##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921364_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2366578 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.45929988362944 31.0 31.0 34.0 26.0 34.0 2 30.511254647005085 33.0 31.0 34.0 26.0 34.0 3 30.555043188942008 33.0 31.0 34.0 26.0 34.0 4 34.01798673020708 37.0 35.0 37.0 30.0 37.0 5 34.01822927450522 37.0 35.0 37.0 30.0 37.0 6 34.06843298636259 37.0 35.0 37.0 30.0 37.0 7 33.989694402635365 37.0 35.0 37.0 30.0 37.0 8 33.95874507411123 37.0 35.0 37.0 30.0 37.0 9 35.51848407278357 39.0 37.0 39.0 30.0 39.0 10-11 35.41625587662862 39.0 37.0 39.0 30.0 39.0 12-13 35.30639007038855 39.0 35.0 39.0 29.0 39.0 14-15 36.440642353643106 40.0 37.0 41.0 29.0 41.0 16-17 36.393643902715226 40.0 37.0 41.0 29.0 41.0 18-19 36.35158063668301 40.0 37.0 41.0 28.0 41.0 20-21 36.29274716489378 40.0 37.0 41.0 28.0 41.0 22-23 36.17890937885842 40.0 36.5 41.0 27.0 41.0 24-25 36.0824671741223 40.0 36.0 41.0 27.0 41.0 26-27 35.93489544819566 40.0 36.0 41.0 27.0 41.0 28-29 35.79401059250952 40.0 36.0 41.0 27.0 41.0 30-31 35.65139813688795 40.0 36.0 41.0 26.5 41.0 32-33 35.4754476717015 39.5 35.5 41.0 25.5 41.0 34-35 35.310645370657554 39.0 35.0 41.0 25.0 41.0 36-37 35.14385264293 39.0 35.0 41.0 24.5 41.0 38-39 35.37552829444033 39.5 35.0 41.0 25.0 41.0 40-41 35.50494025550816 40.0 35.0 41.0 25.0 41.0 42-43 35.340600647855254 40.0 35.0 41.0 24.0 41.0 44-45 35.216929253969234 40.0 35.0 41.0 24.0 41.0 46-47 35.06206788874062 40.0 35.0 41.0 23.5 41.0 48-49 34.91839123831963 40.0 35.0 41.0 23.0 41.0 50-51 33.20262843650199 37.0 32.5 39.5 18.5 40.0 52-53 33.363422418361026 37.5 33.5 39.5 19.5 40.0 54-55 34.22646792119254 39.0 34.0 40.5 20.0 41.0 56-57 34.245111084443444 39.0 34.0 41.0 20.0 41.0 58-59 34.07114428512392 38.5 34.0 41.0 19.5 41.0 60-61 33.82815609711575 38.0 34.0 40.5 18.0 41.0 62-63 33.5405900418241 37.5 34.0 40.0 16.0 41.0 64-65 33.252471289769446 37.0 33.5 40.0 13.5 41.0 66-67 32.91180430140059 36.0 33.0 39.5 12.0 41.0 68-69 32.5470238039904 36.0 33.0 39.0 8.0 41.0 70-71 32.17011334509152 35.0 33.0 39.0 7.0 40.5 72-73 31.81291954036588 35.0 32.0 37.5 2.0 40.0 74-75 31.415827198596453 35.0 32.0 37.0 2.0 39.0 76-77 31.042296725482956 35.0 32.0 36.5 2.0 39.0 78-79 30.699130558975874 35.0 32.0 36.0 2.0 38.5 80-81 30.356351237947788 35.0 31.0 36.0 2.0 37.0 82-83 30.059390816613693 35.0 31.0 35.0 2.0 37.0 84-85 29.826821258373904 35.0 31.0 35.0 2.0 36.5 86-87 29.60570177699615 35.0 31.0 35.0 2.0 36.0 88-89 29.409344420509278 35.0 31.0 35.0 2.0 36.0 90-91 29.16839313979932 35.0 31.0 35.0 2.0 35.5 92-93 28.98171389237963 34.5 30.0 35.0 2.0 35.0 94-95 28.77864219983453 34.0 30.0 35.0 2.0 35.0 96-97 28.53592338811567 34.0 30.0 35.0 2.0 35.0 98-99 28.315449564730173 34.0 30.0 35.0 2.0 35.0 100-101 27.27254626722635 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 79946.0 3 13630.0 4 9353.0 5 7108.0 6 6359.0 7 6604.0 8 6987.0 9 7292.0 10 8112.0 11 8667.0 12 8753.0 13 8723.0 14 9557.0 15 10393.0 16 10634.0 17 11497.0 18 10493.0 19 9329.0 20 9385.0 21 10016.0 22 10780.0 23 12433.0 24 14296.0 25 17308.0 26 20534.0 27 24433.0 28 28686.0 29 34006.0 30 41070.0 31 49889.0 32 62329.0 33 81895.0 34 115421.0 35 167790.0 36 277722.0 37 509869.0 38 546565.0 39 98712.