##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921367_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4246818 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4261548293334 33.0 31.0 34.0 29.0 34.0 2 31.549567699863758 34.0 31.0 34.0 29.0 34.0 3 31.62934154465767 34.0 31.0 34.0 28.0 34.0 4 35.120879915268326 37.0 35.0 37.0 33.0 37.0 5 34.86242664507874 37.0 35.0 37.0 32.0 37.0 6 34.81735925580046 37.0 35.0 37.0 32.0 37.0 7 34.678891113299414 37.0 35.0 37.0 32.0 37.0 8 34.640450096990264 37.0 35.0 37.0 32.0 37.0 9 36.26693774020926 39.0 37.0 39.0 32.0 39.0 10-11 36.11354807293367 39.0 37.0 39.0 32.0 39.0 12-13 36.0373821058496 39.0 37.0 39.0 31.0 39.0 14-15 37.28612127950856 40.0 38.0 41.0 31.0 41.0 16-17 37.25776122263775 40.0 38.0 41.0 31.0 41.0 18-19 37.209945187196624 40.0 38.0 41.0 31.0 41.0 20-21 37.16725122197372 40.0 38.0 41.0 31.0 41.0 22-23 37.06100744133607 40.0 38.0 41.0 31.0 41.0 24-25 36.99181693211247 40.0 37.0 41.0 31.0 41.0 26-27 36.85702318771372 40.0 37.0 41.0 30.0 41.0 28-29 36.703151277026706 40.0 37.0 41.0 30.0 41.0 30-31 36.572071372024894 40.0 37.0 41.0 30.0 41.0 32-33 36.53432205006195 40.0 37.0 41.0 30.0 41.0 34-35 36.67877125885781 40.0 37.0 41.0 30.0 41.0 36-37 36.66493902022644 40.0 37.0 41.0 30.0 41.0 38-39 36.58698536174614 40.0 37.0 41.0 30.0 41.0 40-41 36.4722254403179 40.0 37.0 41.0 30.0 41.0 42-43 36.37718899185225 40.0 36.5 41.0 30.0 41.0 44-45 36.25559878007488 40.0 36.0 41.0 29.0 41.0 46-47 36.11767692893832 40.0 36.0 41.0 28.5 41.0 48-49 35.96878710130738 40.0 35.5 41.0 28.0 41.0 50-51 35.812341381241204 39.5 35.0 41.0 28.0 41.0 52-53 35.63491018451933 39.0 35.0 41.0 28.0 41.0 54-55 35.42172351157973 39.0 35.0 41.0 27.0 41.0 56-57 35.152679723972156 39.0 35.0 41.0 26.0 41.0 58-59 34.92118487300374 38.5 35.0 40.5 26.0 41.0 60-61 34.63599746916397 38.0 34.5 40.0 26.0 41.0 62-63 34.32579451250324 37.0 34.0 40.0 26.0 41.0 64-65 34.00647131570037 37.0 34.0 40.0 26.0 41.0 66-67 33.66553841016969 36.0 34.0 39.0 25.0 41.0 68-69 33.29686037875888 36.0 34.0 39.0 24.0 40.5 70-71 32.91385397255074 35.0 33.0 38.5 23.5 40.0 72-73 32.51966766647405 35.0 33.0 37.0 22.5 39.5 74-75 32.11908857408064 35.0 33.0 37.0 21.5 39.0 76-77 29.37673994976945 33.0 29.0 34.5 16.5 36.5 78-79 31.043997058503567 34.5 31.5 35.5 19.5 37.0 80-81 31.25349544058634 35.0 32.0 35.5 20.0 37.0 82-83 31.102774948208282 35.0 32.0 35.0 19.5 37.0 84-85 30.887924559046326 35.0 32.0 35.0 18.5 36.0 86-87 30.654547122104127 35.0 32.0 35.0 17.5 36.0 88-89 30.396075249751696 35.0 32.0 35.0 10.5 35.5 90-91 30.222385560200603 35.0 32.0 35.0 7.5 35.0 92-93 30.084866128004542 34.0 31.0 35.0 4.5 35.0 94-95 29.994735823385888 34.0 31.0 35.0 2.0 35.0 96-97 29.815653508108895 34.0 31.0 35.0 2.0 35.0 98-99 29.559419782058 34.0 31.0 35.0 2.0 35.0 100-101 28.464637994846967 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 77508.0 3 27108.0 4 14935.0 5 10420.0 6 9229.0 7 9125.0 8 9439.0 9 9943.0 10 11152.0 11 11725.0 12 12739.0 13 13186.0 14 14030.0 15 14965.0 16 15961.0 17 16653.0 18 16234.0 19 15016.0 20 14661.0 21 14710.0 22 15758.0 23 17830.0 24 21149.0 25 25305.0 26 30743.0 27 37308.0 28 44741.0 29 54342.0 30 66026.0 31 82997.0 32 105532.0 33 140715.0 34 206045.0 35 306596.0 36 536398.0 37 1044185.0 38 1050477.0 39 121930.