875 4 ACGCAGA 8605 0.0 24.208714 7 CGCAGAG 9025 0.0 22.769314 8 ATGGGGG 8425 0.0 21.632483 5 GAGTACA 9280 0.0 21.580853 1 AGTACAT 9685 0.0 19.454754 2 TACACTG 5315 0.0 18.84188 5 GTATAGC 1000 0.0 18.508394 1 GCAGAGT 10380 0.0 18.47112 9 GTAAGTA 2195 0.0 18.162666 2 >>END_MODULE