##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921363_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1637136 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.633478220502145 31.0 31.0 34.0 27.0 34.0 2 30.69042339793395 33.0 31.0 34.0 27.0 34.0 3 30.719077706433673 33.0 31.0 34.0 27.0 34.0 4 34.193597844039836 37.0 35.0 37.0 30.0 37.0 5 34.20139744040813 37.0 35.0 37.0 30.0 37.0 6 34.24900802376834 37.0 35.0 37.0 30.0 37.0 7 34.18350094311041 37.0 35.0 37.0 30.0 37.0 8 34.15354802533204 37.0 35.0 37.0 30.0 37.0 9 35.73316755602467 39.0 37.0 39.0 30.0 39.0 10-11 35.63542735606572 39.0 37.0 39.0 30.0 39.0 12-13 35.523978459944686 39.0 37.0 39.0 30.0 39.0 14-15 36.66931244563677 40.0 37.0 41.0 30.0 41.0 16-17 36.61182943872714 40.0 37.0 41.0 30.0 41.0 18-19 36.585807165684464 40.0 37.0 41.0 30.0 41.0 20-21 36.53358853510032 40.0 37.0 41.0 29.0 41.0 22-23 36.42117698224216 40.0 37.0 41.0 29.0 41.0 24-25 36.318771317715814 40.0 37.0 41.0 28.5 41.0 26-27 36.16447564527321 40.0 36.0 41.0 28.0 41.0 28-29 36.025811539175734 40.0 36.0 41.0 27.0 41.0 30-31 35.85232717379619 40.0 36.0 41.0 27.0 41.0 32-33 35.64806466903177 40.0 35.5 41.0 26.5 41.0 34-35 35.47909917074696 39.0 35.0 41.0 25.5 41.0 36-37 35.2981862838518 39.0 35.0 41.0 25.0 41.0 38-39 35.50887892026075 39.5 35.0 41.0 26.0 41.0 40-41 35.609554429198305 40.0 35.0 41.0 26.0 41.0 42-43 35.40847003547659 40.0 35.0 41.0 25.0 41.0 44-45 35.24841522023827 40.0 35.0 41.0 24.0 41.0 46-47 35.04925125340839 40.0 35.0 41.0 23.0 41.0 48-49 34.87402909715503 40.0 35.0 41.0 22.5 41.0 50-51 33.143352171108575 37.0 32.5 39.5 18.5 40.0 52-53 33.2990087567557 37.5 33.5 39.5 18.5 40.0 54-55 34.15096332864222 39.0 34.0 40.5 19.0 41.0 56-57 34.1624516839163 39.0 34.0 41.0 18.0 41.0 58-59 33.983046307698324 38.5 34.0 41.0 18.0 41.0 60-61 33.73642812814573 38.0 34.0 40.5 14.5 41.0 62-63 33.45184731140235 37.0 34.0 40.0 13.0 41.0 64-65 33.16275526284927 37.0 33.5 40.0 9.5 41.0 66-67 32.82608744783573 36.0 33.0 39.5 7.5 41.0 68-69 32.46226306183481 36.0 33.0 39.0 4.5 41.0 70-71 32.08093310512994 35.0 33.0 39.0 2.0 41.0 72-73 31.719063962920615 35.0 32.5 37.5 2.0 40.0 74-75 31.31695137117503 35.0 32.0 37.0 2.0 39.0 76-77 30.93906279014083 35.0 32.0 37.0 2.0 39.0 78-79 30.587515331652348 35.0 32.0 36.0 2.0 39.0 80-81 30.236759194104827 35.0 31.0 36.0 2.0 37.0 82-83 29.928310781755457 35.0 31.0 35.0 2.0 37.0 84-85 29.682477204093 35.0 31.0 35.0 2.0 36.5 86-87 29.44653284760704 35.0 31.0 35.0 2.0 36.0 88-89 29.228546376110476 35.0 31.0 35.0 2.0 36.0 90-91 28.96541826702241 35.0 30.0 35.0 2.0 35.5 92-93 28.768206795281515 34.5 30.0 35.0 2.0 35.0 94-95 28.555354900264852 34.0 30.0 35.0 2.0 35.0 96-97 28.295118120913596 34.0 30.0 35.0 2.0 35.0 98-99 28.049817791557942 34.0 29.5 35.0 2.0 35.0 100-101 26.99869497708193 33.5 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 49141.0 3 8683.0 4 6058.0 5 4834.0 6 4240.0 7 4465.0 8 4763.0 9 5208.0 10 5578.0 11 6195.0 12 6231.0 13 6636.0 14 7413.0 15 8223.0 16 9281.0 17 10255.0 18 9038.0 19 7418.0 20 7175.0 21 7428.0 22 7955.0 23 9037.0 24 10600.0 25 12432.0 26 14761.0 27 17115.0 28 20446.0 29 23566.0 30 28291.0 31 34641.0 32 43302.0 33 55907.0 34 79608.0 35 116090.0 36 188377.0 37 343618.0 38 379561.0 39 73558.0 40 8.