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.274663891535965 18.47256504566302 12.599253723775922 26.653517339025086 2 15.586528404196853 20.225948843388508 37.182072533638255 27.00545021877639 3 18.435708408707818 23.781829776191348 28.490095780739956 29.292366034360874 4 13.35566632569057 15.622851238346058 34.28394548903696 36.73753694692641 5 14.387019261909062 37.333848045698545 33.883422359887106 14.395710332505288 6 35.35127671267972 34.25846867946103 16.231621897698155 14.158632710161095 7 30.170137034556742 31.293803445973122 20.02737582921024 18.508683690259893 8 27.748637840380958 34.863374312915596 18.96052721740795 18.427460629295492 9 27.495456598328445 15.001537621814734 18.275329905825963 39.227675874030865 10-11 26.520329832990463 24.797460632927862 27.095786294922586 21.58642323915909 12-13 26.699986613467463 21.958281348180414 27.134619186115305 24.20711285223682 14-15 23.743476114398636 23.712251182208664 24.023711638928635 28.52056106446406 16-17 24.412929525641264 26.88847173888524 24.847208738235572 23.851389997237927 18-19 24.429565016319334 26.432259749274927 25.98006076571011 23.15811446869563 20-21 24.701262108282904 25.50516473292843 26.046056509127023 23.747516649661637 22-23 24.582133413079465 25.215550024606703 25.776535799812095 24.425780762501738 24-25 24.41231585347303 25.429304358105036 25.697203087346242 24.461176701075694 26-27 24.186974017689515 25.742524131107068 25.767932112886793 24.302569738316627 28-29 24.243115358390387 26.106869941391047 25.44832134336331 24.20169335685525 30-31 24.792325150529383 25.610448541877982 25.43365438260875 24.163571924983884 32-33 24.472673954303 25.644960996771925 25.400188451427123 24.482176597497944 34-35 24.602884998406278 25.74126387030919 25.62601182593362 24.02983930535092 36-37 24.5511517944215 25.748610154996022 25.726581734212445 23.973656316370036 38-39 24.574483703832865 25.825952011291292 25.54760200682324 24.051962278052606 40-41 24.682816692326423 25.548580298865115 25.5396908301657 24.228912178642766 42-43 24.4079303702378 25.611167890431087 25.3811056739025 24.599796065428617 44-45 24.215071392255542 25.63080055453131 25.6523478683113 24.501780184901854 46-47 24.388079662180246 25.513701997206343 25.520460653025097 24.577757687588317 48-49 24.1657925735922 25.70984050607752 25.663859363880043 24.460507556450242 50-51 24.39172601855853 25.561624512988736 25.7096853574595 24.33696411099324 52-53 24.616520870638876 25.423056513773435 25.65083104265657 24.30959157293112 54-55 23.86062030386127 25.322742077014464 26.050000076528683 24.766637542595575 56-57 24.081634911802336 25.437738620679752 25.69855089118414 24.782075576333774 58-59 24.227086837280126 25.473742241078444 25.794755183329322 24.504415738312105 60-61 24.42712471570531 25.501474870680944 25.832667290556827 24.238733123056917 62-63 24.320317753025446 25.464883368483527 25.86696152790878 24.347837350582243 64-65 