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.55070539952347 18.606846509866124 13.71656686964271 24.125881220967692 2 15.956859412587884 19.58829572695103 39.64008641646479 24.814758443996297 3 19.2857553523749 24.10022946600538 29.222208318607713 27.391806863012008 4 13.562285758737492 16.01898936467055 36.78020431873181 33.638520557860154 5 14.496615923127978 37.207343932969486 33.97579359878925 14.320246545113275 6 33.057795704605184 35.129969968243934 17.469260346502058 14.342973980648832 7 29.037757482040018 31.90311351418056 20.900984814259626 18.1581441895198 8 26.93535612581368 34.371806456357334 19.9022696401085 18.790567777720486 9 27.03052577259024 16.061458121574795 19.50717193152104 37.400844174313924 10-11 25.753978492987624 25.38706134720277 27.52121612863211 21.337744031177497 12-13 26.314357983487007 22.79837892132798 27.498065792023564 23.38919730316145 14-15 23.680261889981434 24.36054090054695 24.842305681899123 27.11689152757249 16-17 23.70049061616022 27.440691237276262 25.60046324816851 23.25835489839501 18-19 23.652123783355883 26.82373521631318 26.963039884836963 22.56110111549397 20-21 24.209653184443493 25.918413494762156 27.0199348677384 22.851998453055955 22-23 24.229856029267193 25.542846791745816 26.670846164398416 23.556451014588575 24-25 23.933292780204436 25.880413641914746 26.566068698240336 23.62022487964048 26-27 23.605180418792997 26.162864789091373 26.620582149361095 23.61137264275454 28-29 23.766318457856336 26.307579236628577 26.496983021492248 23.42911928402284 30-31 24.18685181792614 25.90970262836438 26.356035830901774 23.547409722807704 32-33 23.855379987685694 25.97767535105709 26.305246934840238 23.86169772641698 34-35 24.16850335569477 26.09256321073315 26.300731865376665 23.438201568195414 36-37 24.201525178287486 25.915924620849907 26.392505861926026 23.490044338936585 38-39 24.0326155189306 26.09374626941673 26.29707032079477 23.5765678908579 40-41 24.13986974366017 25.904975200587366 26.3662918143451 23.58886324140736 42-43 23.99428730632012 25.879090914479807 26.160830195134306 23.96579158406577 44-45 23.8612768735102 25.929796890087147 26.326039223355714 23.882887013046936 46-47 24.12446239011528 25.862551787185755 26.08886705417406 23.924118768524906 48-49 23.895881676488226 26.05663152551894 26.1110926493146 23.936394148678232 50-51 23.882435315039814 26.120379789328595 26.21907777180891 23.778107123822682 52-53 24.199216319121355 25.895441764535054 26.165890408291304 23.739451508052287 54-55 23.655562566423622 25.792739031384016 26.45068348202559 24.10101492016677 56-57 23.75049720159384 25.9457202982511 26.243861319970474 24.05992118018459 58-59 