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.19941430157724 18.894029775040227 13.997116730844564 23.909439192537967 2 16.7265928727847 20.266425617246036 38.58917636762237 24.417805142346896 3 19.5041418274152 24.13919962355357 29.68194554360148 26.67471300542975 4 14.165088856483852 16.641751729887044 35.73413093726203 33.45902847636707 5 14.681617682107792 36.98830212800804 33.62029032624731 14.709789863636862 6 32.811274324129485 34.48607448932463 17.452830188679243 15.249820997866637 7 28.284926378501616 32.38594501999528 20.92100488366325 18.40812371783985 8 26.7713884753061 33.61793666959721 20.26471470526601 19.345960149830674 9 27.120998841625244 15.77075910203962 19.882439625214445 37.22580243112069 10-11 25.584582289354564 25.507662361227958 27.35771187957724 21.55004346984024 12-13 26.310674836430092 23.386350034872308 27.121795848988704 23.1811792797089 14-15 23.946703691063025 24.95073785511292 24.912483114595865 26.19007533922819 16-17 23.45169538904283 27.622086646768235 25.972492507538288 22.95372545665065 18-19 23.30538647767281 26.77912615798196 27.643681408900328 22.2718059554449 20-21 24.028278914264188 25.7648867703939 27.748791544431118 22.458042770910794 22-23 24.02377104556117 25.516626684645587 27.300280103314645 23.159322166478596 24-25 23.761056052367525 25.94232336898402 27.168312318125874 23.128308260522576 26-27 23.198240033434722 26.241215137032253 27.340461022765183 23.220083806767843 28-29 23.29883907199073 26.490963432172894 27.157724185205957 23.052473310630415 30-31 23.947370430612512 25.859629027208236 27.110581659068522 23.082418883110734 32-33 23.56701360932359 26.004419151039176 26.83821777605644 23.590349463580797 34-35 23.920397292696702 26.26899115108039 26.898992931799086 22.911618624423824 36-37 23.82415614330484 26.09984109206978 27.031756847349737 23.044245917275642 38-39 23.601039450366795 26.187967274662054 26.989362982347792 23.22163029262336 40-41 23.8600538888614 25.896737653116265 26.99140478158274 23.251803676439597 42-43 23.6409988469851 25.945834928791307 26.698829875053832 23.714336349169766 44-45 23.514804372000736 26.071105295594766 26.79698741020954 23.61710292219496 46-47 23.663071124050045 26.025712000984193 26.456203940621677 23.85501293434409 48-49 23.377113404144044 26.320402304566443 26.633979777665097 23.668504513624416 50-51 23.653376363026005 26.17071130885076 26.76278780263668 23.413124525486555 52-53 23.803958400469085 26.031442331498063 26.614830980100884 23.54976828793197 54-55 23.262291715694392 26.00329466301926 26.852574693768634 23.88183892751772 56-57 23.392662138603775 26.116049567108046 26.52136547050067 23.96992282378751 58-59 23.457845790546937 26.0585568560097 26.770418036346545 23.71317931709682 60-61 23.576118524086567 26.00085880809312 26.98655992879789 23.43646273902242 62-63 23.519373097473622 25.862759176657896 27.061737191364543 23.556130534503943 64-65 23.216998698641962 25.758411388290714 26.976338054377912 24.04825185868941 