##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921364_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2366578 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.271510594622278 33.0 31.0 34.0 28.0 34.0 2 31.40710426615983 34.0 31.0 34.0 28.0 34.0 3 31.478933295247398 34.0 31.0 34.0 28.0 34.0 4 34.974011420709566 37.0 35.0 37.0 32.0 37.0 5 34.70144022297173 37.0 35.0 37.0 32.0 37.0 6 34.655598082970435 37.0 35.0 37.0 32.0 37.0 7 34.52211758919419 37.0 35.0 37.0 31.0 37.0 8 34.48057828645411 37.0 35.0 37.0 31.0 37.0 9 36.08035906697349 39.0 37.0 39.0 31.0 39.0 10-11 35.927584681341585 39.0 37.0 39.0 31.0 39.0 12-13 35.85938599953181 39.0 37.0 39.0 30.0 39.0 14-15 37.07756093397302 40.0 38.0 41.0 31.0 41.0 16-17 37.0538152556138 40.0 38.0 41.0 31.0 41.0 18-19 37.021770252237616 40.0 38.0 41.0 31.0 41.0 20-21 36.983847986417516 40.0 38.0 41.0 31.0 41.0 22-23 36.871158694114456 40.0 37.0 41.0 30.0 41.0 24-25 36.79881140617381 40.0 37.0 41.0 30.0 41.0 26-27 36.65740765780802 40.0 37.0 41.0 30.0 41.0 28-29 36.504235862921064 40.0 37.0 41.0 30.0 41.0 30-31 36.36353840862207 40.0 36.5 41.0 29.5 41.0 32-33 36.31332730212146 40.0 36.5 41.0 29.5 41.0 34-35 36.44584142166453 40.0 37.0 41.0 30.0 41.0 36-37 36.41979051609539 40.0 37.0 41.0 30.0 41.0 38-39 36.33447957346007 40.0 37.0 41.0 29.0 41.0 40-41 36.20734135954953 40.0 36.0 41.0 28.5 41.0 42-43 36.100365379886064 40.0 36.0 41.0 28.0 41.0 44-45 35.957719965283204 40.0 36.0 41.0 28.0 41.0 46-47 35.7991228262918 40.0 35.5 41.0 27.0 41.0 48-49 35.63661117444682 40.0 35.0 41.0 27.0 41.0 50-51 35.48286386504058 39.5 35.0 41.0 26.0 41.0 52-53 35.31286017194447 39.0 35.0 41.0 26.0 41.0 54-55 35.105094571148726 39.0 35.0 41.0 26.0 41.0 56-57 34.8396968111763 39.0 35.0 41.0 25.0 41.0 58-59 34.61526452962886 38.5 35.0 40.0 24.5 41.0 60-61 34.340821008223685 38.0 34.0 40.0 23.5 41.0 62-63 34.03989114240055 37.5 34.0 40.0 23.0 41.0 64-65 33.72184119855758 37.0 34.0 40.0 22.5 41.0 66-67 33.38660504745671 36.0 34.0 39.0 22.0 41.0 68-69 33.020993603422326 36.0 33.5 39.0 21.5 41.0 70-71 32.64316113814968 35.0 33.0 38.5 20.5 40.0 72-73 32.24912658699607 35.0 33.0 37.5 19.5 40.0 74-75 31.83942173044793 35.0 32.5 37.0 18.0 39.0 76-77 29.102047344308957 33.0 28.5 34.5 10.5 36.5 78-79 30.752549884263267 34.5 31.5 36.0 11.5 37.0 80-81 30.952711890332793 35.0 32.0 35.5 12.5 37.0 82-83 30.791709590810022 35.0 32.0 35.0 9.5 37.0 84-85 30.56702187715765 35.0 32.0 35.0 7.0 36.0 86-87 30.325233945384433 35.0 32.0 35.0 2.0 36.0 88-89 30.04902711848078 35.0 31.0 35.0 2.0 36.0 90-91 29.8692992582539 34.0 31.0 35.0 2.0 35.0 92-93 29.72637538251433 34.0 31.0 35.0 2.0 35.0 94-95 29.630066281356456 34.0 31.0 35.0 2.0 35.0 96-97 29.440547068383125 34.0 31.0 35.0 2.0 35.0 98-99 29.17715367927869 34.0 31.0 35.0 2.0 35.0 100-101 28.08576433990344 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 50251.0 3 16536.0 4 8683.0 5 6237.0 6 5427.0 7 5330.0 8 5622.0 9 6267.0 10 6622.0 11 7127.0 12 7676.0 13 7872.0 14 8840.0 15 9732.0 16 10620.0 17 11496.0 18 10577.0 19 9284.0 20 8987.0 21 8671.0 22 9171.0 23 10481.0 24 12065.0 25 14593.0 26 17570.0 27 20905.0 28 25177.0 29 30379.0 30 36963.0 31 46039.0 32 58561.0 33 78248.0 34 113064.0 35 167699.0 36 292546.0 37 564101.0 38 586745.0 39 70414.