Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921366_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2951131 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3180 | 0.0 | 56.93984 | 1 |
GTATCAA | 5920 | 0.0 | 42.627632 | 1 |
TCAACGC | 7485 | 0.0 | 33.162434 | 4 |
CAACGCA | 7650 | 0.0 | 32.566612 | 5 |
ATCAACG | 7625 | 0.0 | 32.553547 | 3 |
TATCAAC | 7750 | 0.0 | 32.089733 | 2 |
AACGCAG | 8110 | 0.0 | 30.832489 | 6 |
ACGCAGA | 9525 | 0.0 | 25.802946 | 7 |
GTACATG | 8950 | 0.0 | 25.700449 | 1 |
CGCAGAG | 9665 | 0.0 | 24.93732 | 8 |
TACATGG | 9085 | 0.0 | 23.926382 | 2 |
ACATGGG | 9400 | 0.0 | 22.417728 | 3 |
GCAGAGT | 10635 | 0.0 | 20.964237 | 9 |
CATGGGG | 7985 | 0.0 | 20.565426 | 4 |
GAGTACT | 4680 | 0.0 | 19.413874 | 12-13 |
TAAGGTG | 1455 | 0.0 | 19.279322 | 5 |
AGAGTAC | 9055 | 0.0 | 18.978573 | 10-11 |
CAGAGTA | 9810 | 0.0 | 18.971708 | 10-11 |
ATGGGGG | 5630 | 0.0 | 18.832119 | 5 |
GTACTTT | 4895 | 0.0 | 18.367323 | 14-15 |