66-67 23.346429367105962 26.065320217305615 26.592425885711346 23.995824529877076 68-69 23.30447555657563 25.95749368831765 26.85101369443807 23.887017060668654 70-71 23.217461279090404 25.7768047829732 26.795848555500477 24.209885382435914 72-73 23.18103177629119 26.12751274925536 26.644031243249 24.04742423120445 74-75 23.251337192935214 26.185420007099058 26.632079166717666 23.93116363324806 76-77 23.1732557506207 25.78175823005665 26.71000911237845 24.334976906944195 78-79 23.13110500190071 25.946759272012287 26.72730578312058 24.194829942966418 80-81 23.412405312740763 26.115394257437924 26.451182590186107 24.021017839635206 82-83 23.397996767083388 25.99427796410122 26.74162592871361 23.866099340101787 84-85 23.347677974038852 26.168664815942748 26.476360419810298 24.0072967902081 86-87 23.13755381985101 26.38512743040728 26.41405583948253 24.06326291025918 88-89 23.02735780035571 26.074368401235493 26.5935757995047 24.304697998904096 90-91 23.215808096840544 25.874827159016156 26.719739090852602 24.189625653290705 92-93 23.41528508107979 25.70800744628125 26.692701915785754 24.1840055568532 94-95 23.27879834218199 25.73671530493497 26.642195981227236 24.342290371655807 96-97 23.24325416580176 25.604196632333593 26.722669934034197 24.42987926783045 98-99 22.944720593678163 25.637652680151024 26.662342023743086 24.75528470242773 100-101 23.220937662362314 25.695197734145403 26.744205626733457 24.339658976758823 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 156.0 1 128.5 2 118.0 3 132.5 4 111.0 5 126.0 6 212.5 7 425.0 8 682.0 9 792.0 10 714.0 11 613.5 12 646.5 13 698.0 14 729.0 15 805.5 16 924.5 17 1032.5 18 1134.5 19 1242.5 20 1362.5 21 1517.0 22 1686.0 23 1947.0 24 2249.0 25 2575.5 26 3197.5 27 4078.0 28 5228.0 29 6991.5 30 9440.0 31 12479.5 32 17170.0 33 21238.5 34 24299.5 35 28477.0 36 33420.5 37 38293.0 38 41434.0 39 44328.0 40 47014.0 41 48816.5 42 51043.5 43 53816.0 44 56511.5 45 60394.0 46 63146.5 47 65036.5 48 67718.0 49 68964.5 50 69411.5 51 68754.0 52 67426.0 53 66395.0 54 64814.0 55 61428.0 56 56621.0 57 51043.0 58 45344.5 59 38835.5 60 32073.0 61 26832.5 62 22294.5 63 17368.5 64 12666.0 65 9308.0 66 7046.0 67 5515.5 68 4372.5 69 3460.5 70 2685.0 71 1940.0 72 1450.5 73 1166.0 74 922.5 75 721.5 76 570.0 77 421.0 78 269.0 79 176.5 80 126.5 81 84.0 82 61.5 83 51.5 84 47.0 85 36.0 86 24.5 87 22.0 88 17.5 89 17.0 90 22.5 91 15.5 92 7.5 93 8.5 94 7.0 95 8.0 96 10.5 97 7.0 98 4.5 99 2.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04880474193958229 2 0.05845574222300407 3 0.04770526089463551 4 0.055096216807888905 5 0.04703335581161247 6 0.017347367598049276 7 0.01527057006870535 8 0.021684209497561596 9 0.0219896208989357 10-11 0.022539361421409092 12-13 0.027517567263807042 14-15 0.04504818170268078 16-17 0.029991399614937308 18-19 0.02434128868951633 20-21 0.026845662180784005 22-23 0.047369308353123994 24-25 0.042879760752924614 26-27 0.0313962920612582 28-29 0.02089013985398892 30-31 0.013651889641422584 32-33 0.010383987646719637 34-35 0.009559376863009549 36-37 0.0014965158667331242 38-39 0.007146626792154102 40-41 0.003848183657313748 