##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921366_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2951131 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42577777807898 33.0 31.0 34.0 29.0 34.0 2 31.55241871675639 34.0 31.0 34.0 29.0 34.0 3 31.62058275284967 34.0 31.0 34.0 28.0 34.0 4 35.11944776426394 37.0 35.0 37.0 33.0 37.0 5 34.858138456069895 37.0 35.0 37.0 32.0 37.0 6 34.81863224641671 37.0 35.0 37.0 32.0 37.0 7 34.689124271338684 37.0 35.0 37.0 32.0 37.0 8 34.65330071758929 37.0 35.0 37.0 32.0 37.0 9 36.2685763525916 39.0 37.0 39.0 32.0 39.0 10-11 36.12338286575553 39.0 37.0 39.0 32.0 39.0 12-13 36.05664082685587 39.0 37.0 39.0 31.5 39.0 14-15 37.285104761530405 40.0 38.0 41.0 31.0 41.0 16-17 37.26537012419984 40.0 38.0 41.0 31.0 41.0 18-19 37.23985160265674 40.0 38.0 41.0 31.0 41.0 20-21 37.205131185298114 40.0 38.0 41.0 31.0 41.0 22-23 37.097829442339226 40.0 38.0 41.0 31.0 41.0 24-25 37.02447400674521 40.0 37.5 41.0 31.0 41.0 26-27 36.88171653511823 40.0 37.0 41.0 30.0 41.0 28-29 36.7270185566144 40.0 37.0 41.0 30.0 41.0 30-31 36.58178474625491 40.0 37.0 41.0 30.0 41.0 32-33 36.5160628247272 40.0 36.5 41.0 30.0 41.0 34-35 36.63387782514568 40.0 37.0 41.0 30.0 41.0 36-37 36.6030359208046 40.0 37.0 41.0 30.0 41.0 38-39 36.51057577586356 40.0 37.0 41.0 30.0 41.0 40-41 36.38160640784838 40.0 36.5 41.0 29.5 41.0 42-43 36.27153572647232 40.0 36.0 41.0 29.0 41.0 44-45 36.125425133618265 40.0 36.0 41.0 28.5 41.0 46-47 35.96001770168793 40.0 36.0 41.0 28.0 41.0 48-49 35.798004561640944 40.0 35.5 41.0 27.5 41.0 50-51 35.646854036638835 40.0 35.0 41.0 27.0 41.0 52-53 35.47924829497572 39.0 35.0 41.0 26.5 41.0 54-55 35.277131547193264 39.0 35.0 41.0 26.0 41.0 56-57 35.024967546340704 39.0 35.0 41.0 26.0 41.0 58-59 34.806798817131465 38.5 35.0 40.5 26.0 41.0 60-61 34.53779635671883 38.0 34.5 40.0 25.0 41.0 62-63 34.24418756741059 37.5 34.0 40.0 24.0 41.0 64-65 33.93587695700394 37.0 34.0 40.0 23.5 41.0 66-67 33.609598828381394 36.5 34.0 39.5 23.0 41.0 68-69 33.25282086766057 36.0 34.0 39.0 22.0 41.0 70-71 32.87448557857987 35.5 33.0 39.0 22.0 40.0 72-73 32.481531317993 35.0 33.0 38.0 20.5 40.0 74-75 32.07256184154482 35.0 33.0 37.0 19.5 39.0 76-77 29.306714103846964 33.0 29.0 34.5 12.0 36.5 78-79 30.964103931679077 34.5 31.5 36.0 15.0 38.0 80-81 31.156062370663996 35.0 32.0 36.0 17.0 37.0 82-83 30.986105327076295 35.0 32.0 35.0 14.5 37.0 84-85 30.75090058692752 35.0 32.0 35.0 11.0 36.5 86-87 30.501199201255382 35.0 32.0 35.0 7.0 36.0 88-89 30.216785530699923 35.0 32.0 35.0 2.0 36.0 90-91 30.027594674719623 34.5 31.0 35.0 2.0 35.5 92-93 29.878921166156296 34.0 31.0 35.0 2.0 35.0 94-95 29.777767913386427 34.0 31.0 35.0 2.0 35.0 96-97 29.587915954933887 34.0 31.0 35.0 2.0 35.0 98-99 29.323809583512222 34.0 31.0 35.0 2.0 35.0 100-101 28.237594501904525 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 53512.0 3 18738.0 4 10249.0 5 7063.0 6 6353.0 7 6495.0 8 6583.0 9 7275.0 10 8018.0 11 8654.0 12 9423.0 13 10291.0 14 11359.0 15 12886.0 16 13762.0 17 15133.0 18 13520.0 19 11897.0 20 11186.0 21 10894.0 22 11390.0 23 12720.0 24 15124.0 25 17955.0 26 21767.0 27 26081.0 28 30714.0 29 37624.0 30 45314.0 31 56460.0 32 72464.0 33 94774.0 34 139248.0 35 205379.0 36 350870.0 37 687283.0 38 764671.0 39 107997.