23.956730856429612 25.266318853360865 25.913916795689246 24.863033494520277 66-67 24.11561573233269 25.494762406160266 25.61831167393358 24.771310187573466 68-69 23.99753208954855 25.423599470240106 25.77245856216306 24.806409878048292 70-71 23.941643891249008 25.21848853518219 25.806617269804953 25.033250303763843 72-73 23.90981645962195 25.583999873755857 25.515625480260635 24.990558186361557 74-75 23.828540991658905 25.583104841990924 25.62907985556026 24.959274310789915 76-77 23.77812641171964 25.1354188744762 25.85845535390174 25.22799935990242 78-79 23.654360346445504 25.184111763607437 25.940610856729833 25.220917033217226 80-81 23.84514213857222 25.421426951699683 25.590703345181897 25.142727564546195 82-83 23.825662922724373 25.455384753071737 25.68375424225795 25.035198081945943 84-85 23.69489939674083 25.45668422040689 25.616090585685015 25.232325797167267 86-87 23.467674040313405 25.66417906490761 25.613924285548485 25.254222609230503 88-89 23.404816638976353 25.29021710582618 25.761953804885103 25.543012450312364 90-91 23.49805338648392 25.152119779681424 25.860421598552126 25.48940523528253 92-93 23.633900878192065 25.068023280400098 25.801728820255633 25.49634702115221 94-95 23.36905400369589 25.054882044078713 25.851494398764192 25.7245695534612 96-97 23.11654997273007 24.95091177636964 25.999732481544523 25.93280576935576 98-99 22.923546421271745 24.87619973815332 25.963369721858548 26.236884118716386 100-101 22.917771677171356 25.019635582890416 25.916273238775634 26.146319501162594 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 44.5 2 67.0 3 103.0 4 91.0 5 104.5 6 175.5 7 330.5 8 523.0 9 556.5 10 443.5 11 332.0 12 349.5 13 409.5 14 415.5 15 442.5 16 488.0 17 554.5 18 614.5 19 676.5 20 759.5 21 861.5 22 974.0 23 1168.0 24 1477.5 25 1842.5 26 2441.5 27 3404.0 28 4976.5 29 7651.0 30 11647.0 31 17443.5 32 26210.5 33 33588.5 34 39721.0 35 48592.0 36 60797.5 37 73123.0 38 84553.5 39 95998.0 40 106286.5 41 116087.5 42 126302.0 43 138599.0 44 150293.5 45 161211.0 46 170544.5 47 179047.5 48 188240.5 49 194958.0 50 197423.0 51 198059.5 52 197740.5 53 195809.5 54 191408.5 55 181878.0 56 168699.0 57 152475.5 58 136702.5 59 119443.5 60 98848.5 61 81506.0 62 67300.0 63 51955.0 64 37496.5 65 27645.0 66 20990.0 67 16244.5 68 12650.0 69 9710.0 70 7355.0 71 5494.5 72 4025.5 73 3086.0 74 2377.5 75 1744.5 76 1212.5 77 746.0 78 441.0 79 276.5 80 178.0 81 107.5 82 71.5 83 45.5 84 31.0 85 24.0 86 18.5 87 18.0 88 12.0 89 3.5 90 2.0 91 4.0 92 3.5 93 2.5 94 2.0 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14827572078671608 2 3.7675266517190047E-4 3 0.005745478143871482 4 0.0043797497326233436 5 0.025454351940676523 6 0.0012244461618086764 7 1.412822494394627E-4 8 0.0016247458685538206 9 0.0 10-11 0.09856791602559846 12-13 2.9433801966554724E-4 14-15 0.004980199292741059 16-17 2.5901745730568155E-4 18-19 3.532056235986567E-4 20-21 8.241464550635323E-4 22-23 1.8837633258595024E-4 24-25 0.0015070106606876019 26-27 0.002849192030362497 28-29 0.006652039244441367 30-31 0.014999465482156289 32-33 0.014858183232716824 34-35 0.011125977143357686 