42-43 0.21943809188729588 44-45 0.1950357209175047 46-47 0.20202964200897178 48-49 0.19848686975303212 50-51 0.19702089502643638 52-53 0.2027626293722696 54-55 0.2004415027218264 56-57 0.21207767711417988 58-59 0.20709947127178194 60-61 0.2123525473754166 62-63 0.2109171137889583 64-65 0.21122252519033238 66-67 0.20206018314910917 68-69 0.19918931597619258 70-71 0.1836133345061131 72-73 0.19051563217716794 74-75 0.19033238533634347 76-77 0.18904965745057223 78-79 0.21604802533204326 80-81 0.22395818062763265 82-83 0.22151488941663977 84-85 0.21629235445314257 86-87 0.23171563022253497 88-89 0.2309521017190997 90-91 0.23031073777621405 92-93 0.23440325055462707 94-95 0.24588671924629354 96-97 0.24536751986395755 98-99 0.235808143000948 100-101 0.24564239012519426 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1637136.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.21763086680068 #Duplication Level Percentage of deduplicated Percentage of total 1 81.84578197078824 54.19633778546306 2 10.770635931058933 14.264119885671212 3 3.1949472270118866 6.346855083515446 4 1.3696392113668072 3.6277705487593295 5 0.7415937106061268 2.4553289291028753 6 0.45883080274529325 1.82296132359034 7 0.3353041536393612 1.5542132671657372 8 0.2306804592001091 1.2220090796397518 9 0.16985789389777137 1.0122828586141337 >10 0.8325464197268158 9.3498399782398 >50 0.03464479747506605 1.536869366825548 >100 0.014057827479554275 1.7418200860275874 >500 0.0012021709408172655 0.5195751345443123 >1k 2.774240632655228E-4 0.35001667284092974 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2285 0.13957301042796688 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2258 0.1379237888605467 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.221645605496428E-4 2 0.0 0.0 0.0 0.0 1.221645605496428E-4 3 0.0 0.0 0.0 0.0 1.221645605496428E-4 4 0.0 0.0 0.0 6.10822802748214E-5 1.221645605496428E-4 5 0.0 0.0 0.0 6.10822802748214E-5 1.221645605496428E-4 6 0.0 0.0 0.0 6.10822802748214E-5 1.221645605496428E-4 7 0.0 0.0 0.0 6.10822802748214E-5 1.221645605496428E-4 8 0.0 0.0 0.0 6.10822802748214E-5 1.832468408244642E-4 9 0.0 0.0 0.0 6.10822802748214E-5 1.832468408244642E-4 10-11 0.0 0.0 0.0 6.10822802748214E-5 1.832468408244642E-4 12-13 0.0 0.0 0.0 6.10822802748214E-5 1.832468408244642E-4 14-15 3.05411401374107E-5 0.0 0.0 6.10822802748214E-5 2.748702612366963E-4 16-17 6.10822802748214E-5 0.0 0.0 6.10822802748214E-5 3.664936816489284E-4 18-19 6.10822802748214E-5 0.0 0.0 6.10822802748214E-5 3.664936816489284E-4 20-21 6.10822802748214E-5 0.0 0.0 6.10822802748214E-5 3.664936816489284E-4 22-23 6.10822802748214E-5 0.0 0.0 2.443291210992856E-4 3.9703482178633906E-4 24-25 6.10822802748214E-5 0.0 0.0 0.0012216456054964279 4.2757596192374977E-4 26-27 6.10822802748214E-5 0.0 0.0 0.0025654557715424986 4.2757596192374977E-4 28-29 6.10822802748214E-5 0.0 0.0 0.006474721709131068 4.2757596192374977E-4 30-31 6.10822802748214E-5 0.0 0.0 0.01890496574505722 4.2757596192374977E-4 32-33 6.10822802748214E-5 0.0 0.0 0.051095327449888095 5.497405224733925E-4 34-35 6.10822802748214E-5 0.0 0.0 0.09812868326150057 