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.94477447938901 20.48071382565513 14.538964974518345 25.035546720437512 2 14.953881916018325 21.44185936186939 37.98774702485836 25.616511697253923 3 17.499214662613298 25.336119318418643 29.995448940192702 27.169217078775354 4 13.222134530400126 17.643259501638603 35.83474161730754 33.29986435065373 5 13.998243605956285 37.7067499829682 34.332995634774434 13.962010776301087 6 32.56502938406805 36.06160302179975 17.2802650140338 14.0931025800984 7 27.796441087232466 32.61219615834769 21.470753874961627 18.120608879458214 8 26.35537004130019 34.965517662032426 20.174844700712555 18.504267595954833 9 26.52820223839606 15.698760915730276 20.07487976643531 37.69815707943836 10-11 25.273264519512185 25.883264565302888 28.014092683442232 20.829378231742695 12-13 25.697154218437223 23.400011351612818 27.864261819019713 23.038572610930245 14-15 23.13224644833066 25.09117760032586 25.276726664422206 26.499849286921272 16-17 23.03728629544433 27.98700969748989 26.20153775281253 22.77416625425325 18-19 23.099756634934103 27.370606840381388 27.553842233564048 21.97579429112046 20-21 23.59979309469645 26.3660756627552 27.583228471606517 22.450902770941834 22-23 23.627318694381323 26.123250750053707 27.161584644755454 23.087845910809516 24-25 23.416948146300733 26.375415442252848 27.06887531039568 23.138761101050736 26-27 23.043988248926357 26.636845637458812 27.159947672853335 23.1592184407615 28-29 23.14768674440352 26.955170363597887 26.924197166426882 22.972945725571712 30-31 23.763151353011978 26.385635652894596 26.768664122971725 23.0825488711217 32-33 23.45164129462644 26.488745509946998 26.595008826751986 23.46460436867457 34-35 23.708538575328262 26.68135767261932 26.6962520142945 22.913851737757916 36-37 23.711365358367097 26.511347602324282 26.84154561608725 22.93574142322138 38-39 23.626430598500573 26.547011732813758 26.703917997373882 23.122639671311788 40-41 23.775454446103968 26.376469531757646 26.632790943355307 23.215285078783083 42-43 23.629155554772353 26.44620397244256 26.388017436983084 23.536623035802002 44-45 23.482861272866305 26.43159631777078 26.582720958576534 23.502821450786385 46-47 23.64309265567223 26.31943516041365 26.37040343046279 23.66706875345133 48-49 23.350626328131312 26.51818085850679 26.518604471078188 23.6125883422837 50-51 23.529838345799053 26.446584576982502 26.53869021245463 23.484886864763816 52-53 23.77380484432818 26.328818602003334 26.38517085270477 23.512205700963715 54-55 23.133538240082462 26.258747378306758 26.72897905644288 23.8787353251679 56-57 23.30415069020029 26.306449945864983 26.497506739343702 23.891892624591023 58-59 23.39897734221826 26.31589203143986 26.57890184169561 23.70622878464627 60-61 23.546438532103874 26.348067871049075 26.72578442436011 23.379709172486944 62-63 23.48164532926768 26.25155033577405 26.732372603874406 23.53443173108387 64-65 23.11258316308354 26.123707957453313 26.675913882925766 24.08779499653738 66-67 23.220543262841446 26.281839526903056 26.490601637249522 24.007015573005976 68-69 