##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921366_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2951131 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.595370385116755 31.0 31.0 34.0 27.0 34.0 2 30.655865835843954 33.0 31.0 34.0 27.0 34.0 3 30.691701588306312 33.0 31.0 34.0 27.0 34.0 4 34.17259213501536 37.0 35.0 37.0 30.0 37.0 5 34.172696840635 37.0 35.0 37.0 30.0 37.0 6 34.220516134322736 37.0 35.0 37.0 30.0 37.0 7 34.149651777572736 37.0 35.0 37.0 30.0 37.0 8 34.1162649167387 37.0 35.0 37.0 30.0 37.0 9 35.69132410591058 39.0 37.0 39.0 30.0 39.0 10-11 35.59051478907578 39.0 37.0 39.0 30.0 39.0 12-13 35.487023449653705 39.0 37.0 39.0 30.0 39.0 14-15 36.636803313712605 40.0 37.0 41.0 30.0 41.0 16-17 36.583192172763596 40.0 37.0 41.0 30.0 41.0 18-19 36.54633986088723 40.0 37.0 41.0 29.5 41.0 20-21 36.49274396832943 40.0 37.0 41.0 29.0 41.0 22-23 36.38180243438872 40.0 37.0 41.0 29.0 41.0 24-25 36.28330104627683 40.0 36.5 41.0 28.0 41.0 26-27 36.13435154183261 40.0 36.0 41.0 27.5 41.0 28-29 35.99882011337348 40.0 36.0 41.0 27.0 41.0 30-31 35.84592991636088 40.0 36.0 41.0 27.0 41.0 32-33 35.66163684363724 40.0 35.5 41.0 26.5 41.0 34-35 35.500673809464914 39.5 35.0 41.0 25.5 41.0 36-37 35.33021983775034 39.0 35.0 41.0 25.0 41.0 38-39 35.5453715880454 39.5 35.0 41.0 26.0 41.0 40-41 35.662555643920925 40.0 35.5 41.0 26.0 41.0 42-43 35.49234191908119 40.0 35.0 41.0 25.0 41.0 44-45 35.37105028546682 40.0 35.0 41.0 24.5 41.0 46-47 35.2161981287852 40.0 35.0 41.0 24.0 41.0 48-49 35.06835396327713 40.0 35.0 41.0 23.5 41.0 50-51 33.363163648106436 37.0 32.5 39.5 20.0 40.0 52-53 33.52471611731231 37.5 33.5 39.5 21.0 40.0 54-55 34.39314825400838 39.0 34.0 40.5 22.0 41.0 56-57 34.41298759695859 39.0 34.0 41.0 22.0 41.0 58-59 34.24297870884078 38.5 34.0 41.0 21.0 41.0 60-61 34.00559412645525 38.0 34.0 40.5 20.0 41.0 62-63 33.72350752982501 37.5 34.0 40.0 18.5 41.0 64-65 33.44321295801508 37.0 34.0 40.0 18.0 41.0 66-67 33.11172411526293 36.5 33.5 39.5 15.5 41.0 68-69 32.753157179400034 36.0 33.0 39.0 12.5 41.0 70-71 32.375167859373235 35.5 33.0 39.0 9.5 41.0 72-73 32.02432965530842 35.0 33.0 38.5 7.5 40.0 74-75 31.624262697928355 35.0 32.0 37.0 4.0 39.5 76-77 31.24316829717149 35.0 32.0 37.0 2.0 39.0 78-79 30.8950232978475 35.0 32.0 36.0 2.0 39.0 80-81 30.53812318057043 35.0 31.5 36.0 2.0 37.5 82-83 30.22696196814035 35.0 31.0 35.5 2.0 37.0 84-85 29.983361972071044 35.0 31.0 35.0 2.0 37.0 86-87 29.747689106312123 35.0 31.0 35.0 2.0 36.0 88-89 29.533874470499615 35.0 31.0 35.0 2.0 36.0 90-91 29.272186155070717 35.0 31.0 35.0 2.0 36.0 92-93 29.072816659104593 35.0 31.0 35.0 2.0 35.0 94-95 28.86019800544266 34.0 30.0 35.0 2.0 35.0 96-97 28.60743643708124 34.0 30.0 35.0 2.0 35.0 98-99 28.375450971170036 34.0 30.0 35.0 2.0 35.0 100-101 27.3284864345229 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 89347.0 3 15780.0 4 10891.0 5 8307.0 6 7716.0 7 7972.0 8 8339.0 9 9124.0 10 9831.0 11 10528.0 12 10949.0 13 11176.0 14 12332.0 15 13488.0 16 13784.0 17 14717.0 18 13141.0 19 12068.0 20 12008.0 21 12336.0 22 13669.0 23 15736.0 24 18456.0 25 21407.0 26 25560.0 27 30324.0 28 36000.0 29 42548.0 30 51126.0 31 62418.0 32 77675.0 33 100979.0 34 144152.0 35 207699.0 36 337160.0 37 620764.0 38 699453.0 39 142150.