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.09846776206939 20.18589122422468 14.348619039357486 25.367021974348447 2 14.907192648936077 21.047812254787416 37.76927695748571 26.2757181387908 3 17.77279233009204 25.10920398251722 29.043420864140824 28.074582823249916 4 13.148572672127647 17.292735850850523 35.516768540683756 34.04192293633807 5 14.282429616605452 37.58458475804849 33.88255134257831 14.250434282767744 6 33.1076609996459 35.712879211073634 17.076108001578664 14.1033517877018 7 28.9313281272118 32.01752069342463 20.7829211268784 18.268230052485176 8 26.925565139640632 34.848358721322576 19.520869928617277 18.70520621041952 9 26.730283134551236 15.958147164386721 19.287764865556937 38.0238048355051 10-11 25.665126807839663 25.660579980594566 27.398461945805202 21.275831265760573 12-13 26.161390010823677 22.93243622683701 27.475780892316166 23.430392870023155 14-15 23.490209401915273 24.493567168430065 24.717657727553547 27.29856570210112 16-17 23.603856716019326 27.709054400603744 25.47394481387221 23.213144069504725 18-19 23.638916237423782 26.976806094896833 26.814419180501737 22.569858487177648 20-21 24.09771480593883 26.005779273337826 26.8895090575542 23.006996863169142 22-23 24.047499073026497 25.668936827416022 26.606072706414025 23.67749139314346 24-25 23.811699980034167 26.014808523404927 26.55390722963987 23.619584266921045 26-27 23.51695859753177 26.28337002937021 26.602362505010007 23.597308868088014 28-29 23.677517679052904 26.427038529126463 26.40400806193125 23.491435729889385 30-31 24.13225931121686 26.00343032876344 26.28569182698921 23.57861853303049 32-33 23.82759450612587 26.09201408735521 26.214318059212623 23.8660733473063 34-35 24.07908774363106 26.224010943628016 26.27489188328572 23.422009429455205 36-37 24.03009434590117 26.11009874047007 26.38277328989471 23.47703362373405 38-39 23.921747590661177 26.259833577885317 26.249227522080986 23.56919130937252 40-41 24.114363926247737 26.01880950600115 26.271063608431653 23.595762959319458 42-43 23.946713241587894 25.99128241546692 26.11108634271149 23.950918000233692 44-45 23.78915612118359 26.016823611965386 26.261860697146037 23.93215956970499 46-47 24.030417110120986 25.98592651895914 26.03224227195672 23.951414098963156 48-49 23.738669381429947 26.24868440264115 26.04518280596394 23.967463409964964 50-51 23.87274500933996 26.203519159853883 26.122405945964104 23.801329884842055 52-53 24.17362037656201 25.972869703375284 26.013054910275223 23.840455009787483 54-55 23.575855595850925 25.955519685280592 26.315325774517994 24.153298944350485 56-57 23.702329551637106 