23.89273079164459 25.89388360943312 26.32222125083905 23.891164348083237 60-61 23.94715517029688 25.917426143152177 26.438884405745462 23.696534280805476 62-63 23.91596703050358 25.801571252177443 26.493399771337995 23.789061945980983 64-65 23.650685286736586 25.68117469863578 26.467934042276198 24.20020597235144 66-67 23.7593477280761 25.75155416231868 26.334907427594135 24.154190682011087 68-69 23.755871843788054 25.79682769624335 26.406549075628437 24.040751384340155 70-71 23.737891600419797 25.612253125787674 26.393861416270326 24.255993857522196 72-73 23.709726883468683 25.9064394445264 26.148606733825304 24.235226938179615 74-75 23.679991500235882 26.022590832234 26.25533960219157 24.04207806533855 76-77 23.727949771330962 25.607228519406867 26.386495859957066 24.278325849305105 78-79 23.660952349500363 25.67862941066513 26.376570812716764 24.283847427117742 80-81 23.837894542956317 25.92171437826371 26.149836609436743 24.090554469343232 82-83 23.85980177645389 25.86416087376719 26.273839805820103 24.002197543958818 84-85 23.785401059941258 25.924484795469954 26.18580769395244 24.10430645063635 86-87 23.607882428842363 26.12508652068588 26.18272110177331 24.084309948698447 88-89 23.564626530187052 25.791073040759255 26.2950798568353 24.349220572218393 90-91 23.70014147745486 25.791115588478036 26.315420619121603 24.193322314945497 92-93 23.856520738434668 25.622104340199808 26.38919149885841 24.132183422507108 94-95 23.736691398849974 25.631649006569223 26.341956351134037 24.289703243446763 96-97 23.65787811364633 25.444501078601885 26.506712700566272 24.39090810718552 98-99 23.40668987617034 25.474286532206257 26.437787251486306 24.681236340137097 100-101 23.662558019717864 25.48170739067284 26.50715739752329 24.348577192086005 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 52.0 2 64.0 3 81.0 4 85.0 5 110.0 6 155.0 7 339.0 8 569.0 9 632.0 10 558.5 11 471.5 12 472.5 13 513.5 14 598.5 15 679.0 16 732.0 17 788.5 18 890.0 19 1003.5 20 1097.0 21 1205.5 22 1327.0 23 1521.0 24 1733.0 25 2064.0 26 2578.0 27 3379.5 28 4456.0 29 6181.5 30 9127.0 31 13261.5 32 18946.5 33 24538.5 34 30083.0 35 36659.0 36 45089.5 37 53609.5 38 60089.0 39 65739.0 40 70100.0 41 73576.5 42 76952.5 43 81465.5 44 86223.0 45 91101.0 46 94713.0 47 97840.5 48 102146.5 49 103908.0 50 102439.0 51 100828.0 52 99725.0 53 98542.5 54 96491.5 55 91730.5 56 84390.0 57 75401.5 58 67606.0 59 58950.0 60 48508.0 61 40279.0 62 33365.0 63 25452.0 64 18281.5 65 13509.5 66 10080.5 67 7689.5 68 5971.5 69 4542.5 70 3498.0 71 2615.5 72 1866.0 73 1372.0 74 1045.5 75 769.0 76 556.5 77 375.5 78 235.5 79 169.0 80 124.5 81 100.5 82 81.0 83 65.0 84 50.0 85 43.0 86 47.5 87 37.5 88 29.5 89 27.5 90 27.0 91 29.5 92 20.5 93 15.5 94 13.5 95 9.5 96 12.0 97 10.0 98 5.