23.15904858310916 26.193029186200594 26.617068581309354 24.030853649380887 70-71 23.18427890072716 26.045566698888145 26.50751526621875 24.26263913416594 72-73 23.144672420776484 26.348846155801592 26.32437452442164 24.18210689900029 74-75 23.08621655634728 26.371835018826435 26.37891886890234 24.163029555923945 76-77 23.09879993926839 25.979509534489477 26.52009900475561 24.401591521486527 78-79 23.00617199807672 26.13591280942218 26.53879488363671 24.319120308864388 80-81 23.267501371840595 26.223964059047884 26.302146682603805 24.206387886507716 82-83 23.16540747266945 26.234634588019617 26.459749089857187 24.140208849453746 84-85 23.142683302996097 26.23813203984855 26.28902741197965 24.3301572451757 86-87 22.846224307046082 26.501458091773472 26.248568445191587 24.40374915598886 88-89 22.79209872868824 26.183022211304767 26.41089580278725 24.613983257219747 90-91 22.82053997147632 26.027643594418524 26.48774129421897 24.664075139886187 92-93 22.98831831069286 25.89877338363519 26.49974115652013 24.613167149151817 94-95 22.8273256741906 25.908366805230663 26.48913938169078 24.775168138887956 96-97 22.60594801334131 25.764326288771244 26.618305197784764 25.011420500102684 98-99 22.35194055088027 25.76257287549198 26.503585957076947 25.381900616550805 100-101 22.36843933311443 25.87461721783571 26.50597694208684 25.250966506963017 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 177.0 1 128.0 2 89.5 3 109.0 4 119.5 5 128.0 6 187.5 7 406.5 8 616.5 9 688.0 10 597.5 11 465.5 12 448.5 13 481.5 14 544.5 15 595.5 16 653.5 17 703.5 18 810.5 19 949.0 20 1049.5 21 1228.0 22 1488.0 23 1816.0 24 2211.5 25 2888.0 26 4075.5 27 5954.0 28 8886.0 29 13225.0 30 19019.0 31 26481.5 32 35863.5 33 43175.5 34 48860.5 35 55505.5 36 63830.5 37 72319.5 38 78513.5 39 84633.0 40 89355.5 41 93097.0 42 97487.0 43 101590.5 44 105971.0 45 112012.0 46 116532.0 47 119113.5 48 121915.5 49 123319.5 50 122994.0 51 121336.0 52 119213.5 53 117388.5 54 114125.0 55 107569.5 56 99330.0 57 89973.0 58 80357.0 59 69314.0 60 56155.5 61 45506.0 62 37561.5 63 28832.0 64 20527.0 65 15012.5 66 11385.5 67 8752.0 68 6830.0 69 5230.5 70 3842.0 71 2853.5 72 2046.0 73 1453.0 74 1130.0 75 802.0 76 523.5 77 330.5 78 207.0 79 117.5 80 65.5 81 37.0 82 24.5 83 20.5 84 16.5 85 11.5 86 6.5 87 6.0 88 5.5 89 2.0 90 2.5 91 3.0 92 1.5 93 1.5 94 0.5 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14587627590913452 2 3.727384518003436E-4 3 0.005760503346005311 4 0.004743943932004374 5 0.026023920998423995 6 0.001423183179601312 7 1.694265690001562E-4 8 0.0018636922590017182 9 0.0 10-11 0.09943645334619168 12-13 2.8802516730026557E-4 14-15 0.005404707551104984 16-17 2.2025453970020306E-4 18-19 3.049678242002812E-4 20-21 7.624195605007029E-4 22-23 3.049678242002812E-4 24-25 0.0019992335142018434 26-27 0.0027616530747025464 28-29 0.006522922906506014 30-31 0.014790939473713637 32-33 0.01497730869961381 34-35 0.01172431857481081 36-37 7.793622174007185E-4 38-39 2.0331188280018746E-4 40-41 0.00503196909930464 42-43 0.009369289265708639 44-45 0.008657697675907981 46-47 0.009335403951908607 48-49 0.010894128386710044 50-51 0.0058113313167053576 52-53 0.0017281510038015934 54-55 