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.091322747340705 18.798663071782087 13.84623833840665 24.263775842470558 2 15.977452594812917 20.036148266886904 39.301560695150634 24.68483844314954 3 18.859203059211197 24.160106855426505 30.076785387384824 26.903904697977477 4 13.641837477106803 16.436960556230986 36.733336362027494 33.187865604634716 5 14.259678560495601 37.368249229691706 34.31827250251119 14.053799707301495 6 32.74211335779371 35.32363684673943 17.51695066328388 14.417299132182976 7 28.129901379333717 32.37638526451351 21.429084623987528 18.06462873216525 8 26.51902393658665 34.29121254167873 20.473600479368905 18.716163042365718 9 26.885953302737775 15.619427921086906 20.072752858208524 37.4218659179668 10-11 25.391561283255427 25.479732899146452 28.06792485060139 21.060780966996738 12-13 25.8034880548273 23.19100582811221 27.780165437718512 23.225340679341976 14-15 23.354703197987845 24.879227749150342 25.20246227758134 26.563606775280473 16-17 23.254566540289325 27.717023894079617 26.192513519426807 22.835896046204248 18-19 23.216957517237592 27.162433054828313 27.520326946127472 22.100282481806623 20-21 23.734850756019576 26.286917821881346 27.489299163642595 22.488932258456487 22-23 23.82647003236652 25.96164325977204 27.08571661032118 23.126170097540264 24-25 23.591659228669844 26.211235267935685 26.965741371951935 23.23136413144254 26-27 23.21726882358614 26.463392912071775 27.082545615333526 23.236792649008564 28-29 23.27230590411951 26.78584410375188 26.887146958787632 23.054703033340974 30-31 23.93457217675564 26.21649044670819 26.726375517112018 23.122561859424156 32-33 23.542080107142084 26.405951780640684 26.57342906174767 23.47853905046956 34-35 23.894672614544284 26.49290129831796 26.643230533236707 22.969195553901045 36-37 23.8525031374038 26.320712727329408 26.766633238300535 23.060150896966253 38-39 23.718802642284757 26.443027641107165 26.634018213235077 23.204151503373 40-41 23.857162680786974 26.236203294350783 26.66829096297672 23.23834306188552 42-43 23.708504815071375 26.320867799464843 26.390920636214226 23.579706749249553 44-45 23.55752191359492 26.32990569176348 26.655112945825383 23.457459448816227 46-47 23.740498794509488 26.21946530643632 26.37190218305564 23.668133715998554 48-49 23.461474936909205 26.36892213746367 26.526990740119906 23.642612185507218 50-51 23.626074238841056 26.34949928265255 26.606936373012523 23.417490105493872 52-53 23.8312125811398 26.232249568106 26.504227782688357 23.43231006806585 54-55 23.194484076348786 26.131820702605342 26.843157981041305 23.83053724000457 56-57 23.381648302247598 26.24840926962897 26.56514626570528 23.804796162418153 58-59 23.48976551724138 26.148838196286473 26.704246153846157 23.657150132625997 60-61 23.562811528066387 26.21149614961496 26.87134145513317 23.354350867185484 62-63 23.616037391992712 26.12183532726397 26.860317676432345 23.401809604310973 64-65 23.244973311700427 25.968841891963702 26.84516474153153 23.941020054804344 