36-37 7.41731809557179E-4 38-39 1.5305577022608455E-4 40-41 0.0051803491461136315 42-43 0.008429840883221273 44-45 0.008217917509062079 46-47 0.009689607607389815 48-49 0.012056085285500815 50-51 0.005957401518030676 52-53 0.0017542545972066615 54-55 0.0010478433500093482 56-57 0.006522530515788528 58-59 0.009795569294469411 60-61 0.008100182301195859 62-63 0.017730922304652563 64-65 0.03383709874075131 66-67 0.03645082035538137 68-69 0.026396233603606278 70-71 0.041066040503737154 72-73 0.02534839025359693 74-75 0.024335867465947448 76-77 0.23462272223580102 78-79 0.06735631242026383 80-81 0.05369902830778244 82-83 0.019967891254110724 84-85 0.032471370329503174 86-87 0.08101359653274522 88-89 0.2585582899950033 90-91 0.31345821742302116 92-93 0.05019051911336912 94-95 0.0049566522511678155 96-97 0.008994969880979123 98-99 0.0013657284112481391 100-101 0.0014952371399009799 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4246818.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.35986537745932 #Duplication Level Percentage of deduplicated Percentage of total 1 73.50667958556329 37.75293167858568 2 13.617731865259486 13.988097506921305 3 4.908892705558588 7.563602055296435 4 2.363054205958552 4.85464583590681 5 1.3746744073099544 3.5301546248638975 6 0.8750647011296204 2.6965923147950392 7 0.6197943616352349 2.228278848270581 8 0.437459502391958 1.7974288920753048 9 0.3362718983193679 1.5543791485114884 >10 1.826358201028488 16.84942141614297 >50 0.09789323151057427 3.4050182300168332 >100 0.03405839890435821 2.8294811953519914 >500 0.0013320251644032186 0.4457200822447015 >1k 7.349102661395655E-4 0.5042481710170347 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.709408314648756E-5 2 0.0 0.0 0.0 0.0 4.709408314648756E-5 3 0.0 0.0 0.0 0.0 4.709408314648756E-5 4 0.0 0.0 0.0 0.0 4.709408314648756E-5 5 0.0 0.0 0.0 0.0 4.709408314648756E-5 6 0.0 0.0 0.0 0.0 7.064112471973133E-5 7 0.0 0.0 0.0 0.0 7.064112471973133E-5 8 0.0 0.0 0.0 2.354704157324378E-5 1.1773520786621889E-4 9 0.0 0.0 0.0 9.418816629297512E-5 1.4128224943946266E-4 10-11 0.0 0.0 0.0 9.418816629297512E-5 1.5305577022608455E-4 12-13 0.0 0.0 0.0 1.1773520786621889E-4 2.9433801966554724E-4 14-15 0.0 1.177352078662189E-5 0.0 1.1773520786621889E-4 3.532056235986567E-4 16-17 0.0 2.354704157324378E-5 0.0 1.1773520786621889E-4 4.0029970674514424E-4 18-19 0.0 2.354704157324378E-5 0.0 1.1773520786621889E-4 4.0029970674514424E-4 20-21 0.0 2.354704157324378E-5 0.0 1.2950872865284078E-4 4.7094083146487556E-4 22-23 0.0 2.354704157324378E-5 0.0 1.5305577022608455E-4 5.533554769712288E-4 24-25 0.0 3.532056235986567E-5 0.0 2.9433801966554724E-4 6.122230809043383E-4 26-27 0.0 4.709408314648756E-5 0.0 5.29808435397985E-4 6.122230809043383E-4 28-29 0.0 4.709408314648756E-5 0.0 0.002778550905642766 6.122230809043383E-4 30-31 0.0 4.709408314648756E-5 0.0 0.012350423305166362 6.122230809043383E-4 32-33 0.0 4.709408314648756E-5 0.0 0.03303649932726102 6.593171640508259E-4 34-35 2.354704157324378E-5 4.709408314648756E-5 0.0 0.061493099068526125 6.828642056240696E-4 36-37 2.354704157324378E-5 