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04690316566789685 2 0.05442457421644247 3 0.04588904316696935 4 0.05298790067346185 5 0.04597355337537998 6 0.01757812334940999 7 0.014578010950832805 8 0.02011342960172874 9 0.02024019491434468 10-11 0.021655740905222647 12-13 0.02630380236780702 14-15 0.042445252174236385 16-17 0.02854332289068858 18-19 0.02286001137507405 20-21 0.026324929919909677 22-23 0.04489604821814451 24-25 0.04043813472448404 26-27 0.029895486225258578 28-29 0.01981764387229155 30-31 0.012528638396875149 32-33 0.009507398446195308 34-35 0.00961303620670859 36-37 0.0014789286471859368 38-39 0.0066974340165420285 40-41 0.00382408693058078 42-43 0.20366960226960618 44-45 0.18004899901883648 46-47 0.1853520145966032 48-49 0.18349279001156946 50-51 0.18258430527115524 52-53 0.18558441766973244 54-55 0.18476044313772882 56-57 0.19473264773018256 58-59 0.19181704554001602 60-61 0.19623270392947115 62-63 0.19338048439561256 64-65 0.1948171579385932 66-67 0.18478157068983148 68-69 0.18387308594941726 70-71 0.16959086072802165 72-73 0.1758446161504079 74-75 0.17576010594199726 76-77 0.17335156500229446 78-79 0.19874688262968726 80-81 0.20728241367916037 82-83 0.20495838294786817 84-85 0.20066948987102895 86-87 0.2175504040010513 88-89 0.21558554165550425 90-91 0.2142756334251396 92-93 0.2187758020230054 94-95 0.22889589948017772 96-97 0.22900153724069097 98-99 0.21926173572136645 100-101 0.22900153724069097 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2366578.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.20652129621573 #Duplication Level Percentage of deduplicated Percentage of total 1 78.44064530142359 46.441977365276394 2 11.804472253276394 13.978034757083929 3 3.9713409952838306 7.0538785563542 4 1.8209995272410961 4.312601891599949 5 1.0109552681897154 2.992757230779793 6 0.6524729036032199 2.317839051743265 7 0.4386579510649256 1.8179987925035914 8 0.3097621380414273 1.4671950898168866 9 0.23661045454368124 1.2607993724262971 >10 1.2272619871946748 12.955499812336912 >50 0.06444353384597226 2.593543814762481 >100 0.020945795387288423 2.1155406137401433 >500 0.0011455127234668207 0.47127689574667003 >1k 2.863781808659397E-4 0.22105675582964798 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 4.225510420531248E-5 9 0.0 0.0 0.0 0.0 4.225510420531248E-5 10-11 0.0 0.0 0.0 0.0 4.225510420531248E-5 12-13 0.0 0.0 0.0 4.225510420531248E-5 4.225510420531248E-5 14-15 0.0 0.0 0.0 4.225510420531248E-5 1.690204168212499E-4 16-17 0.0 0.0 0.0 4.225510420531248E-5 2.1127552102656242E-4 18-19 0.0 0.0 0.0 4.225510420531248E-5 2.9578572943718737E-4 20-21 0.0 0.0 0.0 8.451020841062496E-5 2.9578572943718737E-4 22-23 2.112755210265624E-5 0.0 0.0 2.9578572943718737E-4 3.591683857451561E-4 24-25 4.225510420531248E-5 0.0 0.0 6.338265630796872E-4 4.648061462584373E-4 26-27 4.225510420531248E-5 0.0 0.0 0.0011831429177487495 4.648061462584373E-4 28-29 4.225510420531248E-5 0.0 0.0 0.0023874133876001552 4.648061462584373E-4 30-31 4.225510420531248E-5 0.0 0.0 0.007901704486393433 4.648061462584373E-4 32-33 4.225510420531248E-5 0.0 0.0 0.02381075121969358 5.070612504637497E-4 34-35 4.225510420531248E-5 