66-67 23.300411188719547 26.064082156942263 26.70312812713834 23.932378527199855 68-69 23.312773463917022 26.044713642030132 26.845991776052237 23.796521118000612 70-71 23.273569649883637 25.900528582562345 26.73744531553378 24.08845645202024 72-73 23.22255269535893 26.16379755897978 26.620094905367058 23.99355484029423 74-75 23.22196103884862 26.277382174265867 26.670979049525243 23.82967773736027 76-77 23.239731377401988 25.908576933665508 26.68984735439058 24.16184433454193 78-79 23.186025266150924 26.014159516197573 26.71062462851261 24.08919058913889 80-81 23.431838070274274 26.127916251957238 26.518243988708356 23.922001689060128 82-83 23.349277406153128 26.176763919172174 26.70544474353258 23.768513931142117 84-85 23.39314646166164 26.21034701303058 26.517677982270833 23.87882854303695 86-87 23.13282075551315 26.454541024140198 26.497111506986602 23.915526713360048 88-89 23.086806903364913 26.13187968591924 26.666605537675323 24.11470787304052 90-91 23.242312363808573 25.963126922047014 26.773759349483605 24.02080136466081 92-93 23.43775391736386 25.86423812776863 26.73967090696459 23.95833704790292 94-95 23.29891430703497 25.856064377012565 26.772472862770712 24.072548453181753 96-97 23.171839115694375 25.678003478434537 26.903811146241154 24.246346259629934 98-99 22.897566908199067 25.666305593531725 26.845841356158772 24.59028614211044 100-101 23.169961474482044 25.716908346289806 26.88897738822972 24.224152790998428 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 157.0 1 126.0 2 124.0 3 154.0 4 146.5 5 160.5 6 253.5 7 488.0 8 737.5 9 863.5 10 773.0 11 615.5 12 644.5 13 728.5 14 796.5 15 900.0 16 1049.5 17 1120.5 18 1222.5 19 1410.0 20 1534.0 21 1741.0 22 1930.5 23 2118.0 24 2523.5 25 3102.5 26 4131.0 27 5788.0 28 8243.0 29 12180.0 30 17795.0 31 25133.5 32 34326.5 33 41823.5 34 48056.5 35 55288.5 36 63949.5 37 72468.5 38 78834.0 39 84794.0 40 89427.5 41 92856.5 42 96722.0 43 101449.0 44 106145.0 45 112255.0 46 116410.5 47 118695.5 48 121397.5 49 122362.5 50 122369.0 51 120383.5 52 117811.0 53 116243.0 54 113376.0 55 107624.5 56 99758.5 57 90117.5 58 80899.5 59 69798.0 60 56495.5 61 46125.0 62 37961.5 63 29330.0 64 21227.0 65 15664.5 66 11956.0 67 9297.5 68 7273.5 69 5572.0 70 4120.5 71 3031.0 72 2248.0 73 1679.5 74 1279.0 75 969.5 76 727.0 77 493.5 78 325.5 79 219.5 80 165.5 81 125.0 82 86.5 83 72.0 84 64.5 85 49.5 86 44.5 87 44.0 88 39.0 89 32.0 90 26.5 91 24.0 92 19.0 93 16.5 94 16.5 95 13.5 96 8.5 97 8.0 98 9.0 99 7.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04689727429924324 2 0.05462312584565036 3 0.04577905894384221 4 0.05303051609704889 5 0.0453385498644418 6 0.017247624724215902 7 0.014604570247813467 8 0.019822908573018275 9 0.02012787639721856 10-11 0.02151717426301984 12-13 0.026295003508824244 14-15 0.04271243804493938 16-17 0.028446720935126228 18-19 0.022889529471921105 20-21 0.026345831479524292 22-23 0.04484721281434135 24-25 0.04025575279443712 26-27 0.030140986625127788 28-29 0.019399342150517886 30-31 0.012469795478411497 32-33 0.009589543805408843 34-35 0.009301518638108576 36-37 0.0015078964641013902 38-39 0.0067770627600062475 