26.077582700614954 26.071370844632817 24.14871690311512 58-59 23.793463378353252 26.071455737926602 26.16444666069406 23.97063422302608 60-61 23.843418099544834 26.132367812419844 26.266052397934235 23.758161690101087 62-63 23.81188951512836 25.995941934415036 26.29896557786651 23.893202972590096 64-65 23.525573922454925 25.80107994916643 26.30556909947947 24.367777028899177 66-67 23.6140955789156 26.02469311146435 26.06692126140852 24.29429004821153 68-69 23.574810784171596 26.023722404836285 26.175944620953366 24.225522190038753 70-71 23.552006202162517 25.83871545233366 26.1659226424797 24.443355703024125 72-73 23.541123069227485 26.096248525194216 25.93551239344046 24.42711601213784 74-75 23.492292931982536 26.122797452250836 26.020600081994584 24.364309533772047 76-77 23.540147144714044 25.73486591076869 26.207171557725562 24.517815386791707 78-79 23.430301390251326 25.757661604032066 26.23327723843994 24.578759767276665 80-81 23.636962821521784 26.00016023110483 25.91649338243423 24.44638356493915 82-83 23.57149634409484 25.92771195342892 26.06473047354015 24.436061228936097 84-85 23.552367207116806 25.9547310221987 25.9366824376917 24.55621933299279 86-87 23.323377084162374 26.140841949372412 25.963227989930132 24.572552976535082 88-89 23.245623976202243 25.876692860778753 26.0384457571745 24.8392374058445 90-91 23.275446780634063 25.810391603705263 26.101212559345218 24.81294905631546 92-93 23.411883848981606 25.629459962826907 26.153108929258035 24.805547258933455 94-95 23.28184784062436 25.577006494300875 26.105475289139747 25.03567037593502 96-97 23.13486874147286 25.46200537834459 26.23708370072536 25.166042179457193 98-99 22.87641202442882 25.39032574436447 26.1855554226851 25.54770680852161 100-101 22.94960361049013 25.539155440930113 26.18822305986968 25.323017888710076 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 60.0 1 44.5 2 45.5 3 63.0 4 61.5 5 69.0 6 125.0 7 302.0 8 469.0 9 496.5 10 410.5 11 318.0 12 318.5 13 343.0 14 375.0 15 435.0 16 481.5 17 518.5 18 594.5 19 668.0 20 753.0 21 846.5 22 979.0 23 1180.5 24 1418.5 25 1773.0 26 2388.0 27 3253.5 28 4309.0 29 6100.0 30 9003.5 31 13104.5 32 18943.5 33 24641.5 34 30087.0 35 36706.0 36 45377.0 37 53643.5 38 59662.5 39 65342.0 40 69325.0 41 72580.5 42 76563.0 43 81537.0 44 86268.5 45 91266.0 46 95435.5 47 98864.5 48 103260.0 49 104602.0 50 103120.5 51 101990.0 52 101196.5 53 100035.5 54 98221.0 55 93049.0 56 85157.5 57 76133.0 58 68063.0 59 59256.5 60 48741.0 61 40445.5 62 33127.0 63 25038.5 64 17663.5 65 12791.0 66 9560.0 67 7137.0 68 5457.5 69 4296.0 70 3229.5 71 2335.5 72 1615.0 73 1142.0 74 855.0 75 585.0 76 400.5 77 233.0 78 121.0 79 69.5 80 41.0 81 33.0 82 20.0 83 10.5 84 8.5 85 3.5 86 2.0 87 3.5 88 2.5 89 1.0 90 1.5 91 1.