0.0 0.0 0.04455800738450201 5.493163546690622E-4 36-37 4.225510420531248E-5 0.0 0.0 0.075657764079612 5.493163546690622E-4 38-39 4.225510420531248E-5 0.0 0.0 0.12621599626126837 5.704439067717185E-4 40-41 4.225510420531248E-5 0.0 0.0 0.1859647136075802 6.12699010977031E-4 42-43 4.225510420531248E-5 0.0 0.0 0.2502347271038605 6.760816672849996E-4 44-45 4.225510420531248E-5 0.0 0.0 0.3312166343133419 7.394643235929684E-4 46-47 4.225510420531248E-5 0.0 0.0 0.4253610064827781 7.605918756956247E-4 48-49 4.225510420531248E-5 0.0 0.0 0.5233505931348977 8.451020841062497E-4 50-51 4.225510420531248E-5 0.0 0.0 0.626157261666423 8.451020841062497E-4 52-53 4.225510420531248E-5 0.0 0.0 0.7339289049420725 9.507398446195308E-4 54-55 4.225510420531248E-5 0.0 0.0 0.8643492840717695 0.0010775051572354682 56-57 4.225510420531248E-5 0.0 0.0 1.0171226133260767 0.0010986327093381245 58-59 4.225510420531248E-5 0.0 0.0 1.17813568790042 0.0010986327093381245 60-61 4.225510420531248E-5 0.0 0.0 1.3507900436833267 0.0010986327093381245 62-63 4.225510420531248E-5 2.112755210265624E-5 0.0 1.5289586905650268 0.0011831429177487495 64-65 4.225510420531248E-5 4.225510420531248E-5 0.0 1.731276129500063 0.0011831429177487495 66-67 4.225510420531248E-5 4.225510420531248E-5 0.0 1.9687709426860218 0.0011831429177487495 68-69 4.225510420531248E-5 4.225510420531248E-5 0.0 2.2270552671409947 0.0011831429177487495 70-71 4.225510420531248E-5 4.225510420531248E-5 0.0 2.4996851994736704 0.0012042704698514057 72-73 4.225510420531248E-5 4.225510420531248E-5 0.0 2.7816535098357207 0.0014366735429806243 74-75 4.225510420531248E-5 4.225510420531248E-5 0.0 3.0850451580298643 0.0014366735429806243 76-77 4.225510420531248E-5 4.225510420531248E-5 0.0 3.4313257369923997 0.0014578010950832805 78-79 4.225510420531248E-5 6.338265630796872E-5 0.0 3.8199670579207616 0.0014789286471859368 80-81 4.225510420531248E-5 8.451020841062496E-5 0.0 4.226059736885917 0.0015423113034939056 82-83 4.225510420531248E-5 8.451020841062496E-5 0.0 4.65241373831752 0.0016479490640071868 84-85 4.225510420531248E-5 8.451020841062496E-5 0.0 5.101226327634247 0.0016479490640071868 86-87 4.225510420531248E-5 8.451020841062496E-5 0.0 5.593350398761418 0.0016479490640071868 88-89 4.225510420531248E-5 8.451020841062496E-5 0.0 6.1253210331542 0.0016479490640071868 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2280 0.0 53.916386 1 GTATCAA 4485 0.0 43.494587 1 TCAACGC 5625 0.0 34.51093 4 CAACGCA 5690 0.0 33.94771 5 TATCAAC 5765 0.0 33.426567 2 ATCAACG 5875 0.0 33.04168 3 AACGCAG 6115 0.0 31.732119 6 GTACATG 8285 0.0 26.810764 1 ACGCAGA 7045 0.0 26.673391 7 CGCAGAG 7245 0.0 25.807161 8 TACATGG 8675 0.0 25.551266 2 ACATGGG 8845 0.0 24.307878 3 CATGGGG 7120 0.0 22.531626 4 GCAGAGT 7995 0.0 22.31829 9 GTATAGG 750 0.0 21.516592 1 ATGGGGG 4425 0.0 21.34362 5 TAAGGTA 605 0.0 19.61284 4 GAGTACA 6435 0.0 19.398272 1 AGAGTAC 6830 0.0 19.315931 10-11 CAGAGTA 7405 0.0 18.520998 10-11 >>END_MODULE