40-41 0.0037104418611034213 42-43 0.21046168401199403 44-45 0.18538655179997093 46-47 0.1914350803132765 48-49 0.18889368177827415 50-51 0.1883006887867736 52-53 0.1922822131582773 54-55 0.19052017684067565 56-57 0.20138041991358568 58-59 0.19716169834548178 60-61 0.20232920869998655 62-63 0.19997417939088438 64-65 0.20082131223588515 66-67 0.19133342437187642 68-69 0.18931724820077456 70-71 0.17413662761836055 72-73 0.18143891274226728 74-75 0.18130337148706716 76-77 0.17918553937456522 78-79 0.20481977926428882 80-81 0.21340970631259676 82-83 0.21191875250539538 84-85 0.2066157008956905 86-87 0.22372778436470625 88-89 0.22154218162460426 90-91 0.22081364737790357 92-93 0.2251509675443076 94-95 0.23633312109831792 96-97 0.2368752861191184 98-99 0.22593032976170832 100-101 0.23646866235351802 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2951131.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.39494266336403 #Duplication Level Percentage of deduplicated Percentage of total 1 76.3305943486848 44.573206804519465 2 13.023174550446386 15.209750623365967 3 4.44650142902834 7.789595880020282 4 2.061290722729617 4.814758142652807 5 1.1533877267186603 3.367600508518197 6 0.7067317030658058 2.47617343673456 7 0.44419237839158693 1.815701192737601 8 0.3260056466968924 1.5229664837438353 9 0.2446880373633668 1.2859689521020392 >10 1.1921449941394535 12.066556942941013 >50 0.05063686862444691 2.0352355147163324 >100 0.01867457702910354 1.9483120242151173 >500 0.0012792463472219358 0.5322143540206947 >1k 6.977707345035669E-4 0.5619591397121476 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.388531380003124E-5 0.0 5 0.0 0.0 0.0 6.777062760006248E-5 0.0 6 0.0 0.0 0.0 6.777062760006248E-5 6.777062760006248E-5 7 0.0 0.0 0.0 6.777062760006248E-5 6.777062760006248E-5 8 0.0 0.0 0.0 6.777062760006248E-5 6.777062760006248E-5 9 0.0 0.0 0.0 6.777062760006248E-5 1.0165594140009373E-4 10-11 3.388531380003124E-5 0.0 0.0 6.777062760006248E-5 1.0165594140009373E-4 12-13 3.388531380003124E-5 0.0 0.0 1.3554125520012496E-4 3.0496782420028117E-4 14-15 5.082797070004686E-5 0.0 0.0 1.3554125520012496E-4 4.066237656003749E-4 16-17 6.777062760006248E-5 0.0 0.0 1.5248391210014058E-4 4.743943932004374E-4 18-19 6.777062760006248E-5 0.0 0.0 1.694265690001562E-4 5.082797070004686E-4 20-21 6.777062760006248E-5 3.388531380003124E-5 0.0 1.694265690001562E-4 5.591076777005155E-4 22-23 6.777062760006248E-5 3.388531380003124E-5 0.0 2.8802516730026557E-4 5.929929915005467E-4 24-25 6.777062760006248E-5 3.388531380003124E-5 0.0 4.066237656003749E-4 6.099356484005623E-4 26-27 6.777062760006248E-5 3.388531380003124E-5 0.0 8.47132845000781E-4 6.607636191006093E-4 28-29 6.777062760006248E-5 3.388531380003124E-5 0.0 0.0024058572798022182 6.777062760006248E-4 30-31 6.777062760006248E-5 3.388531380003124E-5 0.0 0.00913209206910842 6.777062760006248E-4 32-33 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.0266846846175246 6.777062760006248E-4 34-35 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.05201395668304795 7.11591589800656E-4 36-37 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.0928288171551856 