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14231519096349243 2 3.802959378478123E-4 3 0.0057044390677171855 4 0.00392972469109406 5 0.02569110335682999 6 8.451020841062496E-4 7 2.112755210265624E-4 8 0.0016479490640071868 9 0.0 10-11 0.0968486988385762 12-13 2.746581773345311E-4 14-15 0.005239632921458747 16-17 2.112755210265624E-4 18-19 3.380408336424998E-4 20-21 7.394643235929684E-4 22-23 2.3240307312921864E-4 24-25 0.001500056199288593 26-27 0.002725454221242655 28-29 0.006232627870283592 30-31 0.0140498221482664 32-33 0.014472373190319526 34-35 0.011387750583331713 36-37 8.662296362089059E-4 38-39 2.3240307312921864E-4 40-41 0.0048593369836109354 42-43 0.00893695453942359 44-45 0.008514403497370465 46-47 0.008979209643628902 48-49 0.010880689332867965 50-51 0.005598801307203903 52-53 0.001500056199288593 54-55 0.0010775051572354682 56-57 0.005725566619819841 58-59 0.00921161271675812 60-61 0.007901704486393433 62-63 0.018000674391463117 64-65 0.034585802792048266 66-67 0.03623375185605545 68-69 0.026578460545141548 70-71 0.040205731651354826 72-73 0.024867128824826397 74-75 0.02400089918861749 76-77 0.23244532823342395 78-79 0.0649883502677706 80-81 0.052586477183511386 82-83 0.020050046945420775 84-85 0.03133215976823921 86-87 0.0802424428858884 88-89 0.261453457270371 90-91 0.3124553680461831 92-93 0.048910283117649195 94-95 0.005007229848329529 96-97 0.009993332144556402 98-99 0.001225398021954062 100-101 0.0012465255740567182 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2366578.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.66579299959957 #Duplication Level Percentage of deduplicated Percentage of total 1 78.03121387084812 45.77763040454657 2 12.051006451086604 14.139636997925715 3 3.9824408315995763 7.008991483793216 4 1.8192118255669825 4.2690201752454495 5 1.0385739508114251 3.0464382206539677 6 0.6604183000237241 2.324637796940354 7 0.4657229159769955 1.9125402928713418 8 0.33309558272387363 1.563305320412781 9 0.25036194381039767 1.3218913773502348 >10 1.2798567827234444 13.242968738310887 >50 0.06513401294762404 2.577885175871221 >100 0.021589707632502286 2.1607802022916798 >500 9.399850122552419E-4 0.3460558722040861 >1k 4.3383923642442213E-4 0.3082179415824635 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.225510420531248E-5 2 0.0 0.0 0.0 0.0 4.225510420531248E-5 3 0.0 0.0 0.0 0.0 4.225510420531248E-5 4 0.0 0.0 0.0 0.0 4.225510420531248E-5 5 0.0 0.0 0.0 0.0 4.225510420531248E-5 6 0.0 0.0 0.0 0.0 1.2676531261593743E-4 7 0.0 0.0 0.0 0.0 1.2676531261593743E-4 8 0.0 0.0 0.0 0.0 1.690204168212499E-4 9 0.0 0.0 0.0 4.225510420531248E-5 1.690204168212499E-4 10-11 0.0 0.0 0.0 4.225510420531248E-5 1.690204168212499E-4 12-13 0.0 0.0 0.0 4.225510420531248E-5 2.1127552102656242E-4 14-15 0.0 0.0 0.0 4.225510420531248E-5 2.3240307312921864E-4 16-17 0.0 0.0 0.0 4.225510420531248E-5 2.5353062523187487E-4 18-19 0.0 0.0 0.0 4.225510420531248E-5 2.5353062523187487E-4 20-21 0.0 0.0 0.0 8.451020841062496E-5 2.5353062523187487E-4 22-23 0.0 0.0 0.0 2.3240307312921864E-4 3.1691328153984357E-4 24-25 0.0 0.0 0.0 5.915714588743747E-4 