0.0011012726985010154 56-57 0.005963815228805498 58-59 0.009843683658909076 60-61 0.00816636062580753 62-63 0.01899271838491751 64-65 0.03571512074523293 66-67 0.03803626474053507 68-69 0.027633473403925475 70-71 0.0418653051999386 72-73 0.026295003508824244 74-75 0.02568506786042368 76-77 0.23821375601421965 78-79 0.06794005416906264 80-81 0.05511446289575082 82-83 0.02143246097851976 84-85 0.032563786561830024 86-87 0.08179914751327542 88-89 0.2654067203387447 90-91 0.31731902108039256 92-93 0.04987918191364599 94-95 0.005015026442404624 96-97 0.01006393819860928 98-99 0.0012198712968011249 100-101 0.0013554125520012497 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2951131.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.8950011744648 #Duplication Level Percentage of deduplicated Percentage of total 1 75.88664192210518 43.93457223206469 2 13.387698516854938 15.501616427133946 3 4.4571322225263135 7.741370257737174 4 2.055445928646566 4.760001778121673 5 1.124347975759 3.2547063688537214 6 0.7153252944046088 2.4848255255807525 7 0.47867290605361196 1.939893792071084 8 0.32864421788131887 1.5221485904176018 9 0.23865975054276783 1.2435485884173918 >10 1.2528641228068231 12.458609208610719 >50 0.05365284022037765 2.1174331983066423 >100 0.01879992722322271 1.924708932438068 >500 0.00146831595534766 0.5974373059393381 >1k 6.46059019990044E-4 0.5191277943072641 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.388531380003124E-5 2 0.0 0.0 0.0 0.0 3.388531380003124E-5 3 0.0 0.0 0.0 0.0 3.388531380003124E-5 4 0.0 0.0 0.0 0.0 3.388531380003124E-5 5 3.388531380003124E-5 3.388531380003124E-5 0.0 0.0 6.777062760006248E-5 6 3.388531380003124E-5 3.388531380003124E-5 0.0 0.0 6.777062760006248E-5 7 3.388531380003124E-5 3.388531380003124E-5 0.0 0.0 6.777062760006248E-5 8 3.388531380003124E-5 3.388531380003124E-5 0.0 0.0 6.777062760006248E-5 9 3.388531380003124E-5 3.388531380003124E-5 0.0 0.0 6.777062760006248E-5 10-11 3.388531380003124E-5 3.388531380003124E-5 0.0 3.388531380003124E-5 6.777062760006248E-5 12-13 3.388531380003124E-5 3.388531380003124E-5 0.0 8.47132845000781E-5 1.694265690001562E-4 14-15 3.388531380003124E-5 3.388531380003124E-5 0.0 1.0165594140009373E-4 1.694265690001562E-4 16-17 3.388531380003124E-5 3.388531380003124E-5 0.0 1.1859859830010934E-4 2.0331188280018746E-4 18-19 3.388531380003124E-5 3.388531380003124E-5 0.0 1.694265690001562E-4 2.0331188280018746E-4 20-21 3.388531380003124E-5 6.777062760006248E-5 0.0 1.694265690001562E-4 2.371971966002187E-4 22-23 3.388531380003124E-5 6.777062760006248E-5 0.0 2.710825104002499E-4 2.371971966002187E-4 24-25 6.777062760006248E-5 6.777062760006248E-5 0.0 3.727384518003437E-4 2.371971966002187E-4 26-27 6.777062760006248E-5 6.777062760006248E-5 0.0 8.132475312007499E-4 2.371971966002187E-4 28-29 6.777062760006248E-5 6.777062760006248E-5 0.0 0.0024058572798022182 2.371971966002187E-4 30-31 6.777062760006248E-5 6.777062760006248E-5 0.0 0.008996550813908296 2.371971966002187E-4 32-33 6.777062760006248E-5 6.777062760006248E-5 0.0 0.026583028676124512 2.710825104002499E-4 34-35 6.777062760006248E-5 6.777062760006248E-5 0.0 0.051929243398547875 3.388531380003124E-4 