7.11591589800656E-4 38-39 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.15592327145084378 7.11591589800656E-4 40-41 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.22540510739780784 7.11591589800656E-4 42-43 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.30112184108397766 7.11591589800656E-4 44-45 1.0165594140009373E-4 3.388531380003124E-5 0.0 0.40669153622797494 7.454769036006872E-4 46-47 1.0165594140009373E-4 6.777062760006248E-5 0.0 0.5317283441500903 7.793622174007185E-4 48-49 1.0165594140009373E-4 6.777062760006248E-5 0.0 0.6591879520089078 7.963048743007342E-4 50-51 1.0165594140009373E-4 6.777062760006248E-5 0.0 0.7868169864367254 8.132475312007499E-4 52-53 1.0165594140009373E-4 6.777062760006248E-5 0.0 0.9225784961765506 8.640755019007967E-4 54-55 1.0165594140009373E-4 8.47132845000781E-5 0.0 1.0873119492154024 8.810181588008122E-4 56-57 1.0165594140009373E-4 1.0165594140009373E-4 0.0 1.2806446071014808 8.979608157008279E-4 58-59 1.0165594140009373E-4 1.0165594140009373E-4 0.0 1.4821097402995664 9.318461295008591E-4 60-61 1.0165594140009373E-4 1.0165594140009373E-4 0.0 1.697518680126365 0.0010165594140009373 62-63 1.0165594140009373E-4 1.0165594140009373E-4 0.0 1.923906461624374 0.0010504447278009686 64-65 1.0165594140009373E-4 1.0165594140009373E-4 0.0 2.1816889863581115 0.0010504447278009686 66-67 1.0165594140009373E-4 1.0165594140009373E-4 0.0 2.487978337796594 0.0010504447278009686 68-69 1.0165594140009373E-4 1.3554125520012496E-4 0.0 2.823612370985903 0.0010504447278009686 70-71 1.0165594140009373E-4 1.3554125520012496E-4 0.0 3.1656676711403184 0.0011012726985010152 72-73 1.0165594140009373E-4 1.3554125520012496E-4 0.0 3.526326008570951 0.0011351580123010467 74-75 1.0165594140009373E-4 1.3554125520012496E-4 0.0 3.9208866024585154 0.0011521006692010623 76-77 1.0165594140009373E-4 1.3554125520012496E-4 0.0 4.373001401835432 0.0011521006692010623 78-79 1.0165594140009373E-4 1.3554125520012496E-4 0.0 4.876249139736595 0.0011521006692010623 80-81 1.0165594140009373E-4 1.5248391210014058E-4 0.0 5.399777237947079 0.0011521006692010623 82-83 1.0165594140009373E-4 1.694265690001562E-4 0.0 5.941213724500878 0.0012198712968011247 84-85 1.0165594140009373E-4 1.694265690001562E-4 0.0 6.513096165504005 0.0012368139537011404 86-87 1.0165594140009373E-4 1.694265690001562E-4 0.0 7.144108479088187 0.001253756610601156 88-89 1.0165594140009373E-4 1.694265690001562E-4 0.0 7.829083154898919 0.001253756610601156 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2995 0.0 57.037918 1 GTATCAA 5390 0.0 41.64188 1 TCAACGC 6605 0.0 32.76435 4 ATCAACG 6760 0.0 32.01201 3 CAACGCA 6800 0.0 31.751762 5 TATCAAC 7135 0.0 30.52855 2 AACGCAG 7210 0.0 29.872265 6 GTACATG 9325 0.0 25.49452 1 ACGCAGA 8615 0.0 24.839054 7 TACATGG 9760 0.0 23.97091 2 CGCAGAG 8835 0.0 23.685505 8 ACATGGG 9790 0.0 23.510067 3 CATGGGG 8350 0.0 21.370316 4 GCAGAGT 10135 0.0 19.570555 9 GTATTAG 780 0.0 18.250916 1 CAGAGTA 9435 0.0 18.155975 10-11 ATGGGGG 5720 0.0 18.085304 5 GAGTACT 4150 0.0 17.666008 12-13 AGAGTAC 8655 0.0 17.516935 10-11 GAGTACA 7195 0.0 16.48797 1 >>END_MODULE