4.709408314648756E-5 0.0 0.10538478456105253 6.828642056240696E-4 38-39 2.354704157324378E-5 4.709408314648756E-5 0.0 0.178886874831933 7.41731809557179E-4 40-41 2.354704157324378E-5 5.8867603933109445E-5 0.0 0.2632206042265056 7.770523719170447E-4 42-43 2.354704157324378E-5 7.064112471973133E-5 0.0 0.3527346827671918 7.770523719170447E-4 44-45 2.354704157324378E-5 7.064112471973133E-5 0.0 0.46027402163219616 7.888258927036666E-4 46-47 2.354704157324378E-5 7.064112471973133E-5 0.0 0.5845553070557767 8.47693496636776E-4 48-49 2.354704157324378E-5 7.064112471973133E-5 0.0 0.7177726947564035 9.183346213565074E-4 50-51 2.354704157324378E-5 7.064112471973133E-5 0.0 0.8618688156638687 9.418816629297511E-4 52-53 2.354704157324378E-5 7.064112471973133E-5 0.0 1.0132409724174665 0.0010831639123692139 54-55 4.709408314648756E-5 7.064112471973133E-5 0.0 1.1875832682257634 0.001165578557875567 56-57 4.709408314648756E-5 7.064112471973133E-5 0.0 1.3901584668803797 0.0012008991202354328 58-59 4.709408314648756E-5 7.064112471973133E-5 0.0 1.6065440054177034 0.0012362196825952984 60-61 4.709408314648756E-5 7.064112471973133E-5 0.0 1.8340790681399581 0.001271540244955164 62-63 4.709408314648756E-5 7.064112471973133E-5 0.0 2.07978067343597 0.0014128224943946268 64-65 4.709408314648756E-5 7.064112471973133E-5 0.0 2.3473103862703795 0.0014128224943946268 66-67 4.709408314648756E-5 7.064112471973133E-5 0.0 2.6569186623961754 0.0014128224943946268 68-69 4.709408314648756E-5 7.064112471973133E-5 0.0 2.9974559776284266 0.0014128224943946268 70-71 4.709408314648756E-5 7.064112471973133E-5 0.0 3.363223947906409 0.0014245960151812488 72-73 4.709408314648756E-5 7.064112471973133E-5 0.0 3.743850101417108 0.0015305577022608457 74-75 4.709408314648756E-5 7.064112471973133E-5 0.0 4.140311640385813 0.0015658782646207113 76-77 4.709408314648756E-5 7.064112471973133E-5 0.0 4.586445663553277 0.0016247458685538208 78-79 4.709408314648756E-5 7.064112471973133E-5 0.0 5.085466342094246 0.0016482929101270646 80-81 4.709408314648756E-5 7.064112471973133E-5 0.0 5.606067884237092 0.0016836134724869303 82-83 4.709408314648756E-5 7.064112471973133E-5 0.0 6.1485681750430565 0.001718934034846796 84-85 4.709408314648756E-5 7.064112471973133E-5 0.0 6.717735490430718 0.001718934034846796 86-87 4.709408314648756E-5 7.064112471973133E-5 0.0 7.32646183566143 0.0017660281179932833 88-89 4.709408314648756E-5 7.064112471973133E-5 0.0 7.984036518635835 0.001813122201139771 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2805 0.0 48.966656 1 GTATCAA 5385 0.0 42.275158 1 TCAACGC 6740 0.0 32.744225 4 CAACGCA 7015 0.0 31.312946 5 TATCAAC 7290 0.0 30.794651 2 GTACATG 13380 0.0 30.68973 1 ATCAACG 7235 0.0 30.503948 3 AACGCAG 7470 0.0 29.59242 6 TACATGG 13890 0.0 29.009958 2 ACATGGG 14100 0.0 27.702717 3 ACGCAGA 8930 0.0 23.955717 7 CATGGGG 12535 0.0 23.89168 4 CGCAGAG 9425 0.0 22.243614 8 ATGGGGG 8170 0.0 22.114195 5 GAGTACA 9790 0.0 19.175638 1 TACCGTA 305 4.5256456E-9 18.703785 7 GTACCGT 640 0.0 18.56984 6 AGAGTAC 8870 0.0 18.088322 10-11 GCAGAGT 10990 0.0 17.778383 9 AGTACAT 9960 0.0 17.535982 2 >>END_MODULE