4.2255104205312483E-4 26-27 0.0 0.0 0.0 0.0010986327093381245 4.2255104205312483E-4 28-29 0.0 0.0 0.0 0.0023451582833948427 4.2255104205312483E-4 30-31 0.0 0.0 0.0 0.007986214694804058 4.436785941557811E-4 32-33 0.0 0.0 0.0 0.0240431542928228 4.648061462584373E-4 34-35 0.0 0.0 0.0 0.044938303322349826 4.648061462584373E-4 36-37 0.0 0.0 0.0 0.076333845746897 5.070612504637497E-4 38-39 0.0 0.0 0.0 0.12672305751173213 5.493163546690622E-4 40-41 0.0 0.0 0.0 0.18549990746132178 5.493163546690622E-4 42-43 0.0 0.0 0.0 0.24945300767606224 5.493163546690622E-4 44-45 0.0 0.0 0.0 0.3299067260829772 5.704439067717185E-4 46-47 0.0 0.0 0.0 0.42398771559610543 5.915714588743747E-4 48-49 0.0 0.0 0.0 0.5211533277162215 5.915714588743747E-4 50-51 0.0 0.0 0.0 0.6227345982257926 5.915714588743747E-4 52-53 0.0 0.0 0.0 0.7293019710315908 6.760816672849996E-4 54-55 0.0 4.225510420531248E-5 0.0 0.858665972556155 7.183367714903121E-4 56-57 0.0 4.225510420531248E-5 0.0 1.0100237558195841 7.394643235929684E-4 58-59 0.0 4.225510420531248E-5 0.0 1.1696212844030494 7.817194277982809E-4 60-61 0.0 4.225510420531248E-5 0.0 1.3415995585186713 8.028469799009372E-4 62-63 0.0 4.225510420531248E-5 0.0 1.5184794247221092 8.873571883115621E-4 64-65 0.0 4.225510420531248E-5 0.0 1.718662980894777 8.873571883115621E-4 66-67 0.0 4.225510420531248E-5 0.0 1.9546366103293447 8.873571883115621E-4 68-69 0.0 4.225510420531248E-5 0.0 2.2107447969177434 8.873571883115621E-4 70-71 0.0 4.225510420531248E-5 0.0 2.4825930098226214 9.507398446195308E-4 72-73 0.0 4.225510420531248E-5 0.0 2.764371172215748 0.0010775051572354682 74-75 0.0 4.225510420531248E-5 0.0 3.0681008612435337 0.0010986327093381245 76-77 0.0 4.225510420531248E-5 0.0 3.4153533076027918 0.0011197602614407807 78-79 0.0 4.225510420531248E-5 0.0 3.8052622816573125 0.001140887813543437 80-81 8.451020841062496E-5 4.225510420531248E-5 0.0 4.215052282240434 0.0011831429177487495 82-83 8.451020841062496E-5 4.225510420531248E-5 0.0 4.642652809246092 0.0012676531261593745 84-85 8.451020841062496E-5 4.225510420531248E-5 0.0 5.09186682205277 0.0012676531261593745 86-87 8.451020841062496E-5 4.225510420531248E-5 0.0 5.5846247197430205 0.0012887806782620307 88-89 8.451020841062496E-5 4.225510420531248E-5 0.0 6.118771492002376 0.001309908230364687 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2335 0.0 53.927578 1 GTATCAA 4300 0.0 43.76014 1 TCAACGC 5495 0.0 33.67986 4 TATCAAC 5730 0.0 32.547028 2 CAACGCA 5735 0.0 32.326427 5 ATCAACG 5795 0.0 32.18196 3 AACGCAG 6255 0.0 29.866383 6 ACGCAGA 7365 0.0 24.655169 7 CGCAGAG 7760 0.0 22.787601 8 CCCTATA 470 0.0 22.212538 2 GTACATG 7770 0.0 22.199211 1 TACATGG 8345 0.0 20.414627 2 GCAGAGT 8460 0.0 19.665956 9 ACATGGG 8380 0.0 19.026928 3 GTATATA 690 0.0 18.593735 1 GGACCGT 335 7.2577677E-10 18.446583 6 AGAGTAC 7205 0.0 18.440182 10-11 TAAGTAC 1500 0.0 18.056581 1 GTGTAGC 1315 0.0 17.706074 1 CAGAGTA 7715 0.0 17.529264 10-11 >>END_MODULE