36-37 6.777062760006248E-5 6.777062760006248E-5 0.0 0.09308295700868582 3.388531380003124E-4 38-39 6.777062760006248E-5 1.0165594140009372E-4 0.0 0.1565162644423443 3.388531380003124E-4 40-41 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.2260319857031084 3.388531380003124E-4 42-43 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.30195203127207837 3.388531380003124E-4 44-45 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.4080300061230762 3.557957949003281E-4 46-47 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.5324399357398909 4.235664225003905E-4 48-49 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.6591540666951077 5.421650208004998E-4 50-51 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.7867153304953254 5.760503346005311E-4 52-53 6.777062760006248E-5 1.3554125520012496E-4 0.0 0.9220532738126501 5.929929915005467E-4 54-55 6.777062760006248E-5 1.3554125520012496E-4 0.0 1.0862106765169015 6.099356484005623E-4 56-57 6.777062760006248E-5 1.3554125520012496E-4 0.0 1.2794247358046795 6.099356484005623E-4 58-59 6.777062760006248E-5 1.3554125520012496E-4 0.0 1.479534456450764 6.099356484005623E-4 60-61 6.777062760006248E-5 1.3554125520012496E-4 0.0 1.6950111669051628 6.099356484005623E-4 62-63 6.777062760006248E-5 1.3554125520012496E-4 0.0 1.922008884051572 6.438209622005936E-4 64-65 6.777062760006248E-5 1.3554125520012496E-4 0.0 2.18051994303201 6.438209622005936E-4 66-67 6.777062760006248E-5 1.3554125520012496E-4 0.0 2.4853522259770915 6.438209622005936E-4 68-69 6.777062760006248E-5 1.3554125520012496E-4 0.0 2.8199527570955 6.438209622005936E-4 70-71 6.777062760006248E-5 1.3554125520012496E-4 0.0 3.1609067845514147 6.438209622005936E-4 72-73 6.777062760006248E-5 1.3554125520012496E-4 0.0 3.522734165308148 6.946489329006405E-4 74-75 6.777062760006248E-5 1.694265690001562E-4 0.0 3.919293992709914 7.963048743007342E-4 76-77 6.777062760006248E-5 1.694265690001562E-4 0.0 4.372950573864732 8.132475312007499E-4 78-79 6.777062760006248E-5 1.694265690001562E-4 0.0 4.878858308899199 8.132475312007499E-4 80-81 6.777062760006248E-5 1.694265690001562E-4 0.0 5.405283601439583 8.132475312007499E-4 82-83 6.777062760006248E-5 1.694265690001562E-4 0.0 5.949210658557686 9.149034726008436E-4 84-85 6.777062760006248E-5 1.694265690001562E-4 0.0 6.526819717593018 9.149034726008436E-4 86-87 6.777062760006248E-5 1.694265690001562E-4 0.0 7.164592151280306 9.149034726008436E-4 88-89 6.777062760006248E-5 1.694265690001562E-4 0.0 7.857072424097744 9.149034726008436E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3180 0.0 56.93984 1 GTATCAA 5920 0.0 42.627632 1 TCAACGC 7485 0.0 33.162434 4 CAACGCA 7650 0.0 32.566612 5 ATCAACG 7625 0.0 32.553547 3 TATCAAC 7750 0.0 32.089733 2 AACGCAG 8110 0.0 30.832489 6 ACGCAGA 9525 0.0 25.802946 7 GTACATG 8950 0.0 25.700449 1 CGCAGAG 9665 0.0 24.93732 8 TACATGG 9085 0.0 23.926382 2 ACATGGG 9400 0.0 22.417728 3 GCAGAGT 10635 0.0 20.964237 9 CATGGGG 7985 0.0 20.565426 4 GAGTACT 4680 0.0 19.413874 12-13 TAAGGTG 1455 0.0 19.279322 5 AGAGTAC 9055 0.0 18.978573 10-11 CAGAGTA 9810 0.0 18.971708 10-11 ATGGGGG 5630 0.0 18.832119 5 GTACTTT 4895 0.0 18.367323 14-15 >>END_MODULE