6.719050830230354E-4 36-37 6.10822802748214E-5 3.05411401374107E-5 0.0 0.16031044458126875 7.329873632978568E-4 38-39 6.10822802748214E-5 6.10822802748214E-5 0.0 0.24704728257151515 7.329873632978568E-4 40-41 6.10822802748214E-5 6.10822802748214E-5 0.0 0.3441070259282063 7.940696435726781E-4 42-43 6.10822802748214E-5 1.221645605496428E-4 0.0 0.4528334848173884 7.940696435726781E-4 44-45 6.10822802748214E-5 1.221645605496428E-4 0.0 0.6049894449819685 7.940696435726781E-4 46-47 6.10822802748214E-5 1.221645605496428E-4 0.0 0.7776690513188886 7.940696435726781E-4 48-49 6.10822802748214E-5 1.221645605496428E-4 0.0 0.9371548851164473 9.16234204122321E-4 50-51 6.10822802748214E-5 1.221645605496428E-4 0.0 1.089066516159928 9.16234204122321E-4 52-53 6.10822802748214E-5 1.221645605496428E-4 0.0 1.2538359672012587 9.773164843971424E-4 54-55 6.10822802748214E-5 1.221645605496428E-4 0.0 1.4567513022742156 0.0010383987646719638 56-57 6.10822802748214E-5 1.221645605496428E-4 0.0 1.7051423950117766 0.0010383987646719638 58-59 6.10822802748214E-5 1.221645605496428E-4 0.0 1.9561294846610178 0.0010689399048093744 60-61 6.10822802748214E-5 1.221645605496428E-4 0.0 2.200519688040578 0.001099481044946785 62-63 6.10822802748214E-5 1.221645605496428E-4 0.0 2.4510181194476206 0.001099481044946785 64-65 6.10822802748214E-5 1.221645605496428E-4 0.0 2.7529783719862 0.001099481044946785 66-67 6.10822802748214E-5 1.832468408244642E-4 0.0 3.1224040030883202 0.001099481044946785 68-69 6.10822802748214E-5 1.832468408244642E-4 0.0 3.518766919791636 0.001099481044946785 70-71 6.10822802748214E-5 1.832468408244642E-4 0.0 3.898851408801712 0.0011605633252216065 72-73 6.10822802748214E-5 1.832468408244642E-4 0.0 4.285563325221607 0.0014354335864583028 74-75 6.10822802748214E-5 1.832468408244642E-4 0.0 4.726149812843893 0.0014659747265957136 76-77 6.10822802748214E-5 1.832468408244642E-4 0.0 5.2589400025410225 0.0014659747265957136 78-79 6.10822802748214E-5 1.832468408244642E-4 0.0 5.849727817359096 0.0014659747265957136 80-81 6.10822802748214E-5 1.832468408244642E-4 0.0 6.431780866097869 0.0014659747265957136 82-83 6.10822802748214E-5 1.832468408244642E-4 0.0 7.013436880014855 0.0014659747265957136 84-85 6.10822802748214E-5 2.443291210992856E-4 0.0 7.63769778442353 0.0014659747265957136 86-87 6.10822802748214E-5 2.443291210992856E-4 0.0 8.339197232239716 0.0014659747265957136 88-89 6.10822802748214E-5 2.443291210992856E-4 0.0 9.105627143988038 0.0014659747265957136 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2425 0.0 64.37953 1 GTATCAA 4600 0.0 42.39822 1 TCAACGC 5695 0.0 33.830563 4 ATCAACG 5750 0.0 33.506966 3 TATCAAC 5850 0.0 32.69184 2 CAACGCA 5900 0.0 32.57168 5 AACGCAG 6135 0.0 31.236183 6 GTGGTAT 905 0.0 28.314495 1 ACGCAGA 7030 0.0 26.587967 7 GTACATG 6435 0.0 26.178423 1 CGCAGAG 7110 0.0 26.0243 8 TACATGG 6690 0.0 24.3309 2 GCAGAGT 7405 0.0 23.642061 9 ACATGGG 6820 0.0 23.448898 3 GAGTACT 3295 0.0 22.318258 12-13 CATGGGG 5265 0.0 21.631659 4 CAGAGTA 7145 0.0 21.281872 10-11 TGGTATC 1160 0.0 21.273333 2 GTACTTT 3340 0.0 21.23597 14-15 ATGGGGG 3630 0.0 19.738195 5 >>END_MODULE